prot_H-elongata_contig67942.14407.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67942.14407.1
Unique Nameprot_H-elongata_contig67942.14407.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length180
Homology
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: B3VMZ8_FUCSE (Heat shock protein 20 n=2 Tax=Fucus serratus TaxID=87148 RepID=B3VMZ8_FUCSE)

HSP 1 Score: 293 bits (749), Expect = 4.060e-99
Identity = 145/178 (81.46%), Postives = 165/178 (92.70%), Query Frame = 0
Query:    1 MSITRTGSIDPFRHAMHEVFDSMERDLMAPSGMSSRFPTTDSPGRSISLFSAIPTVGGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPIGD 178
            MS++R GSIDPFR AMH+VFDSMERDLMAPSGMSSRF T D PG S++L SA+P++G +GGLGMNLDFHET++G+ELSADLPGMKKEDI VDID+ESGVLTVTGER+QEREEKSEGDNEQRKYHF+ERSYGKTTRSVRLPDTA  SKASA Y++GVLK+NFPKREP S+RR+QIPIGD
Sbjct:    1 MSLSRAGSIDPFRRAMHDVFDSMERDLMAPSGMSSRFHTMDFPGSSVALVSAVPSMGVEGGLGMNLDFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPIGD 178          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: D7FUU6_ECTSI (Small heat shock protein heat shock protein 20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU6_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 4.200e-56
Identity = 94/165 (56.97%), Postives = 123/165 (74.55%), Query Frame = 0
Query:   16 MHEVFDSMERDLMAPSGMSSRFPTTDSPGRSISLFSAIPTV---GGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPIG 177
            +++VF S+ER+++AP G++SRFPTT        +F   PT     G   LGM+LDFHET +GFEL ADLPGMKKED+++D+D ESGVLTV+GER+ E+EEK +G +  RKYHFVERSYGKT+RSVRLP+ AD + A+A   DGVL + FPK+E   S R +IP+G
Sbjct:   20 INDVFGSIEREMLAPWGLASRFPTTRD------MFPTFPTSLFGDGSRSLGMSLDFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSEKEEKGDGKDGDRKYHFVERSYGKTSRSVRLPEAADTATANADLTDGVLTITFPKKEAPVSSRFRIPLG 178          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: A0A6H5KKF0_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF0_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 7.190e-48
Identity = 86/153 (56.21%), Postives = 111/153 (72.55%), Query Frame = 0
Query:   27 LMAPSGMSSRFPTTDS--PGRSISLFSAIPTVGGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPIG 177
            ++AP G++ RFPT     P  S SLF       G   L MNLDFHET +GFEL ADLPGMK+ED+++D+D ESGVLTV+GER+ +REEK +  +  RKYHFVERSYGKT+RSVRLP+ A+ + A+A   DGVL + FPK+E  +S R +IP+G
Sbjct:    1 MLAPWGLAFRFPTARDMVPSVSSSLFRD-----GSRSLDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSKREEKRDDKDGDRKYHFVERSYGKTSRSVRLPEAANTANANADLTDGVLTITFPKKEAPASSRFRIPLG 148          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: A0A6H5JFM4_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM4_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 8.140e-47
Identity = 93/202 (46.04%), Postives = 120/202 (59.41%), Query Frame = 0
Query:   18 EVFDSMERDLMAPSGMSSRFPTTDS------------------------------------------PGRSISLFSAIPTVGGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPIG 177
            +VF S+ER+++AP G++SRFPT                                             P  S SLF       G   L MNLDFHET +GFEL ADLPGMK+ED+++D+D ESGVLTV+GER+ EREEK +  +  RKYHFVERSYGKT+RSVRLP+ A+ + A+A   DGVL + FPK+E  +S R +IP+G
Sbjct:    7 DVFGSIEREMLAPWGLASRFPTASHMRYSTLRVHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMVPSVSSSLFRD-----GSRSLDMNLDFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSEREEKRDDKDGDRKYHFVERSYGKTSRSVRLPEAANTANANADLTDGVLTITFPKKEAPASSRFRIPLG 203          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: A0A0S7YIY3_9DELT (SHSP domain-containing protein n=1 Tax=Deltaproteobacteria bacterium SG8_13 TaxID=1703398 RepID=A0A0S7YIY3_9DELT)

