prot_H-elongata_contig6822.14448.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6822.14448.1
Unique Nameprot_H-elongata_contig6822.14448.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length397
Homology
BLAST of mRNA_H-elongata_contig6822.14448.1 vs. uniprot
Match: A0A6H5KEE9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEE9_9PHAE)

HSP 1 Score: 387 bits (993), Expect = 1.100e-129
Identity = 226/397 (56.93%), Postives = 279/397 (70.28%), Query Frame = 0
Query:    5 MGLKSCYNKNLDRLGDEITDLICHAQPSMKSDVPATCWSTNSQDVDVALSVLRAAGSSIHDGVTRFNLVFKANPGEEASASMAKEIGGFCQKMVSSLILLSSVGASKAMVKYCTISVRAVLHGLKDLVAALLDTTRRSQVNSLTGMVWQACKELQQAPKTNKLACRRQMMQWSVAIKDTIEEFQEVAKTAAASTSVGKSNAADDAGGTADLVERFGG---LGASGEG--AEEGDFDDFC--GVDAGYSSSELSCVEASLNVLRVFRRCLKAANDALNTLESSQAKLRGDVDEKAEPGGEEWLRQRLRWAHSLQSCLEEINEEAGELGVLLYPPLSTIDLLARADNLERSLNEFCDAFGSPEDGGGKTGSGTGSPAAAPLRSTVGDKLGALRAALGRL 394
            M L      +L+ LG EI  LI H+          TCWS NS+DVDVAL V+ AA  SIHDGVTR NLV+KANP E AS SM++E+GGFCQ+MV+SL LLSSVGASK+MV Y +  VRAVLH +KDL+ ALLD +R +++N LTG VWQ CKELQQAPKTNKLACRRQMMQWSVA+KDTI+EF E AKTAA + + GKS +A D GG   L E+F     +G +GEG    EG FDDF   G+D  Y ++ELSCVEAS++VLRVFRRCLKAAND+LN+L+S + +        A P GE WL+ +L WA S+Q+ L++ NE AGE+GVLLYPPL   +LL RA++LE+SL  F + F +        G GT S   +PLR  V +KLG LRAAL +L
Sbjct:    1 MELNGAVKGHLEGLGKEIDALIGHSMYGKGGTYSPTCWSKNSEDVDVALRVIGAASQSIHDGVTRLNLVYKANPSEVASESMSREMGGFCQQMVASLTLLSSVGASKSMVTYFSAGVRAVLHSVKDLIGALLDPSRHARLNGLTGTVWQTCKELQQAPKTNKLACRRQMMQWSVAVKDTIDEFVEAAKTAAMANA-GKSESAGDKGG---LDEQFAAKVTVGGAGEGEVGAEGTFDDFDFDGMDENYGAAELSCVEASVDVLRVFRRCLKAANDSLNSLDSPEPQEESGAT--AGPAGEGWLQGKLEWAKSVQTHLDDANECAGEVGVLLYPPLDGGELLGRANDLEKSLAAFFEVFSAG-------GEGTNSEMESPLRKAVVEKLGVLRAALEKL 384          
BLAST of mRNA_H-elongata_contig6822.14448.1 vs. uniprot
Match: A0A7S3XYZ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYZ0_HETAK)

HSP 1 Score: 118 bits (295), Expect = 9.830e-26
Identity = 98/300 (32.67%), Postives = 145/300 (48.33%), Query Frame = 0
Query:   42 WSTNSQDVDVALSVLRAAGSSIHDGVTRFNLVFKANPGEEASASMAKEIGGFCQKMVSSLILLSSVGASKAMVKYCTISVRAVLHGLKDLVAALLDTTRRSQVNSLT---GMVWQACKELQQAPKTNKLACRRQMMQWSVAIKDTIEEFQEVAKTAAASTSVGKSNAADDAGGTADLVERFGGLGASGEGAEEGDFDDFCGVDAGYSSSELSCVEASLNVLRVFRRCLKAANDALNTLESSQAKLRGDVDEKAEPGGEEWLRQRLRWAHSLQSCLEEINEEAGELGVLLYPPLSTIDLLA 338
            W + S+D+  AL+VL AA  SIH   T+F L+ K +       S+  EI  FC K+ SS  +  + G+++ + +   I V+AVLH + DLV A      R    +L    G+VW AC +LQ+ PK N+ A R   M WS+ IK T++EFQE+ +  A+  +  +   A+  GG     ER     A  +  +  DF  F   D  Y+  E     A + VL++ RR L+AA DA             D  ++ E         +L W   L    ++  E A +LG+ LYPPL   +L A
Sbjct:  122 WKSPSEDLKTALTVLNAAAGSIHSSATKFGLLAKTSAKAIEIQSLCDEIVDFCDKLTSSFRIAIANGSAEPLSRLLHIKVKAVLHAVCDLVRAAQALGARGGAGTLAPAAGVVWAACDDLQKVPKNNRDAYRFAFMGWSLEIKSTVDEFQELVQ--ASKEAPREPEQAE--GGEQPSEER-----ARLQTMDNNDF--FAMEDENYTLEEAGGAAALVGVLQLTRRALRAAMDATR-----------DACDRTEG--------QLAWVDQLYRRGQDAVELATDLGLCLYPPLERGELEA 391          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6822.14448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KEE9_9PHAE1.100e-12956.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3XYZ0_HETAK9.830e-2632.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13324GCIPcoord: 59..349
e-value: 2.9E-25
score: 89.4
NoneNo IPR availablePANTHERPTHR15492:SF1CYCLIN-D1-BINDING PROTEIN 1coord: 42..390
IPR026907Cyclin-D1-binding protein 1PANTHERPTHR15492CYCLIN D1-BINDING PROTEIN 1coord: 42..390

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6822contigH-elongata_contig6822:5813..10261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6822.14448.1mRNA_H-elongata_contig6822.14448.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6822 5795..10261 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6822.14448.1 ID=prot_H-elongata_contig6822.14448.1|Name=mRNA_H-elongata_contig6822.14448.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=397bp
MEEKMGLKSCYNKNLDRLGDEITDLICHAQPSMKSDVPATCWSTNSQDVD
VALSVLRAAGSSIHDGVTRFNLVFKANPGEEASASMAKEIGGFCQKMVSS
LILLSSVGASKAMVKYCTISVRAVLHGLKDLVAALLDTTRRSQVNSLTGM
VWQACKELQQAPKTNKLACRRQMMQWSVAIKDTIEEFQEVAKTAAASTSV
GKSNAADDAGGTADLVERFGGLGASGEGAEEGDFDDFCGVDAGYSSSELS
CVEASLNVLRVFRRCLKAANDALNTLESSQAKLRGDVDEKAEPGGEEWLR
QRLRWAHSLQSCLEEINEEAGELGVLLYPPLSTIDLLARADNLERSLNEF
CDAFGSPEDGGGKTGSGTGSPAAAPLRSTVGDKLGALRAALGRLES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026907CCNDBP1