prot_H-elongata_contig68481.14484.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68481.14484.1
Unique Nameprot_H-elongata_contig68481.14484.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length157
Homology
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: D7G152_ECTSI (Mcl1_mid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G152_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 2.540e-75
Identity = 119/157 (75.80%), Postives = 139/157 (88.54%), Query Frame = 0
Query:    1 ATNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPMGESQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 157
            ATNRQ VRLF+ASGLQGET+MLPGPVV+MVG GD+L V FHKGEP+G+ QNLGY+L DVGGKR LS GG+C SPG+ELTWLG SEE M++ MDS+GLVSAL +SFGWQWTP+LDT  VSK+K+ +FWPVGVV+GKLLA TLK GEEHP+AYPRPV+T
Sbjct:  462 ATNRQLVRLFSASGLQGETIMLPGPVVSMVGSGDVLMVAFHKGEPIGDGQNLGYKLLDVGGKRELSKGGLCLSPGSELTWLGSSEEGMVMAMDSAGLVSALTRSFGWQWTPLLDTLKVSKSKRYRFWPVGVVSGKLLAATLKDGEEHPAAYPRPVIT 618          
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: A0A6H5KWI2_9PHAE (Mcl1_mid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI2_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 1.300e-66
Identity = 102/137 (74.45%), Postives = 120/137 (87.59%), Query Frame = 0
Query:   21 MLPGPVVTMVGGGDLLAVVFHKGEPMGESQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 157
            MLPGPVV+MVG GD+L V FHKGEP+G+ QNLGY+L DVGGKR LS GG+C SPG+ELTWLG SEE M++ MDS+GLVSAL +SFGWQWTP+LDT  VSK+K+ +FWPVGVV+GKLLA TLK GEEHP+AYPRPV+T
Sbjct:    1 MLPGPVVSMVGSGDVLMVAFHKGEPIGDGQNLGYKLLDVGGKRELSKGGLCLSPGSELTWLGSSEEGMVMAMDSAGLVSALTRSFGWQWTPLLDTLKVSKSKRYRFWPVGVVSGKLLAATLKDGEEHPAAYPRPVIT 137          
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: A0A4D9D6X1_9STRA (Mcl1_mid domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6X1_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.000e-43
Identity = 81/163 (49.69%), Postives = 107/163 (65.64%), Query Frame = 0
Query:    1 ATNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPM------GESQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 157
            AT RQ+VRLFT SGLQ   + +PGPVVTMVG G+LLAV +H G P+        SQ+L YQL D+    V+S G VC SP + L W G     ML  MDS GL+S+L++ F W WTP+L++  + +NK D FWPVGV  G L+   L+GG+EHP   P+P+++
Sbjct:  546 ATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSPLRRNKMDSFWPVGVFNGSLMCSLLRGGDEHPPTNPKPLIS 708          
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: I2CRV7_NANGC (Wd repeat and hmg-box dna-binding protein 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRV7_NANGC)

HSP 1 Score: 137 bits (345), Expect = 4.990e-38
Identity = 70/136 (51.47%), Postives = 89/136 (65.44%), Query Frame = 0
Query:    1 ATNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPM------GESQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKKDQFWPVG 130
            AT RQ+VRLFT SGLQ   + +PGPVVTMVG G+LLAV +H G P+        SQ+L YQL D+    V+S G VC SP + L W G     ML  MDS GL+S+L++ F W WTP+L++  + +NK D FWPVG
Sbjct:   59 ATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLRRNKMDSFWPVG 194          
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: K0S0N3_THAOC (Mcl1_mid domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S0N3_THAOC)

