prot_H-elongata_contig68793.14516.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68793.14516.1
Unique Nameprot_H-elongata_contig68793.14516.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length707
Homology
BLAST of mRNA_H-elongata_contig68793.14516.1 vs. uniprot
Match: A0A6H5KHX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX5_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 2.150e-18
Identity = 161/440 (36.59%), Postives = 187/440 (42.50%), Query Frame = 0
Query:  347 EYTHSHGQLGVPHRPQLQHFVQGEGSAAAMMQR----RPLPRDDVRSSPQGYRDHAPLQQPRGYGSTTEYGFLAPHVNQLGSSHGYGLAA-GGQSDVPNVPVSGVLGERGSLRPPQPRIPVQHPRARRPLPPST-------PPVRGVSVMDAG-----LEGGKQGESLSPFLGHQPHQPSSQHLRPPLPPSVSSAFSQPFQPLDW---------------------------------EIGQSAHGDV-----GAGIGGGGHSHGYGAQRS--------VQYSHQQGGDMG-GDDD--RGGAEAAGAGTLDMIRSGGAGVAGAGXXXXXGGRLPGGGDLGQNIVQQHF--------GRDVSPGPF--AGSEVNGGXXXXXSHGTVATARVGMSSPP--GSINDASVSGSIGATVGRPLSPLMATLG-DSGGSPPDLPRLR 707
            EY+H    LG+P     QH          M       RPL RD        YRD    QQ   YG    YGFL PH++  GS  GYG  A GG +      V    G  G L           P ARRP PPS        P + G  +MD       ++ G+QG SLSPF+GHQ    SS HLR PLPP+++  F   FQ LDW                                 EIG    G       G G+ GGG + G G   S        V Y HQ+ GDMG G DD  RGG  A G   LDM  SGG       XXXX G RLPG  DLGQ ++  HF        GRD SPGPF   G+EV    XXXX                  G+  +        A  GRP+SPLM+TLG +SG +PP L RLR
Sbjct:  625 EYSHP---LGIPPPRSSQHXXXXXXXXXXMTGGGGGLRPLARDS-----HFYRDQLQQQQQHLYGPNP-YGFL-PHMSS-GSQGGYGPGAIGGDNGEGLSDVVFSCGVGGVLF---------MPHARRPFPPSPGRSGGGIPGMPGGXMMDXXXXXXXMDVGRQGGSLSPFIGHQ-SSASSSHLRLPLPPAMNGPFQSSFQALDWDDPSGSGXXXXXXXXXXXXXXXXXXXWWPSLPLEIGDDPWGAASTERRGVGMQGGGSAGGDGGWPSEAAVPLSHVDYPHQEAGDMGMGRDDGRRGGGPAEGG--LDMEGSGGPXXX---XXXXFGTRLPGV-DLGQGMIP-HFDRMHGIGGGRDSSPGPFHSIGAEVGAASXXXXXXXXXXXXXXXXXXXXXXGAXGETDALNXXXA-AGRPMSPLMSTLGGESGETPPGLARLR 1035          
BLAST of mRNA_H-elongata_contig68793.14516.1 vs. uniprot
Match: D7G0X0_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X0_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 2.370e-15
Identity = 130/346 (37.57%), Postives = 158/346 (45.66%), Query Frame = 0
Query:  427 GYGLAAGGQSDVP-----NVPVSGVLGERGSLRPPQP----RIPVQHPRARRPLPPST-------PPVRGVSVMDAG----LEGGKQGESLSPFLGHQPHQPSSQHLRPPLPPSVSSAFSQPFQPLDWEIGQSAHGDVG---------AGIGGGGHSHGYGAQRS--------VQYSHQQGGDMG--GDDDRGGAEAAGAGTLDMIRSGGAGVAGAGXXXXXGGRLPGGGDLGQNIVQQHF--------GRDVSPGPF--AGSEVNGGXXXXXSHGTVAT---------------ARVGMSSPPGSINDASVSGSIGATVGRPLSPLMATLG-DSGGSPPDLPRLR 707
            GYG  A G  + P     ++PVSGVL  R  L PP      R PV  P ARRPLPPS        P + G  ++D      ++ G+QG SLSPF+GHQ    SS HLR PLPP+++  F   FQ LDW+    +               G+ G           S        V Y HQ+ GDMG   DD R G + A  G LD+   GG       XXXX G RLPG  DLGQ ++  HF        GR  SPGPF   G++V G  XXXX                      A    SS  G   DA    +     GR +SPLM+TLG +SG +PP L RLR
Sbjct:  403 GYGPGAIGGDNGPEIGGGSIPVSGVLSGRAILPPPSQQSSSRGPVAQPHARRPLPPSPGRSGGGIPGMPGSGMLDGXXXXXMDVGRQGGSLSPFIGHQSSSASS-HLRLPLPPAMNGPFQPSFQALDWDDPSGSXXXXXXXXXXXXXXVGVQGXXXXXXXXXWPSEAAVPLSHVDYPHQEAGDMGMGRDDGRRGGDPADGG-LDVEGGGGPXXX---XXXXFGTRLPGV-DLGQGMMP-HFDRMHGIGGGRGSSPGPFHSMGADVGGASXXXXXXXXXXXXXXXXXXXXXXXXXXAMHSSSSGAGGEIDAL---NXXXXXGRSMSPLMSTLGGESGETPPGLARLR 738          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68793.14516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHX5_9PHAE2.150e-1836.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0X0_ECTSI2.370e-1537.57EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68793contigH-elongata_contig68793:733..2853 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68793.14516.1mRNA_H-elongata_contig68793.14516.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68793 733..2853 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68793.14516.1 ID=prot_H-elongata_contig68793.14516.1|Name=mRNA_H-elongata_contig68793.14516.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=707bp
KPIYGYEGEKATFCPMHRLDSMMDVVNRHCEYPGCTKTPSYGFVGERAQF
CSHHHLPDMEDVKNRRCEWHECRRYPIFGHEGERARFCSAHKSEEMVNVR
NRRCEDGNCNKLPTHGLPGEKAKACQAHAHPGMVNLKGRKTAIATNLPKR
EGDVNIRLGAMPPGGVGARSGRPSEHDFDPGVLLGDAGVVGGGGGSGSGL
SGDRQDQMGGYWGLGHRIGGARGAAGAATASISGAGGARGPAGDESDVYS
SNEISLMGWGMRTGGGGMGLAASDSASSTGVLGDRKYSNPDNRLRRLTSD
VALRDQRLRQERDLKEQQIRAMQSSGHHRRVVAPSALDPNFYGSTGEYTH
SHGQLGVPHRPQLQHFVQGEGSAAAMMQRRPLPRDDVRSSPQGYRDHAPL
QQPRGYGSTTEYGFLAPHVNQLGSSHGYGLAAGGQSDVPNVPVSGVLGER
GSLRPPQPRIPVQHPRARRPLPPSTPPVRGVSVMDAGLEGGKQGESLSPF
LGHQPHQPSSQHLRPPLPPSVSSAFSQPFQPLDWEIGQSAHGDVGAGIGG
GGHSHGYGAQRSVQYSHQQGGDMGGDDDRGGAEAAGAGTLDMIRSGGAGV
AGAGGGGGVGGRLPGGGDLGQNIVQQHFGRDVSPGPFAGSEVNGGGGGGG
SHGTVATARVGMSSPPGSINDASVSGSIGATVGRPLSPLMATLGDSGGSP
PDLPRLR
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