prot_H-elongata_contig68299.14456.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68299.14456.1
Unique Nameprot_H-elongata_contig68299.14456.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length126
Homology
BLAST of mRNA_H-elongata_contig68299.14456.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 134 bits (337), Expect = 5.600e-34
Identity = 63/125 (50.40%), Postives = 86/125 (68.80%), Query Frame = 0
Query:    1 MENLFEEATVKAVIKKANPQSAAGPSGLRYNHLKAALCNELVEDLAAFATLVVSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRGVTGTVFCRRYGRKLADYFQPWGQYGVAVSGGVEVMA 125
            +E  F   TV A I++ NPQ + GPSGLR++ L+++L  EL E +A   +++     LP  FW LHTSANLSA+G K RP+A GD+ R + G V CR+YG  LA++F+P GQYGVAV GG E++A
Sbjct: 1154 VEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLA 1278          
BLAST of mRNA_H-elongata_contig68299.14456.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.990e-26
Identity = 60/123 (48.78%), Postives = 79/123 (64.23%), Query Frame = 0
Query:    5 FEEATVKAVIKKANPQSAAGPSGLRYNHLKAA-LCNELVEDLAAFATLVVS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRGVTGTVFCRRYGRKLADYFQPWGQYGVAVSGGVEVMA 125
            FE   +K  +KKANPQSA GP GLR+++L+A  + +   E LA F+  V      LP  FW LHTSANLSALG+K RP+A G VLR +    FCR+Y   +A+ F+   Q+G  V GGVE++A
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVA 242          
BLAST of mRNA_H-elongata_contig68299.14456.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 3.570e-26
Identity = 60/123 (48.78%), Postives = 79/123 (64.23%), Query Frame = 0
Query:    5 FEEATVKAVIKKANPQSAAGPSGLRYNHLKAA-LCNELVEDLAAFATLVVS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRGVTGTVFCRRYGRKLADYFQPWGQYGVAVSGGVEVMA 125
            FE   +K  +KKANPQSA GP GLR+++L+A  + +   E LA F+  V      LP  FW LHTSANLSALG+K RP+A G VLR +    FCR+Y   +A+ F+   Q+G  V GGVE++A
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVA 242          
BLAST of mRNA_H-elongata_contig68299.14456.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 8.890e-26
Identity = 60/123 (48.78%), Postives = 79/123 (64.23%), Query Frame = 0
Query:    5 FEEATVKAVIKKANPQSAAGPSGLRYNHLKAA-LCNELVEDLAAFATLVVS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRGVTGTVFCRRYGRKLADYFQPWGQYGVAVSGGVEVMA 125
            FE   +K  +KKANPQSA GP GLR+++L+A  + +   E LA F+  V      LP  FW LHTSANLSALG+K RP+A G VLR +    FCR+Y   +A+ F+   Q+G  V GGVE++A
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVA 242          
BLAST of mRNA_H-elongata_contig68299.14456.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 3.820e-25
Identity = 59/123 (47.97%), Postives = 78/123 (63.41%), Query Frame = 0
Query:    5 FEEATVKAVIKKANPQSAAGPSGLRYNHLKAA-LCNELVEDLAAFATLVVS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRGVTGTVFCRRYGRKLADYFQPWGQYGVAVSGGVEVMA 125
            FE   +K  +KKANPQSA GP GLR+++L+A  + +   E LA F+  V      LP  FW LHTSANLSALG+K RP+A G VLR +    FC +Y   +A+ F+   Q+G  V GGVE++A
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVA 242          
BLAST of mRNA_H-elongata_contig68299.14456.1 vs. uniprot
Match: A0A6H5L3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H3_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.100e-14
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = 0
Query:   37 LCNELVEDLAAFATLVVS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRGVTGTVFCRRYGRKLADYFQPWGQYGVAVSGGVEVMA 125
            + ++  E LA F+  V      LP +FW   TSA+LSALG+K RP+A G VLR +    FCR+Y + +AD F+   Q+G  V GGVE++A
Sbjct:    1 MSDDFSETLADFSYKVFYYGDELPDLFWGFQTSASLSALGEKKRPIAVGGVLRRIISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVA 90          
BLAST of mRNA_H-elongata_contig68299.14456.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.270e-14
Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 0
Query:   58 LPQVFWTLHTSANLSALGQKARPVACGDVLRGVTGTVFCRRYGRKLADYFQPWGQYGVAVSGGVEVMA 125
            LP  FW LHTSANLSALG+K RP+A G VLR +    FCR+Y   +A+ F+   Q+G  V GGVE++A
Sbjct:   23 LPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVA 90          
BLAST of mRNA_H-elongata_contig68299.14456.1 vs. uniprot
Match: A0A6H5KQE6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE6_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 3.450e-13
Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 0
Query:   58 LPQVFWTLHTSANLSALGQKARPVACGDVLRGVTGTV------------FCRRYGRKLADYFQPWGQYGVAVSGGVEVMA 125
            LP +FW LHTSA+LSALG+K RP+A G VLR +                FCR+Y + +AD F+   Q+G  V GGVE++A
Sbjct:   23 LPDLFWGLHTSASLSALGEKKRPIAVGGVLRRIIXIXXXXXXXXXISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVA 102          
BLAST of mRNA_H-elongata_contig68299.14456.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.740e-12
Identity = 44/131 (33.59%), Postives = 68/131 (51.91%), Query Frame = 0
Query:    2 ENLFEEATVKAVIKKANPQSAAGPSGLRYNHLKAALCNELVEDLAAFAT------LVVSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRGVTGTVFCRRYGRKLADYFQPWGQYGVAVSGGVEVMAL 126
            E  F+   +  VI + +  S AG  G R++HLK+ + N++  +  + A       L+      P  FWTL   ++L ALG+K RPV  G   R +      R +  KL + F+   Q+GVAV+GGVE +A+
Sbjct:   87 ETEFDPQVLLQVINRRSSNSGAGNDGQRFSHLKSIVNNKIGREEFSNAMSPLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAM 217          
BLAST of mRNA_H-elongata_contig68299.14456.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 2.020e-12
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 0
Query:   37 LCNELVEDLAAFATLVVS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRGVTGTVFCRRYGRKLADYFQPWGQYGVAVSGGVEVMA 125
            + +   E LA F+  V      LP   W LHTSANLSALG+K RP+A G VLR +    F R+Y   +A+ F+   Q+G  V GGVE++A
Sbjct:    1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVA 90          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68299.14456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN5.600e-3450.40Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KQ62_9PHAE1.990e-2648.78Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE3.570e-2648.78Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE8.890e-2648.78Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KGJ4_9PHAE3.820e-2547.97Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L3H3_9PHAE1.100e-1444.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSY9_9PHAE1.270e-1454.41Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KQE6_9PHAE3.450e-1346.25Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KR59_9PHAE1.740e-1233.59Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE2.020e-1244.44Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68299contigH-elongata_contig68299:2599..2976 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68299.14456.1mRNA_H-elongata_contig68299.14456.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68299 2599..2976 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68299.14456.1 ID=prot_H-elongata_contig68299.14456.1|Name=mRNA_H-elongata_contig68299.14456.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp
MENLFEEATVKAVIKKANPQSAAGPSGLRYNHLKAALCNELVEDLAAFAT
LVVSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRGVTGTVFCRRYG
RKLADYFQPWGQYGVAVSGGVEVMAL
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