prot_H-elongata_contig68468.14481.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68468.14481.1
Unique Nameprot_H-elongata_contig68468.14481.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length147
Homology
BLAST of mRNA_H-elongata_contig68468.14481.1 vs. uniprot
Match: D8LN05_ECTSI (PHD-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN05_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 8.710e-65
Identity = 123/147 (83.67%), Postives = 127/147 (86.39%), Query Frame = 0
Query:    1 QLVNELGGVSKVAEMTGRKGRMVKKEDGESHALKHDFEVDSSFDLSNVYEKECFMSGQKLVAIISEAASAGISLQADRRVKNQQPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASTVSRRLESLGALTQ 147
            QLVNELGG   VAEMTGRKGRMVKK DGE    K +     S  + NV+EKECFMSGQKLVAIISEAASAGISLQADRR KNQ+PRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFAS VS RLESLGALTQ
Sbjct:  121 QLVNELGGAGVVAEMTGRKGRMVKKPDGEVVYEKRNANG-ISMTMQNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASAVSSRLESLGALTQ 266          
BLAST of mRNA_H-elongata_contig68468.14481.1 vs. uniprot
Match: A0A7S3JZA5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZA5_9STRA)

HSP 1 Score: 186 bits (472), Expect = 8.300e-52
Identity = 101/149 (67.79%), Postives = 121/149 (81.21%), Query Frame = 0
Query:    2 LVNELGGVSKVAEMTGRKGRMVKKEDGESHALKHDFEVDS---SFDLSNVYEKECFMSGQKLVAIISEAASAGISLQADRRVKNQQPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASTVSRRLESLGALTQ 147
            L++ LGG   VAEMTGRK RMV+  D ++  ++ +   +    S ++ N++EK CF +G+K VAIISEAASAGISLQADRRV NQ+ RVHIT+ELPWSADKA+QQLGRSHRSNQSSAP YK L+SSVGGERRFAS V+RRLESLGALTQ
Sbjct:  819 LIDALGGSENVAEMTGRKNRMVR--DPKTGKVRQEVRNEKNGVSLEMQNMHEKRCFQNGEKCVAIISEAASAGISLQADRRVPNQKRRVHITLELPWSADKAIQQLGRSHRSNQSSAPEYKFLISSVGGERRFASAVARRLESLGALTQ 965          
BLAST of mRNA_H-elongata_contig68468.14481.1 vs. uniprot
Match: A0A2G3BC98_CAPCH (Protein strawberry notch-like protein 1 n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3BC98_CAPCH)

HSP 1 Score: 175 bits (444), Expect = 3.930e-51
Identity = 90/143 (62.94%), Postives = 114/143 (79.72%), Query Frame = 0
Query:    5 ELGGVSKVAEMTGRKGRMVKKEDGESHALKHDFEVDSSFDLSNVYEKECFMSGQKLVAIISEAASAGISLQADRRVKNQQPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASTVSRRLESLGALTQ 147
            ELGG   VAE+TGRKG +V+   G+    +     D S ++ N++EK+ FM G+KLVAIISEA SAG+SLQADRR  NQ+ RVH+T+ELPWSAD+A+QQ GR+HRSNQ+SAP YKLL +++GGERRFAS V++RLESLGALTQ
Sbjct:   45 ELGGPENVAEITGRKGMLVRAASGKGVTYQARNTKDVSMEMVNIHEKQLFMEGKKLVAIISEAGSAGVSLQADRRALNQRRRVHVTLELPWSADRAIQQFGRTHRSNQASAPEYKLLFTNLGGERRFASVVAKRLESLGALTQ 187          
BLAST of mRNA_H-elongata_contig68468.14481.1 vs. uniprot
Match: UPI00077B237B (LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077B237B)

HSP 1 Score: 171 bits (434), Expect = 1.740e-50
Identity = 92/146 (63.01%), Postives = 115/146 (78.77%), Query Frame = 0
Query:    1 QLVNELGGVSKVAEMTGRKGRMVKKEDGESHALKHDFEVDSSFDLSNVYEKECFMSGQKLVAIISEAASAGISLQADRRVKNQQPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASTVSRRLESLGALT 146
            +L+++LGG   VAEMTGRK R+V  EDG + + +   + D   +L N+ EK+ FM G+K VA+ISEAAS+G+SLQADRR KNQ+ RVHIT+ELPWSADKA+QQ GRSHRSNQ SAP Y  L+S + GERRFAS V++RLESLGALT
Sbjct:   23 KLIHDLGGPDNVAEMTGRKNRVVSNEDG-TISYESRSKQDVPLELLNIAEKKRFMDGEKNVAVISEAASSGVSLQADRRAKNQRRRVHITLELPWSADKAIQQFGRSHRSNQVSAPEYLFLISELAGERRFASIVAKRLESLGALT 167          
BLAST of mRNA_H-elongata_contig68468.14481.1 vs. uniprot
Match: A0A8J2S7U1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S7U1_9STRA)