HSP 1 Score: 115 bits (287), Expect = 4.420e-27
Identity = 71/165 (43.03%), Postives = 92/165 (55.76%), Query Frame = 0
Query:    2 TNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPMGES---QNLGYQLFDVGGKRVLSSGGVCT-SPGAELTWLGLSEERMLVTMDSSGLVSALM-----QSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 157
            T+R+F+RLFTA G+QG  + LPGP V +VG   L AV FH      ES   Q LGY ++D     V+ SG V + SPG+ L+W G +E+  L  MDS G+VS L       S    W PVLDT    +   D  WPV +   + + V L+GG+ HP A  RPV T
Sbjct:   59 TSRRFLRLFTAGGVQGPVLWLPGPPVAVVGREGLCAV-FHHRSSSAESDGTQLLGYAVYDGRDGSVVGSGNVSSLSPGSSLSWAGFNEKSALCVMDSEGMVSMLSLPAPSSSTAGAWMPVLDTAGHRRTSTDSHWPVELHGARFVCVLLRGGKTHPDAGRRPVTT 222          
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: A0A507D727_9FUNG (Mcl1_mid domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D727_9FUNG)

HSP 1 Score: 109 bits (272), Expect = 9.700e-25
Identity = 63/158 (39.87%), Postives = 90/158 (56.96%), Query Frame = 0
Query:    1 ATNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPMGESQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTP-SVSKNKKDQ-FWPVGVVTGKLLAVTLKGGEEHPSAYPRPVL 156
            AT+  ++R  + SG+Q     L GP+V+M G  D L VV+H G  + + Q L YQ++D+   R ++   +  SP AEL W+G SE  +  T DS G++  L  S    W P LDT  S S  K D+ +WP+GV    LL V LKG E HP  +P+P++
Sbjct:  553 ATDSNYLRFVSNSGIQTAVKCLDGPIVSMSGFRDFLFVVYHAGVLLNKDQRLAYQVYDLSLNRRIADKLLLLSPAAELEWIGFSEAGLPATYDSVGILRMLDISDDLDWIPFLDTRISKSLTKTDESYWPIGVTDTNLLCVILKGAERHPH-FPKPLI 709          
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: A0A8J9RDJ8_9CHLO (WD repeat and HMG-box DNA-binding protein 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RDJ8_9CHLO)

HSP 1 Score: 106 bits (265), Expect = 8.280e-24
Identity = 55/158 (34.81%), Postives = 89/158 (56.33%), Query Frame = 0
Query:    1 ATNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPMGE-SQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 157
            AT+RQF+R+F+A+GLQ     +PG +V +    +++A+ +H G P  + SQ+L Y ++ V  + ++ +G +C SP   L W G SEE ML + DS+G++     ++G  W PV +  S +  +    WPVGV    +  +    G   P   PRPVL+
Sbjct:  512 ATSRQFLRIFSAAGLQLSITSVPGRIVALAAHENMVALAWHSGMPAQDGSQSLAYSVYRVDVQGLVQTGMLCLSPKTSLAWFGFSEEGMLASYDSTGVMRLCCSAYGGSWVPVFEA-SQACAESQTCWPVGVSVADIYCIISAAGTSGPQVVPRPVLS 668          
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: I0Z5N9_COCSC (WD40 repeat-like protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z5N9_COCSC)

HSP 1 Score: 103 bits (257), Expect = 9.520e-23
Identity = 57/160 (35.62%), Postives = 89/160 (55.62%), Query Frame = 0
Query:    2 TNRQFVRLFTASGLQGE---TVMLPGPVVTMVGGGDLLAVVFHKGEPMGES-QNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 157
            T+RQ +R+F+A+G +        +PG VV M   G+L+AVV+H G P  +  Q L Y L+ V G+ ++ SG +C SP + L+W+G SEE ML T DS G++      +G  W PV +  S   ++    WP+G+ + ++  +        P   PRPVL+
Sbjct:  425 TSRQLLRVFSAAGKRTRHLSVTSIPGRVVAMAAHGNLVAVVWHAGMPAQDGHQALAYSLYRVDGQELVHSGMLCLSPQSSLSWMGFSEEGMLATHDSLGVMRLRSSVYGGCWVPVFEV-SKGCSENQTCWPIGISSSEIYCIISAASASGPQVVPRPVLS 583          
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: UPI00053C13D8 (WD repeat and HMG-box DNA-binding protein 1 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C13D8)

