prot_H-elongata_contig68563.14494.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68563.14494.1
Unique Nameprot_H-elongata_contig68563.14494.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
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BLAST of mRNA_H-elongata_contig68563.14494.1 vs. uniprot
Match: A0A6H5LAU8_9PHAE (CXXC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAU8_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 7.670e-7
Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 0 
Query:    9 GLDQELLMTIIEKIKHGREGDNLYRGLGKGWRKYCTAAKKAVRKKNEAPPRR-----ARRGRP 66
            GLDQE+L  II+K+K G +G NLY+GLG    +YCTAAK AVR+  +A PR      A RGRP
Sbjct:  199 GLDQEVLEEIIQKMKAGHKGQNLYKGLGHV--RYCTAAKLAVRR--DAVPRAPVVAPAARGRP 257
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68563.14494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LAU8_9PHAE7.670e-755.56CXXC-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68563contigH-elongata_contig68563:413..1166 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68563.14494.1mRNA_H-elongata_contig68563.14494.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68563 411..1166 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68563.14494.1 ID=prot_H-elongata_contig68563.14494.1|Name=mRNA_H-elongata_contig68563.14494.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
ALQARRADGLDQELLMTIIEKIKHGREGDNLYRGLGKGWRKYCTAAKKAV
RKKNEAPPRRARRGRPLGSVGKKRKQELQLQEEHPPEQHQEEQLERLEQR
QQ
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