prot_H-elongata_contig678.14393.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig678.14393.1
Unique Nameprot_H-elongata_contig678.14393.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length243
Homology
BLAST of mRNA_H-elongata_contig678.14393.1 vs. uniprot
Match: A0A6H5K9Y6_9PHAE (dTMP kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9Y6_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 3.150e-120
Identity = 172/218 (78.90%), Postives = 188/218 (86.24%), Query Frame = 0
Query:   13 ARRGAFILFEGVDRCGKTTQANLLVENLNQAGRDACLMRFPDRTTPIGQLINAFLQKTADIDDRCVHLLFSANRWEAESKIRERLKAGTTVVCDRYAYSGVAFSASKPGLELGWCKDPDRGLPAPDTVLFLDICVEDAMKRGQFGKERYEKEEFQRTVRATFLSLMEEDKARTAFLVNGVHWKMLDATRSIKSIQDEIIEVATSAIECVKGKEISPLW 230
            A+RGAFILFEGVDRCGKTTQANLLVE+L QAG DAC MRFPDRTTPIGQ+IN FLQ T  IDDRCVHLLFSANRWEAESKIRE LK GTTVVCDRYAYSGVAFSASKPGL + WCKDPDRGLPAPD +LFLDI VEDAMKRGQFG+ERYEKEEFQRTVRATFL+LMEEDKA      +GV W+++DA R I SIQDEI ++ TS +  V+GK+I  LW
Sbjct:   24 AKRGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGQMINGFLQNTTGIDDRCVHLLFSANRWEAESKIRELLKVGTTVVCDRYAYSGVAFSASKPGLSVRWCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRATFLALMEEDKA------SGVAWQLIDANREIGSIQDEIQKIGTSVVGEVEGKDIGSLW 235          
BLAST of mRNA_H-elongata_contig678.14393.1 vs. uniprot
Match: A0A835ZMW1_9STRA (dTMP kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMW1_9STRA)

HSP 1 Score: 268 bits (685), Expect = 1.030e-87
Identity = 134/224 (59.82%), Postives = 161/224 (71.88%), Query Frame = 0
Query:    9 DSRQARRGAFILFEGVDRCGKTTQANLLVENLNQAGRDACLMRFPDRTTPIGQLINAFLQKTADIDDRCVHLLFSANRWEAESKIRERLKAGTTVVCDRYAYSGVAFSASKPGLELGWCKDPDRGLPAPDTVLFLDICVEDAMKRGQFGKERYEKEEFQRTVRATFLSLMEEDKARTAFLVNGVHWKMLDATRSIKSIQDEIIEVATSAIECVK--GKEISPLW 230
            DS   +RGAFILFEGVDRCGKTTQ   LV+ L + G DA  MRFPDRTT IGQ+INA+LQ TA++DD+C+HLLFSANRWEA S I  RL AG T+VCDRYAYSGVAFSA+KPGL + WCK PD+GLPAPD V++LD+ VE AM+RGQFG+ERYEK +FQR VR  F++L E D         G  W ++DA  S   +   +   A  AI  VK  G++I  LW
Sbjct:   12 DSNGPQRGAFILFEGVDRCGKTTQCERLVKRLKEDGHDAVHMRFPDRTTAIGQMINAYLQSTAEMDDQCIHLLFSANRWEALSTIERRLAAGLTIVCDRYAYSGVAFSAAKPGLTVDWCKAPDKGLPAPDVVIYLDLAVEAAMERGQFGEERYEKADFQRRVRDNFMALREAD---------GERWAVVDAAASRDEVAAAVHAAAAKAIADVKEEGRQIQKLW 226          
BLAST of mRNA_H-elongata_contig678.14393.1 vs. uniprot
Match: A0A7S2H363_9STRA (dTMP kinase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H363_9STRA)

