prot_H-elongata_contig68276.14454.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68276.14454.1
Unique Nameprot_H-elongata_contig68276.14454.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length453
Homology
BLAST of mRNA_H-elongata_contig68276.14454.1 vs. uniprot
Match: D7FPJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ7_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 3.030e-84
Identity = 223/490 (45.51%), Postives = 274/490 (55.92%), Query Frame = 0
Query:    5 IVREAARTSQAAFLSSVLPLQDSDVDYDLRTPIASKSEPWNTTT---------------VVRGHTRRQFSSG----SAADEADDPGTASSSVAADQDAAKIWVSLERLQDQSVGLGNAAEHQMCRALELCRDIRVQRWKVGTSASSSSEHERASRLEALESVLRGLEEVLSKRTLIDKAARRDADALGGPATIASMLDGHDVARLAAEEEDAIAA---VEVPAKTPSENCGQGEGTGWLSGAQLRAFAKQIQARSSLEISALESERRKLRIKVEMFQRQVELLQRKGAGSS-APASIE----GGSSAPVGIAARN------GLGF---ANERRFANLQNGRLREERHIKATLEAEVASLRDALEERDGLIDALREAVQSNTPTDQTGGALTSIVTEGSASDISQDEDGTPNEQGKNDTSHYVDQNDTPQDAPESSPRADAV------EQGLAVPGRGVFEPIES---QSRGRYHSRSSRLLSAAGPVSSA 449
            IVR+AARTSQAAFLSSVLP QD D D    T  +  S P+  TT               V  G   R    G    S    A   G+     ++D  AA  W S+ RL+DQ  GLGNAA+HQ+ RAL+LCRD+R Q  K G    S S H RASRL+AL+S L GLEEVLSKR ++DK AR +A+ALGGPA   S+L+  D   +  +++  +AA                     GWL+G+QL+AF K+++ARSS+EISALESERRKLR KVEMFQRQV+LLQR+GAG S APA+      GG  A    AA        G GF   A E+RFA+L + RL EER ++ATLEAE+ASLR  +EE+DGL+ ALREA++S               T  S  D S    GT  E G                 P     AD +      +    VPGRGVF P  S   +SRGRYHSRSSR LSA GPV++A
Sbjct:   35 IVRQAARTSQAAFLSSVLPTQDLDFD----TANSDSSNPFTPTTLPGISLPNGRHRSPVVGPGEPGRAAGLGGGGVSGLGAAISAGSGVGPTSSDTQAAARWASMRRLEDQGAGLGNAADHQLARALQLCRDLRGQ--KAGVGGGSLSVHGRASRLDALQSTLHGLEEVLSKRRVVDKTARAEAEALGGPAAAWSLLND-DEGSVGDKDQTQVAASGRXXXXXXXXXXXXXXXXSGGWLTGSQLKAFEKKVEARSSIEISALESERRKLRSKVEMFQRQVQLLQREGAGHSPAPANGSTGKIGGYPAATAAAATGEGDSGVGGGFGAAAGEKRFADLLDARLGEERIVQATLEAELASLRRTIEEKDGLVGALREALRS-------------AATPASGGDASTARAGTLAEHGA-------------AQPPARRRSADGILTPRSADGRAVVPGRGVFSPQSSDSSRSRGRYHSRSSRFLSAQGPVAAA 491          
BLAST of mRNA_H-elongata_contig68276.14454.1 vs. uniprot
Match: A0A6H5KLE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE5_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 3.050e-80
Identity = 215/488 (44.06%), Postives = 277/488 (56.76%), Query Frame = 0
Query:    1 PALQIVREAARTSQAAFLSSVLPLQDSDVDYDL---------------------RTPIASKSEPWNTTTVVRGHTRRQFSSGSAADEADDPGTASSSVAADQDAAKIWVSLERLQDQSVGLGNAAEHQMCRALELCRDIRVQRWKVGTSASSSSEHERASRLEALESVLRGLEEVLSKRTLIDKAARRDADALGGPATIASMLDGHDVARLAAEEEDAIAAV--EVPAKTPSENCGQGEGTGWLSGAQLRAFAKQIQARSSLEISALESERRKLRIKVEMFQRQVELLQRKGAGSS-APASIEGGSSA--PVGIAAR-----NGLG-----FANERRFANLQNGRLREERHIKATLEAEVASLRDALEERDGLIDALREAVQSNTPTDQTGGALTSIVTEGSASDISQDEDGTPNEQGKNDTSHYVDQNDTPQDAPESSPRADAVEQGLAVPGRGVFEPIESQSR---GRYHSRSSRLLSAAGPVSSA 449
