prot_H-elongata_contig68654.14500.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68654.14500.1
Unique Nameprot_H-elongata_contig68654.14500.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length618
Homology
BLAST of mRNA_H-elongata_contig68654.14500.1 vs. uniprot
Match: D8LAX0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX0_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 1.740e-64
Identity = 227/734 (30.93%), Postives = 311/734 (42.37%), Query Frame = 0
Query:    1 KKHLQVTVASWPMATDDWTEEHVLPQSDRRPVNLVQNRTASLLRLAKRRPDVVVFVDVSLDAKTFLLSFGRVAPVQIALWGHAPTLGIPSIDYYVVPEALAGDAWRGADSPMSKEEGEEGKEEGTVCPSNSELTLPEDNCYDDDDYLLGDWEA----------GGRYY------------DGGWXXXXXXXXXXXXXXXXXETSASFSCPE------SGGEI--FEDISLDLERQEEFSTAGGV----------SLSVDCDRGLGD--------------------KAFGKKCFERDANG-NVVMGGASSRHSEKSEEKFEQFSQPEEATTMEEKEAVERGGFSF-APAVAAAATVQRIFRQSEGHGDTDLVVDDKDGNDYDIELEEIAA---NAEGAGDEDGDYWGLIPGEKTDRA----------------GGDELRNVPRNGATSIEAETGDRREGGNVSGGKLKGRDLEDQI-KKHITGPGRVIISGKTIQLDTRGEKGGLG----------ADDXXXXXXXXXXYT-------------------------AVHPSLNRQGTMPAGTPTGRTRAASPIATPAAPSSPGEAVSAADRRQGEAPARSPLSPGDNSSPLEDFPHDCHHSEELRNCCCCRGDEWPLPWAGVEYGESVEEQVVLLEGLGAFVTPPGWEGKLGTGELAQAADTAEVRRRRVAHLLPQASCLAVLPIPVHHFHPEFDVAVGMLIDR 617
            ++H +V + SWP  +DDWTEEHVL  ++ R  NLV NRTASL +LA RRPDVVVF D   DAKT+ L+FGRVAPVQIALWGHAPTLGI SIDYYVVPE L  DAW G D           K   + C   +   + ++   ++DD+L   WE           GG  +            DGG                  +   SF  PE      +G  +  F+D     E +  F    G+          + +VD ++ +G                     +A G +      +G  + +G A++   E +EE ++          +        G F+     V   + V  +  + +G  + + +V           L+E A      E  GD +GD  G  P E  +R                 GGD    V R+      A +   R+       K   R  +++I ++H+ GPGR+II G+ + +      GG G          ADD          Y                                        G   G       +         G+       R G+ P       GD+    +D     H+ +     C     +WP PWAGV+Y E+VEEQVV LE LGAFV PPGW G+LG+G LA+ AD +E+RRR   HLLP+ S LAVLPIPV+HFHPEFDVAVGML++R
Sbjct:  422 RQHFEVILGSWPTPSDDWTEEHVLGSTESRSANLVFNRTASLQKLAHRRPDVVVFADAPFDAKTYFLAFGRVAPVQIALWGHAPTLGIGSIDYYVVPEPLVADAWLGDDELQ--------KARDSTCEGEA---IDDE---EEDDFLF--WERPAGPDGSGSDGGMKHRGVRHGSDATASDGGGGGGVSGRHRNDAWQGRRDPPRSFVFPEPPTRDYAGPPLDPFDDDGNGEEPRNAFRCRNGLPPRAGGSGPATGAVDPEKKVGQTSGAAXXXXXXXXXXXXXXVEAGGGRAGSAGRSGMRLKVGMAAAAEMEGAEEDYDXXXXXXXXMNL-------YGIFTDDGDLVEYESLVATLKERGKGREELERIVS--------ALLDEQALLDEQEEEGGDANGDEGGWWPEEGRERGDDSVATKNQHGQHYPYGGD----VERSARIHQHARSRAARDDAQNGAAKSPARSRQEEILRRHVIGPGRLIIGGEEVDVGYSNGGGGDGDNIFGGRGTYADDFDEDDDDQGVYEDGLFVDEYGRVFDXXXXXXXXXXXXXXXXXXXXXXXXXXGVYEGVLYDDDDVE--------GDGGGVYFFRNGDKPL------GDDGGFADDDYFQEHYYDGGDRGCDRSSGDWPRPWAGVDYAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLARLADASEMRRR---HLLPEMSYLAVLPIPVYHFHPEFDVAVGMLLER 1103          
BLAST of mRNA_H-elongata_contig68654.14500.1 vs. uniprot
Match: A0A6H5JPP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP0_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.920e-32
Identity = 71/120 (59.17%), Postives = 87/120 (72.50%), Query Frame = 0
Query:  498 GDNSSPLEDFPHDCHHSEELRNCCCCRGDEWPLPWAGVEYGESVEEQVVLLEGLGAFVTPPGWEGKLGTGELAQAADTAEVRRRRVAHLLPQASCLAVLPIPVHHFHPEFDVAVGMLIDR 617
            GD+    +D     ++  + R C    GD WP PWAG +Y E+VEEQVV LE LGAFV PPGW G+LG+G LA+ AD +E+RRR   HLLP+ S LAVLPIPV+HFHPEFDVAVGML++R
Sbjct: 1160 GDDGGFADDDYFQGYYDGDDRGCDRSSGD-WPRPWAGFDYAETVEEQVVFLESLGAFVQPPGWGGRLGSGRLARLADASEIRRR---HLLPEMSSLAVLPIPVYHFHPEFDVAVGMLLER 1275          
BLAST of mRNA_H-elongata_contig68654.14500.1 vs. uniprot
Match: A0A7S2GDG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GDG3_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 8.630e-8
Identity = 28/55 (50.91%), Postives = 41/55 (74.55%), Query Frame = 0
Query:   45 LAKRRPDVVVFVDVSLDAKTFLLSFGRVAPVQIALWGHAPTLGIP-SIDYYVVPE 98
            LA+ + DV+VF D+ ++  T+ LSF RVAPVQ+ +WGH  T G+  S+DYY++PE
Sbjct:   16 LAEAQLDVLVFCDIGMEPFTYYLSFLRVAPVQVVMWGHPFTSGVEDSVDYYILPE 70          
BLAST of mRNA_H-elongata_contig68654.14500.1 vs. uniprot
Match: A0A813JH33_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JH33_POLGL)