HSP 1 Score: 100 bits (250), Expect = 5.740e-24
Identity = 63/167 (37.72%), Postives = 87/167 (52.10%), Query Frame = 0
Query:   10 DPFRHAMHEVFDSMERDLMAPSGMSSRFPTTDSPGRSISLFSAIPTVGGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPI 176
            DPFR  M ++FD   R L  P   S     T                   G     +D  ET   F + A++P ++KED+ V +DN  G+LT+ GER+QE+EEK+      +KYH VER YG  TRS  LPD  D SK +AA+ DG+L L  PK E +  + I++ +
Sbjct:    7 DPFRE-MEDMFDRYSRALSFPRRGSQEVMAT-------------------GDWAPRVDIAETDREFTIKAEIPDVRKEDVKVTVDN--GILTIKGERKQEKEEKN------KKYHRVERWYGSFTRSFTLPDNVDESKITAAFKDGMLNLTIPKTEASKPKAIEVQV 145          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: A0A0D2UFN1_CAPO3 (Small HspC2 heat shock protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UFN1_CAPO3)

HSP 1 Score: 99.8 bits (247), Expect = 3.640e-23
Identity = 54/109 (49.54%), Postives = 78/109 (71.56%), Query Frame = 0
Query:   66 LDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQI 174
            +D HE+S+G+ +SADLPGMKK++I+V+ +N  G+LT++GE++QE +EKS+       YH  ERS G+ +R++RLP  AD SKA+A Y DGVL L+  KR   +  RI I
Sbjct:   76 VDVHESSDGYHISADLPGMKKDEISVNCEN--GILTISGEKKQE-QEKSDHT-----YHVFERSVGRVSRTLRLPRDADSSKANAKYTDGVLTLDIAKRALPAGSRIAI 176          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: A0A3C1Z549_9BACT (Heat-shock protein Hsp20 n=2 Tax=Nitrospira TaxID=1234 RepID=A0A3C1Z549_9BACT)

HSP 1 Score: 98.6 bits (244), Expect = 5.200e-23
Identity = 56/136 (41.18%), Postives = 77/136 (56.62%), Query Frame = 0
Query:   52 AIPTVGGKGGLGMNL----------DFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPIG 177
            A P  GG  G G  +          D  ET   + + A+LP +K+ED+ V +  E GVLT+ GER+QE+EEK       +KYH VERSYG+  R+  LPDT D SK  A Y DG+L L+ PK E    ++I++ + 
Sbjct:   24 ANPASGGSVGQGKEVMTVADWTPTVDISETEAEYAIKAELPEVKREDVKVTV--EDGVLTIQGERKQEKEEKG------KKYHRVERSYGRFVRTFTLPDTVDESKVKAEYADGILHLHLPKSEKAKPKQIEVKVA 151          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: UPI0008340C1D (Hsp20/alpha crystallin family protein n=1 Tax=Halofilum ochraceum TaxID=1611323 RepID=UPI0008340C1D)

HSP 1 Score: 99.0 bits (245), Expect = 1.050e-22
Identity = 67/176 (38.07%), Postives = 94/176 (53.41%), Query Frame = 0
Query:    5 RTGSIDPFRHAMHEVFDSMERDLMAPSG--MSSRFPTTDSPGRSISLFSAIPTVGGKGGLGM--NLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPT--SSRRIQI 174
            R G +   R  M+ +FD      +AP+G   +      D  GR    F  +     +GGL      D  ET E +EL  DLPGMKK+D+ VD  +  G+LT++GERR ERE++ +G      Y+  ERSYG   RS R+P++ D    +A + DGVL +  PK E +  +SRRI I
Sbjct:   23 RGGGLSSLRSEMNRLFDRFGGRGVAPAGGRRTGDLAAFDPFGRD--PFELLENALAEGGLESFGRADLSETDEAYELQVDLPGMKKDDVAVDYSD--GILTISGERRDEREDERKG------YYLSERSYGAYRRSFRVPESVDHDSIAARFSDGVLTVKLPKTEESRETSRRIDI 188          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: D8PFX6_9BACT (Heat shock protein, Hsp20 family n=5 Tax=Nitrospira TaxID=1234 RepID=D8PFX6_9BACT)

