prot_H-elongata_contig68067.14434.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68067.14434.1
Unique Nameprot_H-elongata_contig68067.14434.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
BLAST of mRNA_H-elongata_contig68067.14434.1 vs. uniprot
Match: A0A6H5L587_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L587_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 3.900e-76
Identity = 112/129 (86.82%), Postives = 121/129 (93.80%), Query Frame = 0
Query:    6 CVSLSAPTHTCLSKILESDCPICGNSIFTSTSQVKGLRCGHLMHLRCYKDYIRRADSREFWYRCPVCRKSIEDMREYFSQMDAVVASQPMPEEYSGWKTKVLCHDCERYTEVPYHFCYLKCGACGSYNT 134
            CVS++AP+HTCLSK LESDCPIC NS+FTSTSQVKGLRCGH MHL CYK+YI RA+SREFWYRCP+CRKS+EDMREYFSQMDAVVASQPMPE Y+GWKTK LCHDCERYTEVPYHF YLKCGACGSYNT
Sbjct:  964 CVSMNAPSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMHLACYKEYIGRAESREFWYRCPICRKSMEDMREYFSQMDAVVASQPMPEAYAGWKTKALCHDCERYTEVPYHFYYLKCGACGSYNT 1092          
BLAST of mRNA_H-elongata_contig68067.14434.1 vs. uniprot
Match: A0A7S4DJ29_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJ29_HETAK)

HSP 1 Score: 184 bits (468), Expect = 5.670e-56
Identity = 84/135 (62.22%), Postives = 100/135 (74.07%), Query Frame = 0
Query:    1 MKCNACVSLSAPTHTCLSKILESDCPICGNSIFTSTSQVKGLRCGHLMHLRCYKDYIRRADSREFWYRCPVCRKSIEDMREYFSQMDAVVASQPMPEEYSGWKTKVLCHDCERY-TEVPYHFCYLKCGACGSYNT 134
            MKCN CV+LSA  H CL K LE DCPIC   +F ST + KGLRCGHL+HL CY+ Y+ +   + FW+RCPVCRKS++DM EYFSQ+DAVVA+QPMP E  G + +VLC DCE    EVP+HF Y KC  CGSYNT
Sbjct:  108 MKCNCCVALSAEPHRCLPKALEGDCPICSEPLFVSTREYKGLRCGHLLHLDCYQAYVAQGGEQLFWFRCPVCRKSMDDMTEYFSQLDAVVAAQPMPPELRGRRVRVLCLDCEAGGQEVPHHFLYHKCPRCGSYNT 242          
BLAST of mRNA_H-elongata_contig68067.14434.1 vs. uniprot
Match: A0A835Z9Z4_9STRA (Zinc ion binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z4_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.280e-55
Identity = 82/132 (62.12%), Postives = 102/132 (77.27%), Query Frame = 0
Query:    5 ACVSL-SAPTHTCLSKILESDCPICGNSIFTSTSQVKGLRCGHLMHLRCYKDYIRRADSREFWYRCPVCRKSIEDMREYFSQMDAVVASQPMPEEYSGWKTKVLCHDCERYTEVPYHFC-YLKCGACGSYNT 134
            ACV++ SA TH C++  LES+CPIC   +F ST QVKGLRCGH +HL CY++Y+R A+ +  WYRCP+C +S+EDM EYF Q+DAVVA+QPMP EY+G + KVLCHDCE +T VPYH   Y KC AC SYNT
Sbjct:  119 ACVTVESADTHRCVTHSLESNCPICSTGMFESTQQVKGLRCGHFLHLNCYREYVRHAEEQAHWYRCPICLRSMEDMTEYFGQLDAVVAAQPMPPEYAGRRAKVLCHDCEAFTTVPYHMSGYHKCLACSSYNT 250          
BLAST of mRNA_H-elongata_contig68067.14434.1 vs. uniprot
Match: A0A7S4R513_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R513_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.910e-43
Identity = 69/134 (51.49%), Postives = 93/134 (69.40%), Query Frame = 0
Query:    1 MKCNACVSLSAPTHTCLSKILESDCPICGNSIFTSTSQVKGLRCGHLMHLRCYKDYIRRADSREFWYRCPVCRKSIEDMREYFSQMDAVVASQPMPEEYSGWKTKVLCHDCERYTEVPYHFCYLKCGACGSYNT 134
            M+CNACVSL+  TH C+ + L+ +CPIC  S+F ST  ++GL+CGH+MHL C+  Y+ RA S    Y CP+C+KSIEDM++YF+ +DA +  QPMP  YS   + + C DC +  +VPYHF   KC  CGSYNT
Sbjct:  141 MRCNACVSLADDTHHCIPQSLQGNCPICHESMFQSTEPLRGLKCGHVMHLSCFTMYM-RAQS----YTCPLCKKSIEDMKDYFALLDAAIRMQPMPAAYSATVSDIYCQDCGKRGKVPYHFVGCKCSYCGSYNT 269          
BLAST of mRNA_H-elongata_contig68067.14434.1 vs. uniprot
Match: A0A3N6RF96_BRACR (Uncharacterized protein n=1 Tax=Brassica cretica TaxID=69181 RepID=A0A3N6RF96_BRACR)

