prot_H-elongata_contig67814.14395.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67814.14395.1
Unique Nameprot_H-elongata_contig67814.14395.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length194
Homology
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: D8LGI7_ECTSI (TIP120 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI7_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 1.400e-91
Identity = 148/187 (79.14%), Postives = 163/187 (87.17%), Query Frame = 0
Query:    1 YLPGILNAFVSSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVCDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 187
            YLPGIL+AF  SVKHQYLLLSSLKEVIVCHA T GL+F PYVDQVLPH+F HCTS+EEGVRNMVAECLG LT MHP RL+PEL+KLPG D  +   +WTLATSLKYCMAG APVE LSP+ME FL M++++DLDVKKAALLMVNAAVHHQPFLVSELLP  +IPALY T+ LKLERIVDLGPFKHK 
Sbjct:  835 YLPGILDAFERSVKHQYLLLSSLKEVIVCHANTPGLEFGPYVDQVLPHLFQHCTSDEEGVRNMVAECLGVLTSMHPQRLVPELLKLPG-DKPNPLTLWTLATSLKYCMAGNAPVEELSPHMESFLEMMNNDDLDVKKAALLMVNAAVHHQPFLVSELLPGQIIPALYTTVELKLERIVDLGPFKHKV 1020          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2CRP2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CRP2_9STRA)

HSP 1 Score: 213 bits (541), Expect = 4.220e-64
Identity = 109/191 (57.07%), Postives = 133/191 (69.63%), Query Frame = 0
Query:    1 YLPGILNAFVSSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDV----CDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 187
            YLP IL +  ++ +H YLLLS+LKEVI+ HA T GLDF PY++QVLPH+  HC S EEGVRNMVAECLGAL  MHP  ++P L  L G +         + WT+A+SLKYCM G+AP   L  +M  FL ML+DEDL V+ AAL M NAAVHHQP L+   L   +IP LY+T+ LK ER+VDLGPFK K 
Sbjct:  100 YLPVILESLNAN-RHHYLLLSALKEVILLHANTTGLDFGPYIEQVLPHLLKHCESAEEGVRNMVAECLGALITMHPEVIVPALTNLGGGNEGGAPAGSLMRWTIASSLKYCMTGRAPHAILMEHMANFLEMLNDEDLQVRHAALSMCNAAVHHQPNLIISFLDSKIIPVLYETVRLKQERVVDLGPFKQKV 289          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A836CDP2_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDP2_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.660e-63
Identity = 114/216 (52.78%), Postives = 146/216 (67.59%), Query Frame = 0
Query:    1 YLPGILNAFVSSVKHQYLLLSSLKEVIVCHA-ITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKL----PGYDVCDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIG------------------------LKLERIVDLGPFKHKA 187
            YLP +L+A + S +HQYLLLSSLKEVIVCHA     LDFS  +DQVLPH+F HC S EEGVRNMVA CLGAL  MHP R++P L++      G ++ D    WT+AT+LK+CMAG AP+ ALSP+M  FL +L+D DLDV++ ALL+ NAA+HHQP LV +LL +++ P L +T+G                        LK+ER+VDLGPFKH+ 
Sbjct:  261 YLPVVLDA-LESTRHQYLLLSSLKEVIVCHARARPPLDFSAALDQVLPHLFGHCQSPEEGVRNMVAACLGALATMHPDRVVPALLEALANAGGEELSDALARWTVATALKHCMAGDAPIAALSPHMRTFLALLNDPDLDVRRGALLLANAAIHHQPALVEDLLAEVITPVLLETVGGALVAACRVRFAXXXXXXXXXXVELKMERVVDLGPFKHRV 475          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2UZY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZY3_9STRA)