HSP 1 Score: 97.4 bits (241), Expect = 1.460e-22
Identity = 63/169 (37.28%), Postives = 90/169 (53.25%), Query Frame = 0
Query:   10 DPFRHAMHEVFDSMERDLMAPSGMSSRFPTTDSPGRSI-SLFSAIPTVGGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPIG 177
            DPFR  + E+ D + R +  PS       T    G+ + ++    PTV          D  ET   + + A+LP +KKED+ V +  E  VLT+ GER+QE+E+K       +KYH +ERSYG+  RS  LPD+ D SK  A Y DG+L L+ PK E    ++I + I 
Sbjct:    7 DPFRE-LEEMSDRLNRMIARPST-----GTPAGQGKEVMTVADWTPTV----------DISETESEYAIKAELPEVKKEDVKVTV--EDAVLTIQGERKQEKEDKG------KKYHRIERSYGRFVRSFTLPDSVDESKVRAEYADGILHLHLPKSEKAKPKQIDVKIS 151          
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Match: A0A1W9GA54_9BACT (Heat-shock protein Hsp20 n=1 Tax=Nitrospira sp. SG-bin2 TaxID=1827377 RepID=A0A1W9GA54_9BACT)

HSP 1 Score: 97.1 bits (240), Expect = 1.910e-22
Identity = 62/168 (36.90%), Postives = 89/168 (52.98%), Query Frame = 0
Query:   10 DPFRHAMHEVFDSMERDLMAPSGMSSRFPTTDSPGRSISLFSAIPTVGGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVLTVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASAAYLDGVLKLNFPKREPTSSRRIQIPIG 177
            DPFR  + E+ D + R    P+         +     +++   +PTV          D  E+   + + A+LP +KKED+ V +  E GVLT++GERRQE+EEK       +KYH VERSYG   RS  LP++ D S   A Y DGVL L+ PK E    + I++ +G
Sbjct:    7 DPFRE-LEEMSDRLNRAFARPA-------LRNGGKEHLTVADWVPTV----------DISESEGEYLIKAELPEVKKEDVKVSV--EDGVLTLSGERRQEKEEKG------KKYHRVERSYGSFVRSFSLPESVDESGVKAQYTDGVLNLHLPKTEKVKPKSIEVKVG 148          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67942.14407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B3VMZ8_FUCSE4.060e-9981.46Heat shock protein 20 n=2 Tax=Fucus serratus TaxID... [more]
D7FUU6_ECTSI4.200e-5656.97Small heat shock protein heat shock protein 20 n=1... [more]
A0A6H5KKF0_9PHAE7.190e-4856.21HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5JFM4_9PHAE8.140e-4746.04HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A0S7YIY3_9DELT5.740e-2437.72SHSP domain-containing protein n=1 Tax=Deltaproteo... [more]
A0A0D2UFN1_CAPO33.640e-2349.54Small HspC2 heat shock protein n=1 Tax=Capsaspora ... [more]
A0A3C1Z549_9BACT5.200e-2341.18Heat-shock protein Hsp20 n=2 Tax=Nitrospira TaxID=... [more]
UPI0008340C1D1.050e-2238.07Hsp20/alpha crystallin family protein n=1 Tax=Halo... [more]
D8PFX6_9BACT1.460e-2237.28Heat shock protein, Hsp20 family n=5 Tax=Nitrospir... [more]
A0A1W9GA54_9BACT1.910e-2236.90Heat-shock protein Hsp20 n=1 Tax=Nitrospira sp. SG... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 68..174
e-value: 4.7E-20
score: 71.7
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 57..177
score: 23.406
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 2..176
e-value: 3.0E-33
score: 116.6
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 46..176
IPR031107Small heat shock protein HSP20PANTHERPTHR11527HEAT-SHOCK PROTEIN 20 FAMILY MEMBERcoord: 32..174
NoneNo IPR availablePANTHERPTHR11527:SF175HEAT SHOCK PROTEIN 42coord: 32..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67942contigH-elongata_contig67942:1105..3113 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67942.14407.1mRNA_H-elongata_contig67942.14407.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67942 1105..3221 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67942.14407.1 ID=prot_H-elongata_contig67942.14407.1|Name=mRNA_H-elongata_contig67942.14407.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
MSITRTGSIDPFRHAMHEVFDSMERDLMAPSGMSSRFPTTDSPGRSISLF
SAIPTVGGKGGLGMNLDFHETSEGFELSADLPGMKKEDITVDIDNESGVL
TVTGERRQEREEKSEGDNEQRKYHFVERSYGKTTRSVRLPDTADFSKASA
AYLDGVLKLNFPKREPTSSRRIQIPIGDN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone
IPR031107HSP20