HSP 1 Score: 181 bits (460), Expect = 3.170e-50
Identity = 101/148 (68.24%), Postives = 120/148 (81.08%), Query Frame = 0
Query:    2 LVNELGGVSKVAEMTGRKGRMVKKEDGESHALKHDFEVDS--SFDLSNVYEKECFMSGQKLVAIISEAASAGISLQADRRVKNQQPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASTVSRRLESLGALTQ 147
            L+ ELGG   VAEMTGRKGRMV+  D  S  + ++    +  S ++ N++EK+ F  G+K VAIISEAASAGISLQADRRV NQ+ RVHIT+ELPWSADKA+QQLGR+HRSNQSSAP YK L+SSVGGE+RFAS V+RRLESLGALTQ
Sbjct:  722 LIAELGGSDCVAEMTGRKGRMVR--DATSGKVVYEARNSNGVSLEMQNMHEKQAFNGGEKHVAIISEAASAGISLQADRRVANQRRRVHITLELPWSADKAIQQLGRTHRSNQSSAPEYKFLISSVGGEKRFASAVARRLESLGALTQ 867          
BLAST of mRNA_H-elongata_contig68468.14481.1 vs. uniprot
Match: A0A7S4A0M8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0M8_9STRA)

HSP 1 Score: 181 bits (460), Expect = 3.400e-50
Identity = 101/148 (68.24%), Postives = 120/148 (81.08%), Query Frame = 0
Query:    2 LVNELGGVSKVAEMTGRKGRMVKKEDGESHALKHDFEVDS--SFDLSNVYEKECFMSGQKLVAIISEAASAGISLQADRRVKNQQPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASTVSRRLESLGALTQ 147
            L+ ELGG   VAEMTGRKGRMV+  D  S  + ++    +  S ++ N++EK+ F  G+K VAIISEAASAGISLQADRRV NQ+ RVHIT+ELPWSADKA+QQLGR+HRSNQSSAP YK L+SSVGGE+RFAS V+RRLESLGALTQ
Sbjct:  722 LIAELGGSDCVAEMTGRKGRMVR--DATSGKVVYEARNSNGVSLEMQNMHEKQAFNGGEKHVAIISEAASAGISLQADRRVANQRRRVHITLELPWSADKAIQQLGRTHRSNQSSAPEYKFLISSVGGEKRFASAVARRLESLGALTQ 867          
BLAST of mRNA_H-elongata_contig68468.14481.1 vs. uniprot
Match: A0A0K0ELL9_STRER (Uncharacterized protein n=1 Tax=Strongyloides stercoralis TaxID=6248 RepID=A0A0K0ELL9_STRER)

HSP 1 Score: 181 bits (460), Expect = 3.450e-50
Identity = 96/146 (65.75%), Postives = 117/146 (80.14%), Query Frame = 0
Query:    1 QLVNELGGVSKVAEMTGRKGRMVKKEDGESHALKHDFEVDSSFDLSNVYEKECFMSGQKLVAIISEAASAGISLQADRRVKNQQPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASTVSRRLESLGALT 146
            QL++ELGG   VAEMTGRKGR+V KE+GE    +     D++ +L NV EK  FM G+KL+AIISEAAS+GISLQADRR +N++ RVHITMELPWSADKA+QQ GR+HRSNQ SAP Y  L+S + GE+RFAS V++RLESLGALT
Sbjct: 1212 QLIDELGGPEFVAEMTGRKGRVVTKENGEVEYQQRHIGTDATVELMNVEEKHKFMKGEKLIAIISEAASSGISLQADRRAENKRRRVHITMELPWSADKAIQQFGRTHRSNQVSAPEYLFLISELAGEKRFASIVAKRLESLGALT 1357          
BLAST of mRNA_H-elongata_contig68468.14481.1 vs. uniprot
Match: A0A1B0D8D3_PHLPP (Helicase_C_4 domain-containing protein n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0D8D3_PHLPP)

HSP 1 Score: 172 bits (437), Expect = 4.070e-50
Identity = 94/146 (64.38%), Postives = 116/146 (79.45%), Query Frame = 0
Query:    1 QLVNELGGVSKVAEMTGRKGRMVKKEDGESHALKHDFEVDSSFDLSNVYEKECFMSGQKLVAIISEAASAGISLQADRRVKNQQPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASTVSRRLESLGALT 146
            QL++ELGG   VAEMTGRKGR+V+ EDG+        E D   +  N+ EK  FM+G+K VAIISEAAS+GISLQ+DRRV+NQ+ RVHIT+ELPWSAD+A+QQ GR+HRSNQ +AP Y  L+S + GERRFASTV++RLESLGALT
Sbjct:   41 QLIDELGGPENVAEMTGRKGRVVQTEDGQIQYESRS-EQDVPLETLNLTEKGRFMNGEKDVAIISEAASSGISLQSDRRVRNQRRRVHITLELPWSADRAIQQFGRTHRSNQVNAPEYIFLISDLAGERRFASTVAKRLESLGALT 185          
BLAST of mRNA_H-elongata_contig68468.14481.1 vs. uniprot
Match: A0A0K0FW75_STRVS (Protein strawberry notch homolog 2 (inferred by orthology to a human protein) n=2 Tax=Strongyloides TaxID=6247 RepID=A0A0K0FW75_STRVS)

