prot_H-elongata_contig68262.14451.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68262.14451.1
Unique Nameprot_H-elongata_contig68262.14451.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length279
Homology
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: D7FQE0_ECTSI (Polynucleotide adenylyltransferase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQE0_ECTSI)

HSP 1 Score: 501 bits (1289), Expect = 6.630e-175
Identity = 235/281 (83.63%), Postives = 261/281 (92.88%), Query Frame = 0
Query:    1 MLLGLVKDWSFKVAAQNGISREEVSPATLKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEG--FPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIRQ 279
            MLL LVK+WS K+AA+ G+ +EEVSPATLKTFGSYHLGVHTP+ADIDVLCLAPRHC+R +FFTSFC +L  H E++ELFPV EAYTPVIKFKAQGV+IDMLFCSLHY +LP +C+VH++EHLR LDDAGVRSLNGVRV+ELIL+LVPNH AFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVL++KFFLMYHRWKWPNHVSLNELQSL+E ++ EG  FP+H VWNPV NPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR+
Sbjct:   56 MLLKLVKEWSGKIAAEEGLDKEEVSPATLKTFGSYHLGVHTPDADIDVLCLAPRHCSRESFFTSFCQILRNHTEIDELFPVPEAYTPVIKFKAQGVSIDMLFCSLHYPKLPRLCNVHVQEHLRHLDDAGVRSLNGVRVAELILSLVPNHQAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLLTKFFLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAVWNPVANPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIRE 336          
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A6H5KWQ1_9PHAE (Polynucleotide adenylyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ1_9PHAE)

HSP 1 Score: 502 bits (1292), Expect = 4.200e-171
Identity = 236/281 (83.99%), Postives = 261/281 (92.88%), Query Frame = 0
Query:    1 MLLGLVKDWSFKVAAQNGISREEVSPATLKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEG--FPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIRQ 279
            MLL LVK+WS K+AA+ G+ +EEVS ATLKTFGSYHLGVHTP+ADIDVLCLAPRHC+R +FFTSFC +L  H E++ELFPV EAYTPVIKFKAQGV+IDMLFCSLHY +LP  C+VH+EEHLR+LDDAGVRSLNGVRV+ELIL+LVPNH AFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVL++KFFLMYHRWKWPNHVSLNELQSL+E +  EG  FP+HTVWNPV+NPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR+
Sbjct:   56 MLLNLVKEWSGKIAAEEGLDKEEVSTATLKTFGSYHLGVHTPDADIDVLCLAPRHCSRESFFTSFCQILRNHTEIDELFPVPEAYTPVIKFKAQGVSIDMLFCSLHYPKLPRQCNVHVEEHLRYLDDAGVRSLNGVRVAELILSLVPNHEAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLLTKFFLMYHRWKWPNHVSLNELQSLQETNATEGHPFPLHTVWNPVSNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIRE 336          
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A836C8Y5_9STRA (Poly(A) polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Y5_9STRA)

HSP 1 Score: 346 bits (887), Expect = 1.330e-114
Identity = 171/280 (61.07%), Postives = 204/280 (72.86%), Query Frame = 0
Query:    2 LLGLVKDWSFKVAAQNGISREEV-SPATLKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFC-DMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIRQ 279
            L  + + WS  +    GI  + V S ATL+TFGSY LGV+TP+ADID L L PRHC R  FF SFC D L    +V E+FPV EAYTPV+KFK + V +DMLFCSL +A+LP   DV  + HLR LD  GVRSLNGVRV+ELIL LVPN   FRT LRA+KEWARRRGIYSNVLGCLGGVNWAILVAFV Q+YPNA+PS L+ + F +Y +W WP  + +   +       AEG   H VWNP  + RD+AHLMPI+TPAYPAMNSSYNVGEPQ+RL+++
Sbjct:   68 LEAMAQQWSKDLGRSRGIEEQAVQSVATLRTFGSYRLGVNTPDADIDCLLLCPRHCAREDFFNSFCRDYLATRDDVSEVFPVPEAYTPVMKFKMRDVPVDMLFCSLQHAQLPRPLDVQEDRHLRDLDAEGVRSLNGVRVAELILQLVPNQTTFRTALRAIKEWARRRGIYSNVLGCLGGVNWAILVAFVCQKYPNAAPSTLLHRLFRLYFKWSWPMPILITPTRE----EPAEGCTPHAVWNPKVDLRDRAHLMPIVTPAYPAMNSSYNVGEPQLRLLKE 343          
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A067CCL2_SAPPC (Poly(A) polymerase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CCL2_SAPPC)

