prot_H-elongata_contig68906.14532.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68906.14532.1
Unique Nameprot_H-elongata_contig68906.14532.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length56
Homology
BLAST of mRNA_H-elongata_contig68906.14532.1 vs. uniprot
Match: A0A5K1K0E1_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1K0E1_9APHY)

HSP 1 Score: 56.2 bits (134), Expect = 8.870e-8
Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    1 MSEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKTDKDG 56
            + EAQAS +WPQW+RAI  EM+   A G + +V +P G  V+G+++VF RK + +G
Sbjct:  325 LREAQASPDWPQWERAIEVEMENLRAHGTYDLVVKPPGAHVIGSKLVFHRKRNAEG 380          
BLAST of mRNA_H-elongata_contig68906.14532.1 vs. uniprot
Match: A0A1M2V8C6_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V8C6_TRAPU)

HSP 1 Score: 54.7 bits (130), Expect = 3.120e-7
Identity = 26/56 (46.43%), Postives = 36/56 (64.29%), Query Frame = 0
Query:    1 MSEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKTDKDG 56
            + EAQ + +WP+W+ AI  EMD   A   + +V RP G  V+G+R+VF RK D DG
Sbjct:  991 LREAQEAPDWPKWEEAITVEMDNLRAHSTYDLVVRPVGAHVIGSRLVFHRKRDADG 1046          
BLAST of mRNA_H-elongata_contig68906.14532.1 vs. uniprot
Match: A0A5K1K150_9APHY (Uncharacterized protein n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1K150_9APHY)

HSP 1 Score: 53.9 bits (128), Expect = 5.840e-7
Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    1 MSEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKTDKDG 56
            + EAQ + +WPQW+RAI  EM+     G +++V +P G  V+G+++VF RK D  G
Sbjct:  976 LREAQEAPDWPQWERAIEVEMENLRVHGTYELVPKPPGAHVIGSKLVFHRKRDAQG 1031          
BLAST of mRNA_H-elongata_contig68906.14532.1 vs. uniprot
Match: A0A1X7VXK3_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VXK3_AMPQE)

HSP 1 Score: 50.8 bits (120), Expect = 3.390e-6
Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    1 MSEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKTDKDG 56
            ++EA +SSE  +WK A+ REM+   A  V+ +VE PK K V+G++ +F+RK + DG
Sbjct:    9 INEALSSSEADKWKEAMEREMESLKANDVYDLVELPKNKEVIGSKWIFRRKINADG 64          
BLAST of mRNA_H-elongata_contig68906.14532.1 vs. uniprot
Match: A0A177UTI3_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177UTI3_9BASI)

HSP 1 Score: 50.4 bits (119), Expect = 9.790e-6
Identity = 21/55 (38.18%), Postives = 36/55 (65.45%), Query Frame = 0
Query:    2 SEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKTDKDG 56
            ++A+  +EW +W+ A+  E+      G W++VE P  + ++G+R VFK KTD+DG
Sbjct:  634 AQARPPAEWTKWQEAMHEEIGSLREMGTWELVEAPPNRNIVGSRWVFKLKTDRDG 688          
BLAST of mRNA_H-elongata_contig68906.14532.1 vs. uniprot
Match: A0A2G8RTP0_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RTP0_9APHY)

HSP 1 Score: 49.3 bits (116), Expect = 2.510e-5
Identity = 21/56 (37.50%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    1 MSEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKTDKDG 56
            + EAQ + +W +W++AI+ EM+   A G +++V +P G  V+G+++VF RK + +G
Sbjct: 1003 LREAQEAPDWVEWEKAISVEMENLKAHGTYELVAKPHGAHVIGSKLVFHRKRNAEG 1058          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68906.14532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A5K1K0E1_9APHY8.870e-846.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1M2V8C6_TRAPU3.120e-746.43Retrovirus-related Pol polyprotein from transposon... [more]
A0A5K1K150_9APHY5.840e-742.86Uncharacterized protein n=1 Tax=Ganoderma boninens... [more]
A0A1X7VXK3_AMPQE3.390e-644.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177UTI3_9BASI9.790e-638.18Integrase catalytic domain-containing protein n=2 ... [more]
A0A2G8RTP0_9APHY2.510e-537.50Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68906contigH-elongata_contig68906:288..455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68906.14532.1mRNA_H-elongata_contig68906.14532.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68906 276..455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68906.14532.1 ID=prot_H-elongata_contig68906.14532.1|Name=mRNA_H-elongata_contig68906.14532.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp
MSEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKR
KTDKDG
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