HSP 1 Score: 181 bits (459), Expect = 4.660e-50
Identity = 96/146 (65.75%), Postives = 117/146 (80.14%), Query Frame = 0
Query:    1 QLVNELGGVSKVAEMTGRKGRMVKKEDGESHALKHDFEVDSSFDLSNVYEKECFMSGQKLVAIISEAASAGISLQADRRVKNQQPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASTVSRRLESLGALT 146
            QL++ELGG   VAEMTGRKGR+V KE+GE    +     D++ +L NV EK  FM G+KL+AIISEAAS+GISLQADRR +N++ RVHITMELPWSADKA+QQ GR+HRSNQ SAP Y  L+S + GE+RFAS V++RLESLGALT
Sbjct:  917 QLIDELGGPEFVAEMTGRKGRVVTKENGEVEYQQRHVGTDATVELMNVEEKHKFMKGEKLIAIISEAASSGISLQADRRAENKRRRVHITMELPWSADKAIQQFGRTHRSNQVSAPEYLFLISELAGEKRFASIVAKRLESLGALT 1062          
BLAST of mRNA_H-elongata_contig68468.14481.1 vs. uniprot
Match: A0A0P5BEC0_9CRUS (Protein strawberry notch n=6 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5BEC0_9CRUS)

HSP 1 Score: 181 bits (458), Expect = 6.330e-50
Identity = 98/146 (67.12%), Postives = 119/146 (81.51%), Query Frame = 0
Query:    1 QLVNELGGVSKVAEMTGRKGRMVKKEDGESHALKHDFEVDSSFDLSNVYEKECFMSGQKLVAIISEAASAGISLQADRRVKNQQPRVHITMELPWSADKAVQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASTVSRRLESLGALT 146
            QL++ELGG   VAEMTGRKGR+V+ +DG+        EVD   ++ N+ EKE FM+G+K VAIISEAAS+GISLQADRRVKNQ+ RVHIT+ELPWSAD+AVQQ GR+HRSNQ SAP Y  L+S++ GERRFAS V++RLESLGALT
Sbjct:  884 QLIDELGGPENVAEMTGRKGRVVQNDDGQVQYESRS-EVDVPLEILNIREKERFMAGEKDVAIISEAASSGISLQADRRVKNQRRRVHITLELPWSADRAVQQFGRTHRSNQVSAPEYIFLISNLAGERRFASIVAKRLESLGALT 1028          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68468.14481.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN05_ECTSI8.710e-6583.67PHD-type domain-containing protein (Fragment) n=1 ... [more]
A0A7S3JZA5_9STRA8.300e-5267.79Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A2G3BC98_CAPCH3.930e-5162.94Protein strawberry notch-like protein 1 n=1 Tax=Ca... [more]
UPI00077B237B1.740e-5063.01LOW QUALITY PROTEIN: protein strawberry notch homo... [more]
A0A8J2S7U1_9STRA3.170e-5068.24Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4A0M8_9STRA3.400e-5068.24Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0K0ELL9_STRER3.450e-5065.75Uncharacterized protein n=1 Tax=Strongyloides ster... [more]
A0A1B0D8D3_PHLPP4.070e-5064.38Helicase_C_4 domain-containing protein n=1 Tax=Phl... [more]
A0A0K0FW75_STRVS4.660e-5065.75Protein strawberry notch homolog 2 (inferred by or... [more]
A0A0P5BEC0_9CRUS6.330e-5067.12Protein strawberry notch n=6 Tax=Daphnia magna Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026937Strawberry notch, helicase C domainPFAMPF13871Helicase_C_4coord: 1..147
e-value: 1.2E-69
score: 235.0
IPR026741Protein strawberry notchPANTHERPTHR12706STRAWBERRY NOTCH-RELATEDcoord: 1..147
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 54..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68468contigH-elongata_contig68468:668..2194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68468.14481.1mRNA_H-elongata_contig68468.14481.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68468 668..2194 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68468.14481.1 ID=prot_H-elongata_contig68468.14481.1|Name=mRNA_H-elongata_contig68468.14481.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp
QLVNELGGVSKVAEMTGRKGRMVKKEDGESHALKHDFEVDSSFDLSNVYE
KECFMSGQKLVAIISEAASAGISLQADRRVKNQQPRVHITMELPWSADKA
VQQLGRSHRSNQSSAPSYKLLLSSVGGERRFASTVSRRLESLGALTQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026937SBNO_Helicase_C_dom
IPR026741SNO
IPR027417P-loop_NTPase