prot_H-elongata_contig6839.14467.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6839.14467.1
Unique Nameprot_H-elongata_contig6839.14467.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length198
Homology
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: D8LJF7_ECTSI (Photosystem II oxygen evolution complex protein PsbP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF7_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 4.170e-81
Identity = 128/197 (64.97%), Postives = 155/197 (78.68%), Query Frame = 0
Query:    1 MSAEEPANRAGFLTSYAALAAFASTAALPLAAIADEEVRSRLVVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPRL 197
            MSAE P++RA FLT+ AA+AA  S   LPL A+ADE       V LVTTKLGG+LEPFADVSKGYRLAKP+GWNR+DG +GEY VKMVDLVD +  ILL NSPVKSDT L+ +G    +G K+SK RD+E+V  RDR+TEGIRLYD+EFK   R EL+TL+VNK+KLW+L + CPEK+W++Q E  KT+VDSFLPRL
Sbjct:   38 MSAEGPSDRAQFLTTSAAVAA--SAVMLPLVAVADEGETGSKQVKLVTTKLGGKLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGSATQVGEKLSKGRDMELVSARDRVTEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAWEKQEEPFKTIVDSFLPRL 232          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A6V2XVF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XVF7_HETAK)

HSP 1 Score: 149 bits (376), Expect = 1.150e-41
Identity = 75/182 (41.21%), Postives = 119/182 (65.38%), Query Frame = 0
Query:   17 AALAAFASTAALPLAAIADEEVRSRLVVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCP-EKSWKQQGEVLKTVVDSFLPRL 197
            AA  A  +TA +P+ A A+ E   R      T+++GG ++P+ DV+KG++L +P GW+ F    GEY VK VDLV++++TI +  +PVKS T++  +G++ ++G K++ +R  E++   D+ITE IR Y +EFK    +E+  L++NK +LWSL+   P EKSW ++ E  + V  SFLPRL
Sbjct:   51 AAATAAVATATVPIVAFAEPEQVER-----ATSRMGGTMDPYNDVNKGFKLMRPGGWDAFSNAPGEYDVKFVDLVNKAETITVSTTPVKSSTSIDALGEVGAVGAKLAASRGAELLSANDKITENIRAYTFEFKKGSSYEIYQLSINKGRLWSLSCVAPSEKSWAKRKEAYRVVAGSFLPRL 227          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A7R9Y8Q4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q4_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.290e-34
Identity = 61/153 (39.87%), Postives = 99/153 (64.71%), Query Frame = 0
Query:   44 VPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPR 196
            VPL  ++LGG LEP++D+ +G+RL  P  WN+F+   G Y V+ VDLV+  + +LL  SPVKSD +L  +G  + +G K++ +R+ + V    R TEG+  YD+EF+SK  HE  TLA+ +++LW+L++    K+W ++      +  SF+P+
Sbjct:   71 VPLSKSRLGGVLEPYSDIQRGFRLMAPYSWNKFENGEG-YDVRWVDLVNVKENVLLRTSPVKSDASLEAIGTPEKIGEKLAASREAQCVSATARQTEGLLFYDFEFESKAAHEYATLAIARNRLWNLSVVTEPKNWSKRKASFDGIRKSFIPK 222          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A7S2FXS9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FXS9_9STRA)

HSP 1 Score: 125 bits (313), Expect = 6.830e-33
Identity = 67/151 (44.37%), Postives = 96/151 (63.58%), Query Frame = 0
Query:   49 TKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNS-PVKSDTT-LTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPRL 197
            TK+GG LEP+ DV KG+R+ KP GWN+FD   G Y +K  DLV  ++ +LL  + PVKS TT + M+GD+  +G K+ K +  E++  +    EGI  Y +EFK++D H+L  L VNK KLWS+  S P+K W +  E+    + SF+P L
Sbjct:   16 TKMGGLLEPYNDVGKGWRINKPSGWNQFDTLPGVYEMKWEDLVATNREVLLVTTTPVKSTTTSVDMLGDVTEVGRKLGKGKK-ELLSAKAVEKEGILFYMWEFKTEDGHQLLQLCVNKGKLWSVDASAPDKRWSKVSELYTNSLLSFMPTL 165          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A7S4BPW2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BPW2_CHRCT)