HSP 1 Score: 249 bits (635), Expect = 1.530e-79
Identity = 126/235 (53.62%), Postives = 156/235 (66.38%), Query Frame = 0
Query:   15 RGAFILFEGVDRCGKTTQANLLVENLNQAGRDA--------------CLMRFPDRTTPIGQLINAFLQKTADIDDRCVHLLFSANRWEAESKIRERLKAGTTVVCDRYAYSGVAFSASKPGLELGWCKDPDRGLPAPDTVLFLDICVEDAMKRGQFGKERYEKEEFQRTVRATFLSLMEEDKARTAFLVNGVHWKMLDATRSIKSIQDEIIEVATSAIECVKGKEISPLWPALPE 235
            RGAFIL EGVDRCGKTTQ  +L + L+ A   A               LMRFPDRTT IGQ+IN +L    D+DDR +HLLFSANRWEA +KI + L+AGTT+VCDRYAYSGVAFS +K GL + WC  PDRGLP PD V++LD+ VEDAM+RG FG+ERYEKEEFQR V   F ++M  D            W ++DAT+SI  +Q EI+ +A +     +GK I+ LW   P+
Sbjct:   44 RGAFILLEGVDRCGKTTQTKMLADTLSAARHAAPSGAIDDQNMPPRATLMRFPDRTTTIGQMINGYLANGVDMDDRAIHLLFSANRWEARAKIEDTLRAGTTIVCDRYAYSGVAFSGAKEGLSVEWCMAPDRGLPCPDCVIYLDLSVEDAMQRGAFGEERYEKEEFQRRVSDNFKAIMASD---------STPWHVVDATKSIAEMQAEILAIAEATQRQCRGKPITGLWVDNPQ 269          
BLAST of mRNA_H-elongata_contig678.14393.1 vs. uniprot
Match: A0A1Z5K5E1_FISSO (dTMP kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5E1_FISSO)

HSP 1 Score: 240 bits (613), Expect = 1.030e-76
Identity = 118/216 (54.63%), Postives = 156/216 (72.22%), Query Frame = 0
Query:   15 RGAFILFEGVDRCGKTTQANLLVENLNQAGRDACLMRFPDRTTPIGQLINAFLQKTADIDDRCVHLLFSANRWEAESKIRERLKAGTTVVCDRYAYSGVAFSASKPGLELGWCKDPDRGLPAPDTVLFLDICVEDAMKRGQFGKERYEKEEFQRTVRATFLSLMEEDKARTAFLVNGVHWKMLDATRSIKSIQDEIIEVATSAIECVKGKEISPLW 230
            RGAF L EGVDRCGKTTQ   L++ L QAG  A  MRFP+RTT  GQLI+++LQ+T+++DDR +HLLFSANRWE+   I E+LKAGT++VCDRYAYSGVAFSASK  ++L WC+ PDRGLPAPD V+FLD+  E A +RG +G+ERYEK E Q+ VR  F  L + D        +GV WK ++A +++  ++D+I  +A   +E V+  E+  LW
Sbjct:   11 RGAFFLLEGVDRCGKTTQCQRLLQRLLQAGIAATAMRFPNRTTSTGQLIDSYLQQTSNMDDRAIHLLFSANRWESADMIVEQLKAGTSIVCDRYAYSGVAFSASKDNMDLEWCQAPDRGLPAPDCVIFLDMSTEQAEERGGYGQERYEKREMQQRVRQRFQELSQLD--------DGVQWKFVNAAQTMDQVEDDIWSIAQQTLEQVQ-PEVRQLW 217          
BLAST of mRNA_H-elongata_contig678.14393.1 vs. uniprot
Match: A0A0F8ANZ3_LARCR (dTMP kinase n=2 Tax=Sciaenidae TaxID=30870 RepID=A0A0F8ANZ3_LARCR)

HSP 1 Score: 228 bits (582), Expect = 2.590e-72
Identity = 107/217 (49.31%), Postives = 154/217 (70.97%), Query Frame = 0
Query:   14 RRGAFILFEGVDRCGKTTQANLLVENLNQAGRDACLMRFPDRTTPIGQLINAFLQKTADIDDRCVHLLFSANRWEAESKIRERLKAGTTVVCDRYAYSGVAFSASKPGLELGWCKDPDRGLPAPDTVLFLDICVEDAMKRGQFGKERYEKEEFQRTVRATFLSLMEEDKARTAFLVNGVHWKMLDATRSIKSIQDEIIEVATSAIECVKGKEISPLW 230
            +RGA I+ EGVDR GKTTQ   L E L ++G+ A +MRFPDRTT IG+LI+A+L+  +D++D  VHLLFSANRWE    ++++L+ GTT+V DRYA+SGVAF+++KPG  L WCK PD GLP PD V+FL +   +A  RGQFG+ERYEK +FQR V+  F  LM++           VHW+++DA++S++ +  +I+  + +AI C + + ++ LW
Sbjct:    4 KRGALIVLEGVDRAGKTTQCKKLFEALQRSGKPAEMMRFPDRTTTIGKLISAYLENKSDLEDHTVHLLFSANRWEMVPLMKKKLEQGTTLVVDRYAFSGVAFTSAKPGFCLDWCKSPDVGLPQPDLVMFLQLSPSEAALRGQFGEERYEKSDFQRAVQNKFQQLMKD---------RSVHWQVIDASQSVEDVHKDIMTHSLNAINCAQNQALAELW 211          
BLAST of mRNA_H-elongata_contig678.14393.1 vs. uniprot
Match: A0A7S2L3C4_9STRA (dTMP kinase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L3C4_9STRA)