HSP 1 Score: 151 bits (382), Expect = 7.000e-43
Identity = 70/134 (52.24%), Postives = 89/134 (66.42%), Query Frame = 0
Query:    1 MKCNACVSLSAPTHTCLSKILESDCPICGNSIFTSTSQVKGLRCGHLMHLRCYKDYIRRADSREFWYRCPVCRKSIEDMREYFSQMDAVVASQPMPEEYSGWKTKVLCHDCERYTEVPYHFCYLKCGACGSYNT 134
            MKCNAC++ S   H C  K LE +CPIC   IFTS+S VK L CGHLMH +C+KDY          Y CPVC KS+ DM+ YFS +DA++A + MP+EY+     +LC+DC R  E PYH+ Y KC +CGSYN+
Sbjct:  157 MKCNACMARSLKEHVCREKCLEDNCPICHEYIFTSSSPVKALPCGHLMHSKCFKDYTCSH------YTCPVCSKSLGDMQVYFSMLDALLAEEKMPDEYTNKTQVILCNDCGRKGEAPYHWLYHKCSSCGSYNS 284          
BLAST of mRNA_H-elongata_contig68067.14434.1 vs. uniprot
Match: A0A6T6KU80_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6KU80_9RHOD)

HSP 1 Score: 147 bits (370), Expect = 1.060e-42
Identity = 62/134 (46.27%), Postives = 92/134 (68.66%), Query Frame = 0
Query:    1 MKCNACVSLSAPTHTCLSKILESDCPICGNSIFTSTSQVKGLRCGHLMHLRCYKDYIRRADSREFWYRCPVCRKSIEDMREYFSQMDAVVASQPMPEEYSGWKTKVLCHDCERYTEVPYHFCYLKCGACGSYNT 134
            MKCNAC+SLS   H C+ K++ES+CPIC N +F+ST+ +K L CGHLMH  CY  Y +       ++RCPVC+KS+EDM +  ++++ ++  +PMP EY   +  V C+DC++ + V +HF YL+C  C S+NT
Sbjct:   13 MKCNACLSLSRREHKCIEKVMESNCPICNNYLFSSTTPIKYLLCGHLMHKHCYSQYAK------MYHRCPVCQKSLEDMSDQIARLNVMMTREPMPSEYRSARATVHCNDCQKESTVHFHFLYLRCAFCQSHNT 140          
BLAST of mRNA_H-elongata_contig68067.14434.1 vs. uniprot
Match: A0A6U3SMK8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SMK8_9STRA)

HSP 1 Score: 152 bits (385), Expect = 3.760e-42
Identity = 69/134 (51.49%), Postives = 93/134 (69.40%), Query Frame = 0
Query:    1 MKCNACVSLSAPTHTCLSKILESDCPICGNSIFTSTSQVKGLRCGHLMHLRCYKDYIRRADSREFWYRCPVCRKSIEDMREYFSQMDAVVASQPMPEEYSGWKTKVLCHDCERYTEVPYHFCYLKCGACGSYNT 134
            M+CNACVSL+  TH C+ + L+ +CPIC  S+F ST  ++GL+CGH+MHL C+  Y+ RA S    Y CP+C+KSIEDM++YF+ +DA +  QPMP  YS   + + C DC +  +VPYHF   KC  CGSYNT
Sbjct:  271 MRCNACVSLADDTHHCIPQSLQGNCPICHESMFQSTEPLRGLKCGHVMHLSCFTMYM-RAQS----YTCPLCKKSIEDMKDYFALLDAAIRMQPMPAAYSATVSDIYCQDCGKRGKVPYHFVGCKCSYCGSYNT 399          
BLAST of mRNA_H-elongata_contig68067.14434.1 vs. uniprot
Match: A0A7S1GIX4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIX4_CYCTE)

HSP 1 Score: 150 bits (378), Expect = 8.500e-42
Identity = 66/134 (49.25%), Postives = 90/134 (67.16%), Query Frame = 0
Query:    1 MKCNACVSLSAPTHTCLSKILESDCPICGNSIFTSTSQVKGLRCGHLMHLRCYKDYIRRADSREFWYRCPVCRKSIEDMREYFSQMDAVVASQPMPEEYSGWKTKVLCHDCERYTEVPYHFCYLKCGACGSYNT 134
            M+CNACVSL    H C+ + L++ CPIC  S+F ST  +KGL+CGH++HL C+  Y+R        Y CP+C+KS+EDMREYF+ +DA V  QPMP  +    +++ C DC + ++VPYHF   KC  CGSYNT
Sbjct:  190 MRCNACVSLEDTDHHCIPQRLQATCPICHESMFQSTEPLKGLKCGHVLHLSCFTRYMRGQS-----YTCPLCKKSVEDMREYFTMLDAAVRMQPMPAAFLSTVSEIYCQDCGQSSKVPYHFVGCKCAHCGSYNT 318          
BLAST of mRNA_H-elongata_contig68067.14434.1 vs. uniprot
Match: A0A7S0GAB6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAB6_9STRA)