HSP 1 Score: 124 bits (311), Expect = 5.760e-32
Identity = 54/148 (36.49%), Postives = 98/148 (66.22%), Query Frame = 0
Query:   49 TKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPR 196
            +++GG LEPF DV KGY+L KP+ WN+FD + G Y VK  D+++  + + + +SPV + T+++ +GD+ ++G K +K+R+ E++  ++R  +G  +Y +E K +  HE   LAVN+ KL+ ++     K W ++ E+ K ++ SF+P+
Sbjct:   74 SRMGGALEPFIDVQKGYKLYKPVAWNQFDADPGVYDVKFQDVIEPFEIVQVSSSPVTTATSVSALGDVSAVGVKFAKSRNAELISAKERDADGSLVYTFELKGEMYHEYLALAVNRGKLFRVSTVTSNKRWPKREELFKNIILSFVPK 221          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A7S4JXM0_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JXM0_9EUKA)

HSP 1 Score: 123 bits (309), Expect = 1.010e-31
Identity = 65/175 (37.14%), Postives = 108/175 (61.71%), Query Frame = 0
Query:   23 ASTAALPLA--AIADEEVRSRLVVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLP 195
            A+ AAL LA  A A+EE  SRL         GG LEPF D+ KGY+L KP GW ++  + G Y VK  D+++  +++++ +SPV + T+++ +GD+ ++G K +K+R+ E+VK  +R  +G  +Y  E K    HEL TL++N+ KL+ +  +   K W ++ E+   ++ SF+P
Sbjct:   50 AAVAALGLASSASAEEETFSRL---------GGLLEPFVDIQKGYKLYKPSGWTQYSIDPGVYDVKFADIIEPFESVIVSSSPVATATSISALGDLPTVGAKFAKSRNAELVKATERTADGNLVYTLELKGDVYHELLTLSINRGKLFRVTATATNKRWSKRSELYSNIMLSFVP 215          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A7S0NW19_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NW19_9EUKA)

HSP 1 Score: 121 bits (303), Expect = 8.580e-31
Identity = 71/191 (37.17%), Postives = 109/191 (57.07%), Query Frame = 0
Query:   10 AGFLTSYAALAAFASTAALPL----AAIADEEVRSRLVVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPR 196
            AG ++    LAA A+T  L +    AA ADE             K+GG LEP+ DV KGY+L +P  WN+FD + G Y VK  D+++  +T+ + +SPV S T+++ +GDI S+  K +K+R+ E+V   +R  +G  LY  E +    HE   L +N+ KL+ L+     K W ++ E+ K VV SF+P+
Sbjct:   39 AGGISRRQQLAAAAATGVLSVFGTHAASADETFN----------KMGGALEPYIDVQKGYKLYRPTAWNQFDTDPGVYDVKFQDVINSFETVQVSSSPVSSATSISALGDIASVAAKFAKSRNAELVSSSERDADGSLLYSMELQGDMYHEYLALTINRGKLFRLSTVTSNKRWSKRQELYKNVVLSFVPK 219          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A7S0W0N6_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W0N6_9CRYP)

HSP 1 Score: 117 bits (293), Expect = 1.720e-28
Identity = 55/153 (35.95%), Postives = 95/153 (62.09%), Query Frame = 0
Query:   49 TKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDR----HELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPRL 197
            +++GG LEPF D++KG++L KP GWN+FD   GEY +K  DLV++S+ +++    V++  ++  +GD+++LG K++  +  E+V    R  +GI  Y + FK  +      E+  L VNK +LWS+  +  EK W ++ +    V+ SF+P+L
Sbjct:  152 SRMGGLLEPFKDINKGFQLLKPRGWNQFDAAPGEYDIKWEDLVEKSEMVMVGTKEVQTAKSVDALGDVEALGKKLAAKKKAELVSAEKREVDGILFYKFIFKQGNEKVGAREVYQLCVNKGRLWSVTATTSEKRWAKREKFYDNVMMSFVPKL 304          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A1X6NNU3_PORUM (PsbP domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNU3_PORUM)