HSP 1 Score: 202 bits (513), Expect = 5.250e-63
Identity = 105/176 (59.66%), Postives = 131/176 (74.43%), Query Frame = 0
Query:   14 KHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVCDVCLVWTLATSLKYCMAG-KAPVEALSPYMEGFLVMLHD-EDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 187
            + QYLLL++LKEVI+ HA T GLDFS YV+ VLPH++ HC S EEGVRNMVAECLGALT MHP +L+  LVKL   D  ++ L WTL T+LK+C++  +APV  L P+ME F   L D EDL+ ++A LL+  A  HHQP LV +LLP +V+PAL+ TI L LER+VDLGPFKHK 
Sbjct:    5 RQQYLLLAALKEVIMYHACTAGLDFSLYVEMVLPHLYRHCESPEEGVRNMVAECLGALTSMHPEQLVSGLVKLMEDDANNL-LRWTLITALKHCVSHQRAPVSHLLPHMEKFFQALQDSEDLEARRACLLLATACAHHQPSLVCDLLPPLVVPALFATIDLHLERVVDLGPFKHKV 179          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2FNG9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FNG9_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.940e-51
Identity = 100/186 (53.76%), Postives = 122/186 (65.59%), Query Frame = 0
Query:    2 LPGILNAFVSSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVCDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 187
            LP IL     S +H YLLLS+LKEV+V HA T   DF  Y+DQV+PH+  H  S EEGVRNMVAECLGAL  MH   ++P L  L   D     + WT+A+SLKY M G  P   L+ ++  FLVMLHD DL V+ +AL M NAAVHHQP L+S  L   +IP LY+T  L ++R+VDLGPFK K 
Sbjct:  897 LPLILTYMARS-RHHYLLLSALKEVLVLHATTSQ-DFGSYIDQVIPHLLKHGQSPEEGVRNMVAECLGALITMHADSIVPMLSGLGSGDQSSPLMQWTIASSLKYSMVGGVPHAILAQHLPQFLVMLHDADLSVRHSALQMCNAAVHHQPSLISPFLKPTIIPVLYETTRLVVKRVVDLGPFKQKV 1080          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2QZD8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2QZD8_9STRA)

HSP 1 Score: 177 bits (449), Expect = 9.850e-51
Identity = 90/205 (43.90%), Postives = 130/205 (63.41%), Query Frame = 0
Query:    1 YLPGILNAFVS-SVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVC-----------------DVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKA 187
            +LP IL A    S K QYLLLS+L+E+I CH +  G D +  +  +LPH+ THC  +EEGVR MVAECLG+L C+ P  +LP L  L   ++                  D  + WT+A S+K+ +AG+A  E LSP+M  FL +L +++L+VK +ALLMV +AVHH P L++ L+ +++ P LY+   + L+R+VD+GPFKHK 
Sbjct:   53 FLPAILGALEDKSQKDQYLLLSALRELIHCHQLGGGSDIAASIPLILPHLITHCGDKEEGVRTMVAECLGSLVCLQPDVVLPSLQDLVSNNINKSKGSEEKNDNVDGFSHDALICWTVANSIKFAIAGRANTEKLSPFMPKFLELLKEDNLNVKNSALLMVYSAVHHTPQLLAGLMQELISPCLYELAQMNLQRVVDMGPFKHKV 257          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S2XTJ0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTJ0_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.840e-50
Identity = 95/195 (48.72%), Postives = 130/195 (66.67%), Query Frame = 0
Query:    1 YLPGILNAFV-SSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKL---------PGYDVCDVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKH 185
            +LP IL A   +S K QYLLLS+L+E+I CH + DG D S  V ++LPH+  H + +EEGVR M AECLG+L C+HP  + P L  L          G    D  + WT+ATS+K+ +AG+A  + LS YM  FLV+L ++DL VK AALLMV +AVHH P +++ LL + ++P+LY+   L L+R+VDLGPFKH
Sbjct:  691 FLPAILTALEQNSEKKQYLLLSALRELIHCHQLGDGGDISSSVPEILPHLIKHASDKEEGVRTMSAECLGSLACLHPSVVFPTLRDLVVKHGSTSTSGDAEDDALVCWTVATSIKFAIAGRADAKVLSEYMPSFLVLLQNDDLSVKNAALLMVYSAVHHTPAVIAGLLQEHILPSLYELAVLNLKRVVDLGPFKH 885          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7R9VF31_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VF31_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.720e-49
Identity = 95/209 (45.45%), Postives = 132/209 (63.16%), Query Frame = 0
Query:    1 YLPGILNAFVSS-VKHQYLLLSSLKEVIVCHAI------TDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKL----------------PGYDVC-DVCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKH 185
            +LP IL+A   +  K QYLLLS+L+E+I CH +          D SP +  +LPH+F HC  EEEGVR MVAECLG+LTC+ P  +LP+L  L                P  +   D  + WT+AT++K+ +AG+A    LSP+M  FLV+L ++DL VK A LLMV +AVHH P LV+ L+ + ++P+L++   L L+R+VDLGPFKH
Sbjct:  221 FLPAILDALEENREKKQYLLLSALRELIHCHQLGGXXXXXSAADISPSIPLILPHLFKHCADEEEGVRTMVAECLGSLTCLQPAVILPQLKDLVEKHSGKNAPQATEEEPSEEAKKDALVCWTVATAVKFAIAGRADPSQLSPFMPSFLVLLREDDLSVKTAGLLMVYSAVHHSPQLVAGLMQEHILPSLHELAILNLKRVVDLGPFKH 429          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: B8C5W6_THAPS (TIP120 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5W6_THAPS)