            P  +IVR+AARTSQAAFLSSVLP Q+ D D                        R+P+    EP   + +  G        G+A    +  G  SS    D  AA  W S+ RL+DQ  GLGNAA+HQ+ RAL+LCRD+R    K G    S S HERASRL+AL+S L GLEEVLSKR ++D+ AR +A+ALGGPA++ S+L+G + +    ++    ++   E  A   +   G G G GWL+G+QL+AF K ++AR+S+EISALESERRKLR KVEMFQRQV+LLQR GAG S APA+   G     P   AA      NG G      A E+RFA+L + RL EER ++ATLEAE+ASLR  +EE+DGLI ALREA++S     + G A T+               GT          H   Q+   + + +      + +    VP RGV  P  S S    GRYHSRSSR LSA GPV++A
Sbjct:  275 PTPEIVRQAARTSQAAFLSSVLPTQNLDFDTANSDSSNPFTRAALPESPPNGRHRSPVVGPGEPGRASGIGGGGVSGL---GAAISSGNGVGLTSS----DTRAAARWASMRRLEDQGAGLGNAADHQLARALQLCRDLRGL--KAGMGGGSQSGHERASRLDALQSTLHGLEEVLSKRRVVDQTARAEAEALGGPASVWSLLNGDEGSGTDKDQTQVSSSGRREGAATGTTTAIGGGSG-GWLTGSQLKAFEKNVEARTSIEISALESERRKLRSKVEMFQRQVQLLQRDGAGHSPAPANGSTGKIGGYPAAAAAATSEVDNGAGGRFGAAAGEKRFADLLDARLGEERIVQATLEAELASLRRTIEEKDGLIGALREALRSAATPARGGDAATARA-------------GTL-------AGHGAAQSSARRRSADGMSTPRSADDHAVVPTRGVLLPRSSDSSRSLGRYHSRSSRFLSAQGPVAAA 732          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68276.14454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPJ7_ECTSI3.030e-8445.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLE5_9PHAE3.050e-8044.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 310..330
NoneNo IPR availableCOILSCoilCoilcoord: 241..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68276contigH-elongata_contig68276:393..2843 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68276.14454.1mRNA_H-elongata_contig68276.14454.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68276 393..2843 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68276.14454.1 ID=prot_H-elongata_contig68276.14454.1|Name=mRNA_H-elongata_contig68276.14454.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=453bp
PALQIVREAARTSQAAFLSSVLPLQDSDVDYDLRTPIASKSEPWNTTTVV
RGHTRRQFSSGSAADEADDPGTASSSVAADQDAAKIWVSLERLQDQSVGL
GNAAEHQMCRALELCRDIRVQRWKVGTSASSSSEHERASRLEALESVLRG
LEEVLSKRTLIDKAARRDADALGGPATIASMLDGHDVARLAAEEEDAIAA
VEVPAKTPSENCGQGEGTGWLSGAQLRAFAKQIQARSSLEISALESERRK
LRIKVEMFQRQVELLQRKGAGSSAPASIEGGSSAPVGIAARNGLGFANER
RFANLQNGRLREERHIKATLEAEVASLRDALEERDGLIDALREAVQSNTP
TDQTGGALTSIVTEGSASDISQDEDGTPNEQGKNDTSHYVDQNDTPQDAP
ESSPRADAVEQGLAVPGRGVFEPIESQSRGRYHSRSSRLLSAAGPVSSAL
AGA
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