HSP 1 Score: 112 bits (279), Expect = 4.210e-27
Identity = 54/147 (36.73%), Postives = 89/147 (60.54%), Query Frame = 0
Query:   51 LGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPRL 197
            LG  +E + D++KG+ + +P GWN+F+  AG+Y +K  DL+   + I +  +PV    T+  +G   ++G K++K+R  E+V    +  EG+  Y  E KS   H+L TL VNKSKL+S+ +S  E  W ++ ++L+ V +SF P L
Sbjct:   86 LGSSVEVYKDLNKGFTILRPQGWNQFEATAGQYDIKWQDLIQPLEIITVLTTPVGKGKTVADIGTPDAVGTKLAKSRRAELVSAVSKEEEGLTYYTVELKSASVHQLTTLVVNKSKLYSVNVSSAEGKWSKREKLLRGVAESFKPSL 232          
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Match: A0A7S2FXI9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FXI9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 4.990e-27
Identity = 57/150 (38.00%), Postives = 92/150 (61.33%), Query Frame = 0
Query:   50 KLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRS-KTILLYNSPVKSDT-TLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFKSKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPRL 197
            + GG LEP++D+++G+R+ KP  WN+FD   G Y +K  DLV  + + I+L  SPVKS T ++  +G ++ +G K++K RD +++  +    EGI  Y ++ +    H+L TL V K KLW +  S PE  W + G + + V  SF+P+L
Sbjct:   34 RAGGLLEPYSDITRGWRILKPSTWNQFDQIPGTYDMKWEDLVSLNYQQIILTTSPVKSTTVSVDALGPVEEVGLKLAKTRDAKLLSAKAFTKEGILFYLFDLQGPAVHQLLTLCVFKGKLWKVDASAPETRWAKTGPLYEKVAASFMPKL 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6839.14467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LJF7_ECTSI4.170e-8164.97Photosystem II oxygen evolution complex protein Ps... [more]
A0A6V2XVF7_HETAK1.150e-4141.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9Y8Q4_9STRA3.290e-3439.87Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2FXS9_9STRA6.830e-3344.37Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4BPW2_CHRCT5.760e-3236.49Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4JXM0_9EUKA1.010e-3137.14Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S0NW19_9EUKA8.580e-3137.17Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S0W0N6_9CRYP1.720e-2835.95Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A1X6NNU3_PORUM4.210e-2736.73PsbP domain-containing protein n=1 Tax=Porphyra um... [more]
A0A7S2FXI9_9STRA4.990e-2738.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 55..193
e-value: 2.5E-18
score: 66.7
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10coord: 46..194
e-value: 4.3E-27
score: 96.7
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 57..193
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..197
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..22
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..34
score: 7.869

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6839contigH-elongata_contig6839:6478..7935 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6839.14467.1mRNA_H-elongata_contig6839.14467.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6839 6463..8464 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6839.14467.1 ID=prot_H-elongata_contig6839.14467.1|Name=mRNA_H-elongata_contig6839.14467.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
MSAEEPANRAGFLTSYAALAAFASTAALPLAAIADEEVRSRLVVPLVTTK
LGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYAVKMVDLVDRSKTILLY
NSPVKSDTTLTMVGDIQSLGNKISKNRDLEMVKMRDRITEGIRLYDYEFK
SKDRHELRTLAVNKSKLWSLAISCPEKSWKQQGEVLKTVVDSFLPRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP_C
IPR016123Mog1/PsbP_a/b/a-sand
IPR006311TAT_signal