HSP 1 Score: 303 bits (777), Expect = 4.120e-97
Identity = 157/280 (56.07%), Postives = 198/280 (70.71%), Query Frame = 0
Query:    4 GLVKDWSFKVAAQNGISREEVSPAT----LKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNEL-QSLKENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR 278
            GLV++W+   AA+ G++ EE  PAT    ++TFGSY LGVH+PEADID LCL PRHC R +FF +F   L  HPEV  +  V +AY PVIKFK  G++ID+LF +L+ A +P   DV   ++L  +D+ GVRSLNG RV+E+IL LVPN   FRTTL AVK WAR RGIYSNVLG LGGVNWAILVA V Q YP +    L++KFF +YH+W WPN + LN + +SL + S+         WNP  NPRD++HLMPIITPAYPAMNSSYNV E  + +++
Sbjct:   57 GLVEEWATAEAAKLGVTLEE--PATCFSQIRTFGSYRLGVHSPEADIDTLCLMPRHCLRTSFFQTFPSRLQEHPEVASVQSVPDAYVPVIKFKLSGISIDLLFATLNVAAVPVDIDVLDVKYLVDVDEPGVRSLNGCRVAEMILQLVPNIEQFRTTLVAVKHWARMRGIYSNVLGFLGGVNWAILVARVCQLYPQSLAGTLLTKFFRVYHQWTWPNPILLNRIDESLGDLSIP-------TWNPKLNPRDRSHLMPIITPAYPAMNSSYNVLESTLAMMK 327          
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A1V9YEI6_9STRA (Poly(A) polymerase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YEI6_9STRA)

HSP 1 Score: 297 bits (761), Expect = 1.260e-94
Identity = 154/279 (55.20%), Postives = 195/279 (69.89%), Query Frame = 0
Query:    5 LVKDWSFKVAAQNGISREEVSPAT----LKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLK-ENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR 278
            LV++W+   AA+ G++ E  +PAT    ++TFGSY LGVH+PEADID LCL PRHC R+ FF +F   L  HP V  +  V +AY PVIKFK  G++ID+LF +L  + +PS  DV   +HL  +D+ GVRSLNG RV+E+IL LVPN   FRTTL AVK WAR RGIYSNVLG LGGVNWAILVA V Q YP +    L++KF+ +YH+W WPN + LN L + + E ++A        WNP  NPRD+ HLMPIITPAYPAMNSSYNV E  + +++
Sbjct:   71 LVEEWAVDEAAKAGVTLE--APATRFSQVRTFGSYRLGVHSPEADIDTLCLMPRHCLRINFFQAFPSRLQAHPAVTGVQSVPDAYVPVIKFKVHGISIDLLFVTLALSAVPSDLDVLDSKHLVEVDEQGVRSLNGCRVAEMILQLVPNLEQFRTTLVAVKHWARMRGIYSNVLGFLGGVNWAILVARVCQLYPQSLAGPLLTKFYRVYHQWTWPNPILLNRLDAPQPELAIAS-------WNPKLNPRDRGHLMPIITPAYPAMNSSYNVLECTLHMMK 340          
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A8K1CNK2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNK2_PYTOL)

HSP 1 Score: 292 bits (747), Expect = 2.030e-92
Identity = 142/251 (56.57%), Postives = 183/251 (72.91%), Query Frame = 0
Query:   29 LKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIRQ 279
            LKT+GSY L VH+PEADID LC+AP+HCTR +FF     +L+  P V+++  V +AYTPVI  K  G+ +D++F SL    +P   DV  ++HLR LD++ VRSLNGVRV+E IL LVP    FR+TL AVK WAR RGIYSN LG LGGVNWAILVA + Q YPNA P+ L++KFF +YH W WPN + L+    +  N+   GFP   VWNP+TNPRD+AHLMPIITPAYPAMNSSY+V +  ++++++
Sbjct:   88 LKTYGSYRLQVHSPEADIDTLCIAPKHCTRASFFQKVPILLEATPGVKQVLAVPDAYTPVINMKIDGIAVDLIFVSLPMESIPEDIDVLDDKHLRNLDESSVRSLNGVRVTERILQLVPRQDRFRSTLMAVKYWARLRGIYSNKLGFLGGVNWAILVARICQLYPNALPATLLAKFFRIYHLWAWPNPILLD----VASNTPNMGFP---VWNPMTNPRDRAHLMPIITPAYPAMNSSYSVTQATLQILKR 331          
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A024TB13_9STRA (Poly(A) polymerase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TB13_9STRA)

