prot_H-elongata_contig68063.14433.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68063.14433.1
Unique Nameprot_H-elongata_contig68063.14433.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length219
Homology
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BLAST of mRNA_H-elongata_contig68063.14433.1 vs. uniprot
Match: D8LBB1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBB1_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 3.950e-45
Identity = 113/226 (50.00%), Postives = 136/226 (60.18%), Query Frame = 0 
Query:    1 VEQNAVEVRGAAATEFVSRWLRRNLPIALPVLRAFVLVTGDAEQEQ---GCRQPGGSPPV---DGWVVVDDVADPSAVAVVSRSAEQTMHRITLFSLNANAGAALAAAVVQPGAAGLVARGTLEASAPPERCGDREKGSGASSSSSRGLGSMISGDGGRNSYRAPR-LIFESLDSRILDAALISTMERLGLGVKSRSRSGFWRLPPGVALTAPDASALNVSASYRP 219
            VE    E+ G AATEFVSRWLR NLPI LP L A  L+ G   Q+    G R   G        G  + D VA+PS+VAVVS S EQ MHR+ LFSL+AN+GAALAAAVVQPGA GL+      A+      G+     G +S+ +RG    +SG        + R ++FESLDSRIL+ AL+STM RLGLG+K RSRSG W+L PG  L A D S    SA  RP
Sbjct:  113 VESPVQEITGVAATEFVSRWLRSNLPITLPALNALKLIEGGCAQQHQRIGSRSGDGQEQRRVRGGRALADSVAEPSSVAVVSCSPEQGMHRVNLFSLSANSGAALAAAVVQPGAVGLLVPPVGAAA-----LGEETVARGYNSNDTRGSSGEVSGRRSTGPGCSDRGVVFESLDSRILEDALVSTMRRLGLGLKKRSRSGMWKLRPGAVLPAGDTSI--TSAEVRP 331
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68063.14433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBB1_ECTSI3.950e-4550.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68063contigH-elongata_contig68063:1958..3126 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68063.14433.1mRNA_H-elongata_contig68063.14433.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68063 1958..3126 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68063.14433.1 ID=prot_H-elongata_contig68063.14433.1|Name=mRNA_H-elongata_contig68063.14433.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bp
VEQNAVEVRGAAATEFVSRWLRRNLPIALPVLRAFVLVTGDAEQEQGCRQ
PGGSPPVDGWVVVDDVADPSAVAVVSRSAEQTMHRITLFSLNANAGAALA
AAVVQPGAAGLVARGTLEASAPPERCGDREKGSGASSSSSRGLGSMISGD
GGRNSYRAPRLIFESLDSRILDAALISTMERLGLGVKSRSRSGFWRLPPG
VALTAPDASALNVSASYRP
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