prot_H-elongata_contig6797.14413.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE) HSP 1 Score: 226 bits (577), Expect = 2.980e-69 Identity = 113/210 (53.81%), Postives = 149/210 (70.95%), Query Frame = 0
Query: 1 MYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINEF 196
MY+ QV +YD +YA QLAR M+KP K H+ AK+ LRYLAG+ +FSITY++G NPDN KSTSSY+ +LAN P+SF+ G+Q LTA STMEAELVA+ AMKE++FC N+M ELGF K F ++PVY +NT+ LH N++ S R KHIALR+ F++ELV EG+++IH+ TE L D+GT + +KHR L+ LIN F
Sbjct: 226 MYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNF 435
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE) HSP 1 Score: 218 bits (554), Expect = 1.290e-68 Identity = 110/210 (52.38%), Postives = 144/210 (68.57%), Query Frame = 0
Query: 1 MYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINEF 196
MY+ QV +YD +YA LAR M+KP K H AK LRYLAG+ +FSITY++G NPDN KSTSSY+ +LAN P+SF+ G+Q LTA STMEAELVA+ AMKE++FC N+M ELGF K F ++PVY +NT+ LH N++ S R KHIALR+ F++ELV EG+++IH+ TE L +GT + +KHR L+ IN F
Sbjct: 1 MYIAQVLRYDIMYATGHLARPMAKPSKVHTVTAKQTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTKHFNKHRFKHLMDRINNF 210
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE) HSP 1 Score: 223 bits (568), Expect = 6.750e-66 Identity = 112/208 (53.85%), Postives = 148/208 (71.15%), Query Frame = 0
Query: 1 MYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLIN 194
MY+ QV +YD +YA QLAR M+KP K H+ AK+ LRYLAG+ +FSITY++G NPDN KSTSSY+ +LAN P+SF+ G+Q LTA STMEAELVA+ AMKE++FC N+M ELG K F ++PVY +NT+ LH N++ S R KHIALR+ F++ELV EG+++IH+V TE L D+GT + +KHR L+ LIN
Sbjct: 447 MYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLIN 654
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE) HSP 1 Score: 227 bits (579), Expect = 9.630e-66 Identity = 113/210 (53.81%), Postives = 150/210 (71.43%), Query Frame = 0
Query: 1 MYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINEF 196
MY+ QV +YD +YA QLAR M+KP K H+ AK+ LRYLAG+ +FSITY++G NPDN KSTSSY+ +LAN P+SF+ G+Q LTA STMEAELVA+ AMKE++FC N+M ELGF K F ++PVY +NT+ LH N++ S R KHIALR+ F++ELV EG+++IH+V+TE L D+GT + + HR L+ LIN F
Sbjct: 786 MYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNF 995
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 223 bits (567), Expect = 1.050e-63 Identity = 112/210 (53.33%), Postives = 148/210 (70.48%), Query Frame = 0
Query: 1 MYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINEF 196
MY+ QV +YD +YA QLAR M+KP K H+ AK+ LRYLAG+ +FSITY++G NPDN KSTSSY+ +LAN P+SF+ G+Q LTA STMEAELVA+ AM E++F N+M ELGF K F ++PVY +NT+ LH N++ S R KHIALR+ F++ELV EG+++IH+V TE L D+GT + +KHR L+ LIN F
Sbjct: 1455 MYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE) HSP 1 Score: 219 bits (559), Expect = 5.730e-63 Identity = 110/209 (52.63%), Postives = 150/209 (71.77%), Query Frame = 0
Query: 1 MYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINE 195
+YL Q+++YD +Y +QLAR MS P K H+ AK++LRYL+GS +FSITY+RG NPDN KS SSYI++++ P+SFK G+QSLTA ST+EAELVAA AMKE++FC N+M ELGF FR P+YIN T+ LHV N+T S R KH+ALR+ +++E+VKEG+++IH++ TE L D+GT +L+K RH LI I +
Sbjct: 480 IYLAQITRYDIMYCASQLARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYIN-TATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHLNKQRHQCLIDKIKK 687
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE) HSP 1 Score: 208 bits (530), Expect = 1.060e-59 Identity = 104/210 (49.52%), Postives = 145/210 (69.05%), Query Frame = 0
Query: 1 MYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINEF 196
MYL QV++YD +Y +Q AR MS P K H+ AK++LRYL+GS +FSITY+RG N DN KS SSYI++++ P S K G+QSLTA ST+EAELVA+ AMKE +FC N+M ELGF F P++I++T+ L+V N+T S KH+ALR+ +++++VKEG+++IH++ TE L D+GT YL+K RH +LI I F
Sbjct: 567 MYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNKQRHQYLIDKIKNF 776
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE) HSP 1 Score: 198 bits (504), Expect = 3.810e-56 Identity = 100/212 (47.17%), Postives = 139/212 (65.57%), Query Frame = 0
Query: 1 MYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIHFVKTEHQLTDLGTTYLSKHRHHFLIKLINEFRA 198
+YL Q+ +YD +YA +QLAR M+KP K H+ AK RYLAG+ F I Y+RG NPDN KSTSS++ +L + P++FK G+QSLT QSTME ELVAA A+KE++FC N++ ELGF K +VP+Y +NT+ LH N++ S KHIALR+ F++ELV EG++ IH+V + D+GT +L+K R L+ +I F
Sbjct: 509 IYLSQILRYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHLNKDRFQLLLNIIKNFNV 720
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5KNV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV2_9PHAE) HSP 1 Score: 178 bits (452), Expect = 2.350e-52 Identity = 91/163 (55.83%), Postives = 116/163 (71.17%), Query Frame = 0
Query: 1 MYLVQVSQYDTLYAVNQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALR 149
MY+ QV +YD +YA QLAR M+KP K H+ AK+ LRYLAG+ +FSITY++G NPDN KSTSSY+ +LAN P+SF+ G+Q LTA STMEAELVA+ AMKE++FC N+M ELGF K F ++PVY +NT+ LH N++ S R KHIALR
Sbjct: 103 MYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALR 265
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE) HSP 1 Score: 165 bits (417), Expect = 4.500e-45 Identity = 87/164 (53.05%), Postives = 114/164 (69.51%), Query Frame = 0
Query: 16 NQLAREMSKPLKAHIRVAKYVLRYLAGSANFSITYRRG--------------NPDNDKSTSSYIVILANEPISFKVGVQSLTAQSTMEAELVAATTAMKESLFCRNVMMELGFAKGFRRVPVYINNTSALHVAVNKTSSPRAKHIALRYVFVQELVKEGQVTIH 165
+QLAR MSK KAH+ AK++LR G+ +F ITY+RG NPDN +STSSY+++++ P+SFK G+Q LT STMEAEL+AA MKE++FC N+M ELGF + F +VP+YINNT+ LHV N+ S R KHIAL + V+ELVKEG +TIH
Sbjct: 340 SQLARVMSKAAKAHMGAAKHLLR---GTQDFCITYKRGGFKLTAFSDANWESNPDNARSTSSYMIMMSKAPVSFKTGLQDLTVMSTMEAELLAAALTMKEAVFCSNMMTELGFGQQFGQVPLYINNTATLHVIGNQAYSSRTKHIALLFFCVRELVKEGAITIH 500 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6797.14413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig6797.14413.1 ID=prot_H-elongata_contig6797.14413.1|Name=mRNA_H-elongata_contig6797.14413.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|