HSP 1 Score: 103 bits (257), Expect = 9.930e-23
Identity = 61/159 (38.36%), Postives = 87/159 (54.72%), Query Frame = 0
Query:    2 TNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPM-GESQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKK--DQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 157
            T+   +R+F+  GLQ   + + GPVV+  G  D LAV+ H  + +   SQ + +++F++      S G V  +PG+ LTWLG SEE +L T DS G++      FG  W PV    SVSK KK  + +WPVG+ +  L  V  K     P   P+PVLT
Sbjct:  551 TSLNLLRIFSEGGLQKHVLSIDGPVVSAAGFKDELAVITHVSDCLPSNSQVMEFKVFNITTMSQSSKGRVPLTPGSSLTWLGFSEEGLLSTCDSEGVLRVFTNQFGGTWIPVF---SVSKEKKQHENYWPVGLSSSNLYCVVCKHPSIFPQVTPKPVLT 706          
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Match: A0A2K1ID13_PHYPA (Mcl1_mid domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1ID13_PHYPA)

HSP 1 Score: 102 bits (255), Expect = 1.780e-22
Identity = 54/157 (34.39%), Postives = 86/157 (54.78%), Query Frame = 0
Query:    2 TNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPM-GESQNLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSALMQSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSAYPRPVLT 157
            T++ F+R+++ +GLQ     L GPVV++VG GD LAVV H   P+    Q L + L +V  ++ L +G +  SPG+ LTW+G SE   L + DS G++      F   W PV    +    + + +W VG+ T ++  +  K  E  P   P+PV++
Sbjct:  264 TSQYFLRVYSEAGLQRFVTSLGGPVVSLVGNGDRLAVVTHASSPLPSRDQMLEFMLLNVRTQKRLLTGRLPLSPGSTLTWIGFSEAGSLSSYDSQGVLRVYSSEFNGCWIPVFSAAAERTKENETYWVVGLNTTQVYCIVCKAPESQPQVMPKPVMS 420          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68481.14484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G152_ECTSI2.540e-7575.80Mcl1_mid domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KWI2_9PHAE1.300e-6674.45Mcl1_mid domain-containing protein n=1 Tax=Ectocar... [more]
A0A4D9D6X1_9STRA1.000e-4349.69Mcl1_mid domain-containing protein n=3 Tax=Monodop... [more]
I2CRV7_NANGC4.990e-3851.47Wd repeat and hmg-box dna-binding protein 1 (Fragm... [more]
K0S0N3_THAOC4.420e-2743.03Mcl1_mid domain-containing protein (Fragment) n=1 ... [more]
A0A507D727_9FUNG9.700e-2539.87Mcl1_mid domain-containing protein n=1 Tax=Synchyt... [more]
A0A8J9RDJ8_9CHLO8.280e-2434.81WD repeat and HMG-box DNA-binding protein 1 n=1 Ta... [more]
I0Z5N9_COCSC9.520e-2335.63WD40 repeat-like protein (Fragment) n=1 Tax=Coccom... [more]
UPI00053C13D89.930e-2338.36WD repeat and HMG-box DNA-binding protein 1 n=1 Ta... [more]
A0A2K1ID13_PHYPA1.780e-2234.39Mcl1_mid domain-containing protein n=2 Tax=Physcom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022100Minichromosome loss protein Mcl1, middle regionPFAMPF12341Mcl1_midcoord: 1..157
e-value: 1.4E-42
score: 146.0
NoneNo IPR availablePANTHERPTHR19932WD REPEAT AND HMG-BOX DNA BINDING PROTEINcoord: 1..157
NoneNo IPR availablePANTHERPTHR19932:SF10WD REPEAT AND HMG-BOX DNA-BINDING PROTEIN 1coord: 1..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68481contigH-elongata_contig68481:1310..3068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68481.14484.1mRNA_H-elongata_contig68481.14484.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68481 1310..3068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68481.14484.1 ID=prot_H-elongata_contig68481.14484.1|Name=mRNA_H-elongata_contig68481.14484.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
ATNRQFVRLFTASGLQGETVMLPGPVVTMVGGGDLLAVVFHKGEPMGESQ
NLGYQLFDVGGKRVLSSGGVCTSPGAELTWLGLSEERMLVTMDSSGLVSA
LMQSFGWQWTPVLDTPSVSKNKKDQFWPVGVVTGKLLAVTLKGGEEHPSA
YPRPVLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022100Mcl1_mid