HSP 1 Score: 63.5 bits (153), Expect = 2.930e-7
Identity = 26/50 (52.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:   51 DVVVFVDVSLDAKTFLLSFGRVAPVQIALWGHAPTLGIPSIDYYVVPEAL 100
            DV+VF++V LD ++F+L+  R+APVQ+A +GHA T G+P+ID++V  EA 
Sbjct:  223 DVLVFLEVGLDVRSFVLAHSRLAPVQLATYGHASTTGVPTIDFFVTHEAF 272          
BLAST of mRNA_H-elongata_contig68654.14500.1 vs. uniprot
Match: A0A482SEZ7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEZ7_9ARCH)

HSP 1 Score: 65.1 bits (157), Expect = 2.970e-7
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 0
Query:   32 VNLV-QNRTASLLRLAKRRPDVVVFVDVSLDAKTFLLSFGRVAPVQIALWGHAPTLGIPSIDYYVVPEALAGDA 104
            VNL+  NRT SL R+  +  D++VF D S DA+ F L+  R+A  Q  LW    +LGIPS+DYY++P     +A
Sbjct:  383 VNLIPDNRTLSLERIRVKSLDLIVFADASSDARVFALAHERLARYQAVLWNWGGSLGIPSVDYYLLPVIFVREA 456          
BLAST of mRNA_H-elongata_contig68654.14500.1 vs. uniprot
Match: A0A521W5M1_9PROT (Tetratricopeptide repeat protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521W5M1_9PROT)

HSP 1 Score: 62.4 bits (150), Expect = 2.090e-6
Identity = 25/57 (43.86%), Postives = 41/57 (71.93%), Query Frame = 0
Query:   44 RLAKRRPDVVVFVDVSLDAKTFLLSFGRVAPVQIALWGHAPTLGIPSIDYYVVPEAL 100
            ++ ++RPDV+++ ++ +D  T  L+  R+APVQIA WGH  T G+P+IDYY+  + L
Sbjct:  480 QITQQRPDVLIYPEIGMDPMTLRLASLRLAPVQIATWGHPETTGLPTIDYYLSAQDL 536          
BLAST of mRNA_H-elongata_contig68654.14500.1 vs. uniprot
Match: A0A6C0I759_9ZZZZ (Glyco_transf_41 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0I759_9ZZZZ)