HSP 1 Score: 152 bits (384), Expect = 4.200e-41
Identity = 67/134 (50.00%), Postives = 91/134 (67.91%), Query Frame = 0
Query:    1 MKCNACVSLSAPTHTCLSKILESDCPICGNSIFTSTSQVKGLRCGHLMHLRCYKDYIRRADSREFWYRCPVCRKSIEDMREYFSQMDAVVASQPMPEEYSGWKTKVLCHDCERYTEVPYHFCYLKCGACGSYNT 134
            M+CNACVSL    H C+++ L+ +CPIC  S+F ST  ++GL+CGH+MHL C+  Y+R        Y CP+C+KS++DM+EYFSQ+DA +  QPMP  Y+   +K+ C DC +  EV YHF   KC  CGSYNT
Sbjct:  397 MRCNACVSLKDNNHVCITQRLQGNCPICHESMFESTEPLRGLKCGHVMHLSCFNLYMRSQT-----YTCPLCKKSVDDMKEYFSQLDAAIRMQPMPPAYANVTSKIHCQDCGKLGEVNYHFVGCKCTFCGSYNT 525          
BLAST of mRNA_H-elongata_contig68067.14434.1 vs. uniprot
Match: A0A7S4VUG9_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VUG9_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.540e-40
Identity = 69/134 (51.49%), Postives = 93/134 (69.40%), Query Frame = 0
Query:    1 MKCNACVSLSAPTHTCLSKILESDCPICGNSIFTSTSQVKGLRCGHLMHLRCYKDYIRRADSREFWYRCPVCRKSIEDMREYFSQMDAVVASQPMPEEYSGWKTKVLCHDCERYTEVPYHFCYLKCGACGSYNT 134
            M+CNACVSL+  TH C+ + L+ +CPIC  S+F ST  ++GL+CGH+MHL C+  Y+ RA S    Y CP+C+KSIEDM++YF+ +DA +  QPMP  YS   + + C DC +  +VPYHF   KC  CGSYNT
Sbjct: 1008 MRCNACVSLADDTHHCIPQSLQGNCPICHESMFQSTEPLRGLKCGHVMHLSCFTMYM-RAQS----YTCPLCKKSIEDMKDYFALLDAAIRMQPMPAAYSATVSDIYCQDCGKRGKVPYHFVGCKCSYCGSYNT 1136          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68067.14434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L587_9PHAE3.900e-7686.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4DJ29_HETAK5.670e-5662.22Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835Z9Z4_9STRA1.280e-5562.12Zinc ion binding protein n=1 Tax=Tribonema minus T... [more]
A0A7S4R513_9STRA1.910e-4351.49Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A3N6RF96_BRACR7.000e-4352.24Uncharacterized protein n=1 Tax=Brassica cretica T... [more]
A0A6T6KU80_9RHOD1.060e-4246.27Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A6U3SMK8_9STRA3.760e-4251.49Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1GIX4_CYCTE8.500e-4249.25Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S0GAB6_9STRA4.200e-4150.00Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4VUG9_9STRA2.540e-4051.49Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 25..72
e-value: 1.6E-5
score: 34.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 24..73
e-value: 1.8E-8
score: 34.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 25..73
score: 11.206
IPR039512RCHY1, zinc-ribbonPFAMPF14599zinc_ribbon_6coord: 78..134
e-value: 2.5E-24
score: 85.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 13..94
e-value: 1.8E-11
score: 45.1
NoneNo IPR availableGENE3D2.20.28.10coord: 102..134
e-value: 1.3E-10
score: 42.1
NoneNo IPR availablePANTHERPTHR21319RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1coord: 1..134
NoneNo IPR availablePANTHERPTHR21319:SF39coord: 1..134
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 23..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68067contigH-elongata_contig68067:1..3177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68067.14434.1mRNA_H-elongata_contig68067.14434.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68067 1..3192 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68067.14434.1 ID=prot_H-elongata_contig68067.14434.1|Name=mRNA_H-elongata_contig68067.14434.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
MKCNACVSLSAPTHTCLSKILESDCPICGNSIFTSTSQVKGLRCGHLMHL
RCYKDYIRRADSREFWYRCPVCRKSIEDMREYFSQMDAVVASQPMPEEYS
GWKTKVLCHDCERYTEVPYHFCYLKCGACGSYNT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR039512RCHY1_zinc-ribbon
IPR013083Znf_RING/FYVE/PHD