HSP 1 Score: 229 bits (585), Expect = 4.410e-72
Identity = 116/229 (50.66%), Postives = 156/229 (68.12%), Query Frame = 0
Query:   10 SRQARRGAFILFEGVDRCGKTTQANLLVENLNQAGRDACLMRFPDRTTPIGQLINAFLQKTADIDDRCVHLLFSANRWEAESKIRERLKAGTTVVCDRYAYSGVAFSASKP-------GLELGWCKDPDRGLPAPDTVLFLDICVEDAMKRGQFGKERYEKEEFQRTVRATFLSLMEEDKARTAFLVNGVHWKMLDATRSIKSIQDEIIEVATSAIECVK-GKEISPLW 230
            S  A+RGAFIL EGVDRCGKTTQ  LL+++L   G  A  MRFPDRTT +GQLIN +L +T +++DR VHLLFSANRWEA + + + L  GTT+VCDRYAYSGVAFS++K         L + WCK  D GLPAPD V+FLD+  E+A KRG +G ERYEK+E Q  VR  F  L ++D+A        V WK++DA++S++ +Q +I ++    ++ V  G ++  +W
Sbjct:   11 SAPAKRGAFILLEGVDRCGKTTQCGLLLQHLLALGITALAMRFPDRTTMVGQLINGYLSQTREMEDRAVHLLFSANRWEASNSLAQHLANGTTIVCDRYAYSGVAFSSAKSYPDARHKELSIDWCKACDIGLPAPDVVIFLDLTQEEAQKRGGYGGERYEKKEMQMRVRQRFDELQKDDEAS-----GRVPWKVVDASQSVEDVQRDINQIVEETLQRVNAGADLKKMW 234          
BLAST of mRNA_H-elongata_contig678.14393.1 vs. uniprot
Match: A0A6P7M9N3_BETSP (dTMP kinase n=5 Tax=Percomorphaceae TaxID=1489872 RepID=A0A6P7M9N3_BETSP)

HSP 1 Score: 227 bits (578), Expect = 1.120e-71
Identity = 111/219 (50.68%), Postives = 152/219 (69.41%), Query Frame = 0
Query:   14 RRGAFILFEGVDRCGKTTQANLLVENLNQAGRDACLMRFPDRTTPIGQLINAFLQKTADIDDRCVHLLFSANRWEAESKIRERLKAGTTVVCDRYAYSGVAFSASKPGLELGWCKDPDRGLPAPDTVLFLDICVEDAMKRGQFGKERYEKEEFQRTVRATFLSLMEEDKARTAFLVNGVHWKMLDATRSIKSIQDEIIEVATSAIECVKGKEISPLWPA 232
            +RGA I+ EGVDR GKTTQ N LV++L Q+GR   +MRFPDRTT IGQLINA+L+K +D++D  VHLLFSANRWE    I+++L+ GTT+V DRYA+SGVAF+++KPG  L WCK PD GLP PD V+FL +   +A  RGQFG+ERYE   FQR V+  F  LM++           V+W+++DA++S++ +  +I   + +AI   +   +  LW A
Sbjct:    4 KRGALIVLEGVDRAGKTTQCNKLVQSLQQSGRAVEMMRFPDRTTIIGQLINAYLEKKSDLEDHTVHLLFSANRWELVPLIKKKLEQGTTLVVDRYAFSGVAFTSAKPGFSLDWCKKPDVGLPKPDLVMFLQLSPAEAALRGQFGEERYETSAFQRAVQQKFEHLMKD---------LSVNWQVIDASQSVEDVHKQIAYHSLNAINTAQNLPLGELWKA 213          
BLAST of mRNA_H-elongata_contig678.14393.1 vs. uniprot
Match: A0A7S3H922_9STRA (dTMP kinase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H922_9STRA)