HSP 1 Score: 60.8 bits (146), Expect = 5.250e-6
Identity = 25/63 (39.68%), Postives = 46/63 (73.02%), Query Frame = 0
Query:   33 NLVQNRTASLLRLAKRRPDVVVFVDVSLDAKTFLLSFGRVAPVQIALWGHAPTLGIPSIDYYV 95
            N+V+NR     ++A ++ D++V+ ++ + +K   ++F R+AP+QIA WGH+ T G+P+IDY+V
Sbjct:  251 NIVENRQ----QIADQQFDIIVYPEIGMCSKNRWIAFSRLAPIQIATWGHSDTSGLPNIDYFV 309          
BLAST of mRNA_H-elongata_contig68654.14500.1 vs. uniprot
Match: A0A7S2CTL8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTL8_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 8.090e-6
Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 0
Query:   37 NRTASLLRLAKRRPDVVVFVDVSLDAKTFLLSFGRVAPVQIALWGHAPTLGIPSIDYYVVPEALAGDA 104
            N  A ++R    R DV+++ +V LD   + L++ R+APVQ+A WGH  T G+P+IDY+V  +    DA
Sbjct:  110 NLCADMVRA--HRLDVLIYPEVGLDPVAYFLTYARLAPVQMAWWGHPDTTGVPTIDYFVSTKFEVADA 175          
BLAST of mRNA_H-elongata_contig68654.14500.1 vs. uniprot
Match: A0A2S6TPJ7_9PROT (UDP-glucose:protein N-beta-glucosyltransferase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin2 TaxID=2013075 RepID=A0A2S6TPJ7_9PROT)

HSP 1 Score: 59.3 bits (142), Expect = 1.700e-5
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 0
Query:   23 VLPQSD--RRPVNLVQNRTASL---LRLAKR-----RPDVVVFVDVSLDAKTFLLSFGRVAPVQIALWGHAPTLGIPSIDYYVVPEA 99
            V P+ D  RR ++ +   TA+L   L+ A+      R D + + D+ +D  T+ L+  R+APVQIA WGH  T G+P+IDYY+  +A
Sbjct:  303 VTPRDDDLRREIDALAESTATLPSNLQTARETISAARLDTLFYPDIGMDPVTYFLAQARLAPVQIATWGHPVTTGMPTIDYYLSCDA 389          
BLAST of mRNA_H-elongata_contig68654.14500.1 vs. uniprot
Match: A0A1F4AZP4_9PROT (Glyco_transf_41 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AZP4_9PROT)

HSP 1 Score: 59.3 bits (142), Expect = 1.710e-5
Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   45 LAKRRPDVVVFVDVSLDAKTFLLSFGRVAPVQIALWGHAPTLGIPSIDYYVVPE 98
            +A   P VV++ ++ +D  T  L+  R+APVQIA WGH  T G+P+IDYY+  E
Sbjct:  336 IANEEPHVVIYPEIGMDPMTLRLAALRLAPVQIAAWGHPETTGLPTIDYYLSAE 389          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68654.14500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LAX0_ECTSI1.740e-6430.93TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPP0_9PHAE1.920e-3259.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2GDG3_9STRA8.630e-850.91Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A813JH33_POLGL2.930e-752.00Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A482SEZ7_9ARCH2.970e-744.59Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A521W5M1_9PROT2.090e-643.86Tetratricopeptide repeat protein n=1 Tax=Betaprote... [more]
A0A6C0I759_9ZZZZ5.250e-639.68Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A7S2CTL8_9STRA8.090e-641.18Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A2S6TPJ7_9PROT1.700e-539.08UDP-glucose:protein N-beta-glucosyltransferase n=1... [more]
A0A1F4AZP4_9PROT1.710e-546.30Glyco_transf_41 domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11380coord: 1..106
e-value: 1.3E-13
score: 53.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68654contigH-elongata_contig68654:408..3187 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68654.14500.1mRNA_H-elongata_contig68654.14500.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68654 408..3187 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68654.14500.1 ID=prot_H-elongata_contig68654.14500.1|Name=mRNA_H-elongata_contig68654.14500.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=618bp
KKHLQVTVASWPMATDDWTEEHVLPQSDRRPVNLVQNRTASLLRLAKRRP
DVVVFVDVSLDAKTFLLSFGRVAPVQIALWGHAPTLGIPSIDYYVVPEAL
AGDAWRGADSPMSKEEGEEGKEEGTVCPSNSELTLPEDNCYDDDDYLLGD
WEAGGRYYDGGWRAFDGSPRGGRDGARGGETSASFSCPESGGEIFEDISL
DLERQEEFSTAGGVSLSVDCDRGLGDKAFGKKCFERDANGNVVMGGASSR
HSEKSEEKFEQFSQPEEATTMEEKEAVERGGFSFAPAVAAAATVQRIFRQ
SEGHGDTDLVVDDKDGNDYDIELEEIAANAEGAGDEDGDYWGLIPGEKTD
RAGGDELRNVPRNGATSIEAETGDRREGGNVSGGKLKGRDLEDQIKKHIT
GPGRVIISGKTIQLDTRGEKGGLGADDDDDDFDDDDDYTAVHPSLNRQGT
MPAGTPTGRTRAASPIATPAAPSSPGEAVSAADRRQGEAPARSPLSPGDN
SSPLEDFPHDCHHSEELRNCCCCRGDEWPLPWAGVEYGESVEEQVVLLEG
LGAFVTPPGWEGKLGTGELAQAADTAEVRRRRVAHLLPQASCLAVLPIPV
HHFHPEFDVAVGMLIDR*
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