HSP 1 Score: 287 bits (734), Expect = 5.180e-92
Identity = 147/273 (53.85%), Postives = 187/273 (68.50%), Query Frame = 0
Query:    6 VKDWSFKVAAQNGISREEVSPATLKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR 278
            V+ W+   A + G+  +  S   ++TFGSY LGVH+PEADID LCLAPRHC+RL FFTSF  +L    +V  +  + +AY PVIKF+  GV ID+LF +L  A +P   D+   + LR +D+ GVRSLNG RV+E+IL LVPN   FR TL AVK WAR RGIYSNVLG LGGVNWAILVA V Q YP +    L++KFF +YH+W WPN + LN +    +   AE   + + WNP   PRD+ HLMPIITPA+PAMNSSYNV +  +RL++
Sbjct:   60 VEQWAQNEATKRGLVVDATSLTQIRTFGSYRLGVHSPEADIDTLCLAPRHCSRLGFFTSFPLLLKHQAQVTSVHSIPDAYVPVIKFQVLGVAIDLLFVALDVASVPEDIDLLDPKTLRDVDEPGVRSLNGCRVAEMILQLVPNLDQFRLTLVAVKHWARMRGIYSNVLGFLGGVNWAILVARVCQLYPQSLAGTLLTKFFRVYHQWIWPNPILLNNIMD-DDGKHAELHHLQS-WNPKLYPRDRLHLMPIITPAFPAMNSSYNVLDCTLRLMQ 330          
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A2D4CC13_PYTIN (Polynucleotide adenylyltransferase (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC13_PYTIN)

HSP 1 Score: 290 bits (743), Expect = 1.080e-91
Identity = 150/276 (54.35%), Postives = 189/276 (68.48%), Query Frame = 0
Query:    5 LVKDWSFKVAAQNGISREEVSP--ATLKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR 278
            ++++++       G+S E+       L+TFGSY LGVH PEADID LC+APRHCTR +FF     +L+    V+ L  + +A+ PVIKFK  G  +D+LF +L    +PS  ++  ++ LR LD+  VRSLNGVRV+E I+ LVPN   FRTTL  VK WAR RGIYSNVLG LGGVNWAILVA V Q YPNA P+ L+ KFF +YH W WPN V L+ +     NS   GF   TVWNP+TNPRD++HLMPIITPAYP+MNSSYNV    +R+IR
Sbjct:   65 VLQEYALHEGCLXGMSEEDAVSKLVQLRTFGSYRLGVHAPEADIDTLCIAPRHCTRTSFFQKVPILLEATAGVKHLHVISDAFVPVIKFKLMGFAVDLLFVALSMDSIPSDLNILDDQLLRDLDEQSVRSLNGVRVTERIIQLVPNGDHFRTTLTIVKHWARVRGIYSNVLGFLGGVNWAILVARVCQLYPNALPATLLGKFFRVYHLWSWPNPVLLDNVV----NSPNMGF---TVWNPMTNPRDRSHLMPIITPAYPSMNSSYNVLPCTLRMIR 333          
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A6G0XG51_9STRA (Poly(A) polymerase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XG51_9STRA)

HSP 1 Score: 288 bits (737), Expect = 4.900e-91
Identity = 149/274 (54.38%), Postives = 188/274 (68.61%), Query Frame = 0
Query:    6 VKDWSFKVAAQNGISREEVSPAT-LKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR 278
            V++W+   A + G+  ++++P T L+TFGSY LGVH+PEADID LCLAPRHC R AFFT+F  +L  H  V  +  + +AY PVIKFK   V ID+LF +L  A +P   D+   ++L  +D+ GVRSLNG RV+E+IL LVPN   FRTTL AVK WAR RGIYSNVLG LGG+NWAILVA V Q YP +    L++KFF +YH+W WPN + LN L    ++ L         WNP   PRD+ HLMPIITPAYPAMNSSYNV    +RL++
Sbjct:   60 VEEWADSEATKRGL--DKIAPFTQLRTFGSYRLGVHSPEADIDTLCLAPRHCIRTAFFTTFPSLLKQHECVSSIQSIPDAYVPVIKFKVDDVAIDLLFVTLDLAFVPKDIDLLDTKYLIDVDEPGVRSLNGCRVAEMILQLVPNVDQFRTTLVAVKHWARMRGIYSNVLGFLGGINWAILVARVCQLYPQSLAGTLLTKFFRVYHQWIWPNPILLNNLIDDAQSHLELNLQ---AWNPKLYPRDRLHLMPIITPAYPAMNSSYNVLNCTLRLMQ 328          
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Match: A0A024TBD6_9STRA (Poly(A) polymerase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBD6_9STRA)