HSP 1 Score: 172 bits (436), Expect = 3.400e-46
Identity = 91/187 (48.66%), Postives = 123/187 (65.78%), Query Frame = 0
Query:    1 YLPGILNAFV-SSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVCDVCLV-WTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKH 185
            +LP IL A   SS K QYLLLSSL+E I C+   +G D S  V  +LPH+ T+C ++EEGVR MVAECLG+L C+ P  +LP L KL   D     LV WT+  ++K+ + G+     ++P+M  FL++L ++DL VK  ALLMV +AVHH P LV+ L+   ++P +Y+   L LER VDLGPFKH
Sbjct:  956 FLPSILTALEESSGKKQYLLLSSLREFIHCYREVEGSDLSSSVPLILPHLETNCENDEEGVRTMVAECLGSLACLEPKTILPVLEKLTTKDTKKKVLVRWTVGNAVKFAIGGRISPADIAPFMPTFLLLLQEDDLAVKNVALLMVYSAVHHTPQLVAGLMKDQILPNIYELAQLNLERKVDLGPFKH 1142          
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Match: A0A7S4R363_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R363_9STRA)

HSP 1 Score: 166 bits (420), Expect = 4.700e-44
Identity = 92/202 (45.54%), Postives = 130/202 (64.36%), Query Frame = 0
Query:    1 YLPGILNAFV-SSVKHQYLLLSSLKEVIVCHAI---TDGLDFSPYVDQVLPHMFTHCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLP----GYDVCD---------VCLVWTLATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQPFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKH 185
            +LP ILNA   +S K QYLLLS+L+E+I C+      DG D S  V  +LPH+ +HC+ +EEGVR MVAEC+G+LTC+ P  +LP L +L     G DV D             WT+AT++K+ +A  A    L+ +M  FL +L + DL V+ AALLMV ++VHH P LV+ L+ + ++P+L++   L L+R+VDLGPFKH
Sbjct:  878 FLPAILNALEQNSQKKQYLLLSALRELIHCYQTGGGADGGDISSSVPLILPHLVSHCSDKEEGVRTMVAECMGSLTCLEPGVMLPHLQELVATHGGKDVDDNEEGGGRKDALSCWTVATAIKFAIAAHADPSKLAGFMPSFLRLLSERDLSVRNAALLMVYSSVHHTPQLVAGLMQEHILPSLHELAQLNLKRVVDLGPFKH 1079          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67814.14395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGI7_ECTSI1.400e-9179.14TIP120 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S2CRP2_9STRA4.220e-6457.07Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A836CDP2_9STRA1.660e-6352.78Armadillo-type protein (Fragment) n=1 Tax=Tribonem... [more]
A0A7S2UZY3_9STRA5.250e-6359.66Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2FNG9_9STRA1.940e-5153.76Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2QZD8_9STRA9.850e-5143.90Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2XTJ0_9STRA2.840e-5048.72Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7R9VF31_9STRA2.720e-4945.45Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
B8C5W6_THAPS3.400e-4648.66TIP120 domain-containing protein (Fragment) n=1 Ta... [more]
A0A7S4R363_9STRA4.700e-4445.54Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..187
e-value: 2.2E-50
score: 173.6
IPR039852Cullin-associated NEDD8-dissociated protein 1/2PANTHERPTHR12696TIP120coord: 1..186
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67814contigH-elongata_contig67814:120..2785 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67814.14395.1mRNA_H-elongata_contig67814.14395.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67814 120..2785 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67814.14395.1 ID=prot_H-elongata_contig67814.14395.1|Name=mRNA_H-elongata_contig67814.14395.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
YLPGILNAFVSSVKHQYLLLSSLKEVIVCHAITDGLDFSPYVDQVLPHMF
THCTSEEEGVRNMVAECLGALTCMHPYRLLPELVKLPGYDVCDVCLVWTL
ATSLKYCMAGKAPVEALSPYMEGFLVMLHDEDLDVKKAALLMVNAAVHHQ
PFLVSELLPKMVIPALYQTIGLKLERIVDLGPFKHKALNSTKH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR039852CAND1/CAND2
IPR016024ARM-type_fold