prot_H-elongata_contig68117.14440.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68117.14440.1
Unique Nameprot_H-elongata_contig68117.14440.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length216
Homology
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BLAST of mRNA_H-elongata_contig68117.14440.1 vs. uniprot
Match: D8LEV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEV7_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 4.260e-21
Identity = 84/221 (38.01%), Postives = 112/221 (50.68%), Query Frame = 0 
Query:    1 AAINLSYSLRRYAGIQSYVLPLDPDLPDYLANV------GRSERAALASAAAAASTSTPASGMPPLSDPSLVDNTD--RKPFGRRSAVEARSDSREGRRL-------QKKSAFLRGVDGGVERRLDPVMHGWSPPVSGPLAQVQQRFNDRPSREQFRELSARGGRFVRTSLQCPTELVLLVVDGRRQAELLGPLYRGLVESAVAGHAEGRDVGAEVFVAVV 206
            AA+ LSYSLRRYAG+ SYVLP DP LP+Y  N+      G+ +   ++ AA AA+ +   +           D  D  R+   R  AV A         L        + S  L+   GG   R D    G      G  + + +R ++   R QFR+LSARGG+F RT+   P +LVL+VVDGR QAELLGPLYR +VE    G        AEVF+ ++
Sbjct:  360 AALALSYSLRRYAGVPSYVLPSDPALPEYSGNMSAGLPPGKLDIQGISKAAEAAAVAAGFARRKKTFRRRTRDAPDQSRRRLARDGAVAASXXXXXXXXLGSLASPSDRNSRALQAASGG---RGDASARG---DTDGSPSSLVRRLDEPQLRAQFRDLSARGGQFFRTADHSPEDLVLIVVDGRDQAELLGPLYRQIVE----GGXXXXXXXAEVFIVLI 570
[Close]
BLAST of mRNA_H-elongata_contig68117.14440.1 vs. uniprot
Match: A0A6H5KSC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC9_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 5.010e-20
Identity = 84/204 (41.18%), Postives = 109/204 (53.43%), Query Frame = 0 
Query:    1 AAINLSYSLRRYAGIQSYVLPLDPDLPDYLANV------GRSERAALASAAAAASTSTPASGMPPLSDPSLVDNTDRKPFGRRS---AVEARSDSREGRRL-------QKKSAFLRGVDGG---VERRLDPVMHGWSPPVSGPLAQVQQRFNDRPSREQFRELSARGGRFVRTSLQCPTELVLLVVDGRRQAELLGPLYRGLVE 185
            AA+ LSYSLRRYAG+ SYVLP DP LP+Y  N+      G+ +   ++ AA AA+    A+G              +K F RR+   AV A +  +  RRL        + S  L+   GG      R D          S P + V+ R ++   R QFR+LSARGG+F RT+   P  LVL+VVDGR QAELLGPLYR +VE
Sbjct:  478 AALALSYSLRRYAGVPSYVLPSDPALPEYSGNMSAGLPPGKLDVQGISKAAEAAAI---AAGFARR----------KKMFRRRARLGAVVASAPDQSRRRLGSLASPSDRNSRSLQAASGGRGDASAREDTD--------SSPSSLVR-RLDEPQLRAQFRDLSARGGQFFRTADHSPENLVLIVVDGRDQAELLGPLYREIVE 659
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68117.14440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEV7_ECTSI4.260e-2138.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSC9_9PHAE5.010e-2041.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68117contigH-elongata_contig68117:477..1124 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68117.14440.1mRNA_H-elongata_contig68117.14440.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68117 477..1124 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68117.14440.1 ID=prot_H-elongata_contig68117.14440.1|Name=mRNA_H-elongata_contig68117.14440.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp
AAINLSYSLRRYAGIQSYVLPLDPDLPDYLANVGRSERAALASAAAAAST
STPASGMPPLSDPSLVDNTDRKPFGRRSAVEARSDSREGRRLQKKSAFLR
GVDGGVERRLDPVMHGWSPPVSGPLAQVQQRFNDRPSREQFRELSARGGR
FVRTSLQCPTELVLLVVDGRRQAELLGPLYRGLVESAVAGHAEGRDVGAE
VFVAVVGLETYFEHI*
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