prot_H-elongata_contig68504.14486.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig68504.14486.1
Unique Name	prot_H-elongata_contig68504.14486.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	103

Homology

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BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: D8LC01_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC01_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 6.390e-42
Identity = 70/101 (69.31%), Postives = 83/101 (82.18%), Query Frame = 0

Query:    3 LLGDMLRDSGGTDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNCFFV 103
            LLG  L+DS   DVPT+++LEGKVV  YFSASWCGPCRGFTPQL+KTY+AVR+AGKEFEVVLIGSD+K DDF+ YH++MPWLA+PF DR  + S    F V
Sbjct:    6 LLGPSLKDSAENDVPTAAALEGKVVAFYFSASWCGPCRGFTPQLVKTYNAVRAAGKEFEVVLIGSDRKEDDFLLYHKEMPWLALPFPDRERKSSLSTKFRV 106

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BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: A0A6T0B168_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6T0B168_CHRCT)

HSP 1 Score: 109 bits (272), Expect = 3.570e-26
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0

Query:    3 LLGDMLRDSGGTDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDR 91
            LLG  L  + G ++ T  +L+GK+VGLYFSA WC PCRGFTP L++TY  +++AGK FE+V + SDK +  F  Y  +MPWLAVPF DR
Sbjct:    5 LLGKSLTSASG-ELSTDDALKGKIVGLYFSAHWCPPCRGFTPALVETYKKIKTAGKAFEIVFVSSDKDQGAFDEYFGEMPWLAVPFSDR 92

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BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: A0A7S0SKT6_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SKT6_9CHLO)

HSP 1 Score: 105 bits (261), Expect = 9.940e-26
Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 0

Query:    3 LLGDMLRDSGGTDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNCFFV 103
            + GD LR   G +V T  +L GKVVG+YFSA WC PCR FTP+L + Y+ +++ GK FE+V   SDK  ++F  YH + PWLA+P+ +R  +      F V
Sbjct:   15 MFGDTLRGKDGVEVNTIDALAGKVVGVYFSAHWCPPCRKFTPKLAQIYEDLKAQGKNFEIVFASSDKTVEEFTEYHGEQPWLAIPYTNRESKNKLSKKFEV 115

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BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: C1KG41_LEIDO (Mitochondrial tryparedoxin n=2 Tax=Leishmania TaxID=38568 RepID=C1KG41_LEIDO)

HSP 1 Score: 101 bits (251), Expect = 3.090e-25
Identity = 51/90 (56.67%), Postives = 60/90 (66.67%), Query Frame = 0

Query:   14 TDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNCFFV 103
            TDV  SS L GK +  YFSASWC PCRGFTPQL++ Y    +  K FEV+LI  D++ DDF  Y+ KMPWLA+PFEDR G     N F V
Sbjct:   20 TDVALSS-LAGKTLFFYFSASWCPPCRGFTPQLVEFYKT-HAKSKNFEVMLISWDEEVDDFTEYYGKMPWLALPFEDRKGMEFLKNGFKV 107

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BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: A0A640KLN9_LEITA (Tryparedoxin, putative n=1 Tax=Leishmania tarentolae TaxID=5689 RepID=A0A640KLN9_LEITA)

HSP 1 Score: 100 bits (250), Expect = 4.040e-25
Identity = 51/100 (51.00%), Postives = 64/100 (64.00%), Query Frame = 0

Query:    4 LGDMLRDSGGTDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNCFFV 103
            LGD+ +     D    SSL GK+V LYFSASWC PCRGFTP L++ Y   +++ K FEVVL+  D++ DDF  Y+QKMPWL +PFE R    S    F V
Sbjct:    8 LGDVSKLQKQNDTVDLSSLSGKIVFLYFSASWCPPCRGFTPLLMEFYQKYQTS-KNFEVVLVSWDEEEDDFNGYYQKMPWLTIPFEKRSILESLTKTFKV 106

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BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: A0A067C8F6_SAPPC (Thioredoxin domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C8F6_SAPPC)

HSP 1 Score: 100 bits (250), Expect = 6.530e-25
Identity = 50/102 (49.02%), Postives = 63/102 (61.76%), Query Frame = 0

Query:    3 LLGDMLRDSGGTDVPTSSSLEG-KVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNCFFV 103
            L+G  LR SGG +V T+  L    VVGLYFSA WCGPCR FTP L   YD +  A  +F+VV + SDK  DDF  YH +MP+ A+P+ DR  Q +    F +
Sbjct:   11 LVGPRLRLSGGKEVATADHLASTSVVGLYFSAHWCGPCREFTPTLSTLYDDILDAHPDFDVVFVSSDKSEDDFCLYHDEMPFPALPWADRTRQAALREHFHI 112

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BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: A0A7S0MU66_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MU66_9CHLO)

HSP 1 Score: 105 bits (262), Expect = 9.940e-25
Identity = 48/90 (53.33%), Postives = 61/90 (67.78%), Query Frame = 0

