prot_H-elongata_contig68318.14459.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68318.14459.1
Unique Nameprot_H-elongata_contig68318.14459.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length42
Homology
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BLAST of mRNA_H-elongata_contig68318.14459.1 vs. uniprot
Match: D8LD61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD61_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 5.310e-9
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:    1 VNALEEQRKFLPLAELEPQLWYAPFPASAYHGMIDAQEEV 40
            V AL  Q+++LPLAELEPQLWY  FPASAY  M+ AQEE+
Sbjct: 1018 VCALALQKRYLPLAELEPQLWYEAFPASAYQDMVAAQEEL 1057
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68318.14459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD61_ECTSI5.310e-967.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68318contigH-elongata_contig68318:2709..2834 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68318.14459.1mRNA_H-elongata_contig68318.14459.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68318 2709..2834 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68318.14459.1 ID=prot_H-elongata_contig68318.14459.1|Name=mRNA_H-elongata_contig68318.14459.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=42bp
VNALEEQRKFLPLAELEPQLWYAPFPASAYHGMIDAQEEVSY
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