HSP 1 Score: 287 bits (734), Expect = 1.710e-90
Identity = 147/273 (53.85%), Postives = 187/273 (68.50%), Query Frame = 0
Query:    6 VKDWSFKVAAQNGISREEVSPATLKTFGSYHLGVHTPEADIDVLCLAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDMLFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHGAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVLMSKFFLMYHRWKWPNHVSLNELQSLKENSLAEGFPMHTVWNPVTNPRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIR 278
            V+ W+   A + G+  +  S   ++TFGSY LGVH+PEADID LCLAPRHC+RL FFTSF  +L    +V  +  + +AY PVIKF+  GV ID+LF +L  A +P   D+   + LR +D+ GVRSLNG RV+E+IL LVPN   FR TL AVK WAR RGIYSNVLG LGGVNWAILVA V Q YP +    L++KFF +YH+W WPN + LN +    +   AE   + + WNP   PRD+ HLMPIITPA+PAMNSSYNV +  +RL++
Sbjct:   60 VEQWAQNEATKRGLVVDATSLTQIRTFGSYRLGVHSPEADIDTLCLAPRHCSRLGFFTSFPLLLKHQAQVTSVHSIPDAYVPVIKFQVLGVAIDLLFVALDVASVPEDIDLLDPKTLRDVDEPGVRSLNGCRVAEMILQLVPNLDQFRLTLVAVKHWARMRGIYSNVLGFLGGVNWAILVARVCQLYPQSLAGTLLTKFFRVYHQWIWPNPILLNNIMD-DDGKHAELHHLQS-WNPKLYPRDRLHLMPIITPAFPAMNSSYNVLDCTLRLMQ 330          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68262.14451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQE0_ECTSI6.630e-17583.63Polynucleotide adenylyltransferase (Fragment) n=1 ... [more]
A0A6H5KWQ1_9PHAE4.200e-17183.99Polynucleotide adenylyltransferase (Fragment) n=1 ... [more]
A0A836C8Y5_9STRA1.330e-11461.07Poly(A) polymerase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A067CCL2_SAPPC4.120e-9756.07Poly(A) polymerase n=2 Tax=Saprolegnia TaxID=4769 ... [more]
A0A1V9YEI6_9STRA1.260e-9455.20Poly(A) polymerase n=1 Tax=Achlya hypogyna TaxID=1... [more]
A0A8K1CNK2_PYTOL2.030e-9256.57Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024TB13_9STRA5.180e-9253.85Poly(A) polymerase n=1 Tax=Aphanomyces invadans Ta... [more]
A0A2D4CC13_PYTIN1.080e-9154.35Polynucleotide adenylyltransferase (Fragment) n=1 ... [more]
A0A6G0XG51_9STRA4.900e-9154.38Poly(A) polymerase n=1 Tax=Aphanomyces euteiches T... [more]
A0A024TBD6_9STRA1.710e-9053.85Poly(A) polymerase n=1 Tax=Aphanomyces invadans Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002934Polymerase, nucleotidyl transferase domainPFAMPF01909NTP_transf_2coord: 21..104
e-value: 1.7E-7
score: 31.4
NoneNo IPR availableGENE3D1.10.1410.10coord: 112..279
e-value: 8.2E-61
score: 206.3
NoneNo IPR availableGENE3D3.30.460.10coord: 12..105
e-value: 4.4E-7
score: 31.9
NoneNo IPR availablePANTHERPTHR10682:SF10HIIRAGI, ISOFORM Dcoord: 4..278
NoneNo IPR availablePANTHERPTHR10682POLY A POLYMERASEcoord: 4..278
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..189
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 190..279
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 6..143
NoneNo IPR availableSUPERFAMILY81631PAP/OAS1 substrate-binding domaincoord: 147..278
NoneNo IPR availableTMHMMTMhelixcoord: 167..189
IPR007012Poly(A) polymerase, central domainPFAMPF04928PAP_centralcoord: 107..278
e-value: 9.5E-64
score: 214.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68262contigH-elongata_contig68262:346..3029 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68262.14451.1mRNA_H-elongata_contig68262.14451.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68262 346..3047 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68262.14451.1 ID=prot_H-elongata_contig68262.14451.1|Name=mRNA_H-elongata_contig68262.14451.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=279bp
MLLGLVKDWSFKVAAQNGISREEVSPATLKTFGSYHLGVHTPEADIDVLC
LAPRHCTRLAFFTSFCDMLDVHPEVEELFPVQEAYTPVIKFKAQGVNIDM
LFCSLHYARLPSMCDVHIEEHLRFLDDAGVRSLNGVRVSELILTLVPNHG
AFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPSVL
MSKFFLMYHRWKWPNHVSLNELQSLKENSLAEGFPMHTVWNPVTNPRDKA
HLMPIITPAYPAMNSSYNVGEPQMRLIRQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002934Polymerase_NTP_transf_dom
IPR007012PolA_pol_cen_dom