Query:    3 LLGDMLRDSGGTDVPTSSSLE-GKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDR 91
            +LG  L  SGG  V   S  E G  + LYFSA WCGPCRGFTP+L+KTY+A+++AGK FE+V + SD+    F  Y   MPWLA+PF+ R
Sbjct:  144 VLGSELVSSGGNKVSVMSLKEAGTYIALYFSAHWCGPCRGFTPELVKTYNALKAAGKPFEIVFVSSDRDEASFAEYFGTMPWLALPFDKR 233

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BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: A0A6I9S557_ELAGV (probable nucleoredoxin 1-1 n=3 Tax=Cocoseae TaxID=169705 RepID=A0A6I9S557_ELAGV)

HSP 1 Score: 106 bits (264), Expect = 1.410e-24
Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 0

Query:    6 DMLRDSGGTDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFED 90
            D L  + G  V  ++ LEGK VGLYFSASWC PCRGFTP+LI+TY  + S GK+FEVV +  D+  D F  Y  KMPWLA+PF D
Sbjct:   59 DFLIHNNGDQVKIAN-LEGKTVGLYFSASWCPPCRGFTPKLIETYGELSSEGKDFEVVFVSGDRDEDSFNGYFSKMPWLAIPFSD 142

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BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: A0A8K0N1S5_COCNU (Putative nucleoredoxin 1-1 n=1 Tax=Cocos nucifera TaxID=13894 RepID=A0A8K0N1S5_COCNU)

HSP 1 Score: 105 bits (263), Expect = 1.510e-24
Identity = 50/97 (51.55%), Postives = 63/97 (64.95%), Query Frame = 0

Query:    7 MLRDSGGTDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNCFFV 103
            ++R+SG  D    ++LEGK +GLYFSASWC PCR FTPQLI+TY  + S GK+FEVV +  D+  D F  Y  KMPWLA+PF D   +      F V
Sbjct:   32 LVRNSG--DQVKIANLEGKYIGLYFSASWCPPCRRFTPQLIETYGELSSVGKDFEVVFVSRDRDEDSFNGYFSKMPWLAIPFSDSKARDRLHKLFNV 126

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BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: E9ADX3_LEIMA (Tryparedoxin n=8 Tax=Leishmania TaxID=38568 RepID=E9ADX3_LEIMA)

HSP 1 Score: 99.0 bits (245), Expect = 2.500e-24
Identity = 46/83 (55.42%), Postives = 56/83 (67.47%), Query Frame = 0

Query:   21 SLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNCFFV 103
            +L GK    YFSASWC PCRGFTPQL++ Y    +  K FEV+LI  D++ DDF  Y++KMPWLA+PFEDR G     N F V
Sbjct:   26 TLAGKTFFFYFSASWCPPCRGFTPQLVEFYKK-HAKSKNFEVMLISWDEEADDFAEYYKKMPWLALPFEDRKGMEFLKNGFKV 107

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot

BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LC01_ECTSI	6.390e-42	69.31	Thioredoxin domain-containing protein n=2 Tax=Ecto...	[more]
A0A6T0B168_CHRCT	3.570e-26	55.06	Hypothetical protein n=1 Tax=Chrysotila carterae T...	[more]
A0A7S0SKT6_9CHLO	9.940e-26	45.54	Hypothetical protein (Fragment) n=2 Tax=Mantoniell...	[more]
C1KG41_LEIDO	3.090e-25	56.67	Mitochondrial tryparedoxin n=2 Tax=Leishmania TaxI...	[more]
A0A640KLN9_LEITA	4.040e-25	51.00	Tryparedoxin, putative n=1 Tax=Leishmania tarentol...	[more]
A0A067C8F6_SAPPC	6.530e-25	49.02	Thioredoxin domain-containing protein n=2 Tax=Sapr...	[more]
A0A7S0MU66_9CHLO	9.940e-25	53.33	Hypothetical protein n=1 Tax=Pyramimonas obovata T...	[more]
A0A6I9S557_ELAGV	1.410e-24	57.65	probable nucleoredoxin 1-1 n=3 Tax=Cocoseae TaxID=...	[more]
A0A8K0N1S5_COCNU	1.510e-24	51.55	Putative nucleoredoxin 1-1 n=1 Tax=Cocos nucifera ...	[more]
E9ADX3_LEIMA	2.500e-24	55.42	Tryparedoxin n=8 Tax=Leishmania TaxID=38568 RepID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10		coord: 6..100 e-value: 5.3E-27 score: 96.4
None	No IPR available	PANTHER	PTHR13871:SF93		coord: 18..92
None	No IPR available	PANTHER	PTHR13871	THIOREDOXIN	coord: 18..92
IPR012336	Thioredoxin-like fold	PFAM	PF13905	Thioredoxin_8	coord: 24..92 e-value: 9.4E-21 score: 74.0
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 9..91

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig68504	contig	H-elongata_contig68504:1973..2569 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig68504.14486.1	mRNA_H-elongata_contig68504.14486.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig68504 1973..2569 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig68504.14486.1 ID=prot_H-elongata_contig68504.14486.1|Name=mRNA_H-elongata_contig68504.14486.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
MSLLGDMLRDSGGTDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTY
DAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNC
FFV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012336	Thioredoxin-like_fold
IPR036249	Thioredoxin-like_sf