HSP 1 Score: 228 bits (580), Expect = 1.380e-71
Identity = 112/218 (51.38%), Postives = 154/218 (70.64%), Query Frame = 0
Query:   13 ARRGAFILFEGVDRCGKTTQANLLVENLNQAGRDACLMRFPDRTTPIGQLINAFLQKTADIDDRCVHLLFSANRWEAESKIRERLKAGTTVVCDRYAYSGVAFSASKPGLELGWCKDPDRGLPAPDTVLFLDICVEDAMKRGQFGKERYEKEEFQRTVRATFLSLMEEDKARTAFLVNGVHWKMLDATRSIKSIQDEIIEVATSAIECVKGKEISPLW 230
            A RGAFILFEGVDRCGKTTQ  +L + L ++ R+   +RFP+R + IGQLI+++LQ T++++D+ +HLLFSANRWE    I  +L  G T++CDRYAYSGVAF+++K GL+L WCK  DRGLPAPD +++LDI VEDA KRG FG+ERYEK +FQ+ VR  F+ L  ED+A  A     V W +++A +SI  +  EI  +  + +  +  K +  LW
Sbjct:   32 ASRGAFILFEGVDRCGKTTQVGMLKDYLTKS-RETEQIRFPERKSTIGQLIDSYLQSTSNMNDQSIHLLFSANRWEQSDSIESKLANGNTLICDRYAYSGVAFTSAK-GLDLDWCKSCDRGLPAPDCIIYLDIPVEDAAKRGNFGEERYEKIDFQKKVREQFMLLQSEDQASAA-----VPWHVVNAAQSIDEVHSEIKNIVDNVLASLDDKPVGKLW 242          
BLAST of mRNA_H-elongata_contig678.14393.1 vs. uniprot
Match: W5MHK0_LEPOC (dTMP kinase n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MHK0_LEPOC)

HSP 1 Score: 226 bits (577), Expect = 2.420e-71
Identity = 110/217 (50.69%), Postives = 152/217 (70.05%), Query Frame = 0
Query:   14 RRGAFILFEGVDRCGKTTQANLLVENLNQAGRDACLMRFPDRTTPIGQLINAFLQKTADIDDRCVHLLFSANRWEAESKIRERLKAGTTVVCDRYAYSGVAFSASKPGLELGWCKDPDRGLPAPDTVLFLDICVEDAMKRGQFGKERYEKEEFQRTVRATFLSLMEEDKARTAFLVNGVHWKMLDATRSIKSIQDEIIEVATSAIECVKGKEISPLW 230
            RRGAFI+ EGVDR GKTTQ   LV+ L ++G  A +MRFPDRTT IGQLI+A+L+K +D++D  VHLLFSANRWE    +R++L+ G ++V DRYA+SGVAF+++KPG  L WCK PD GLP PD VLFL +  E+A +RG++G ERYE  +FQR V+  F  LM++           ++WK++DA +SI+ +  EI   + +AI+    + I+ LW
Sbjct:    4 RRGAFIVLEGVDRAGKTTQCKKLVQALQESGHRAEIMRFPDRTTKIGQLISAYLEKKSDLEDHTVHLLFSANRWELVPAMRQKLEQGVSLVVDRYAFSGVAFTSAKPGFCLDWCKKPDVGLPKPDLVLFLQLSPEEAARRGEYGAERYESSDFQRNVQQRFQQLMKDP---------SLNWKVIDAAQSIEDLHTEIKTHSEAAIKAATNQPITELW 211          
BLAST of mRNA_H-elongata_contig678.14393.1 vs. uniprot
Match: L1JWU7_GUITC (dTMP kinase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JWU7_GUITC)

HSP 1 Score: 226 bits (575), Expect = 2.980e-71
Identity = 111/216 (51.39%), Postives = 147/216 (68.06%), Query Frame = 0
Query:   15 RGAFILFEGVDRCGKTTQANLLVENLNQAGRDACLMRFPDRTTPIGQLINAFLQKTADIDDRCVHLLFSANRWEAESKIRERLKAGTTVVCDRYAYSGVAFSASKPGLELGWCKDPDRGLPAPDTVLFLDICVEDAMKRGQFGKERYEKEEFQRTVRATFLSLMEEDKARTAFLVNGVHWKMLDATRSIKSIQDEIIEVATSAIECVKGKEISPLW 230
            RGA I+ EG+DR GK+TQ   LVE L   G+ A  M FPDRTT +G LIN +LQ   D+DD  +HLLFSANRWEA   IR+RL +G T++ DRYAYSGVAFSA+K  L++ WCK PDRGLPAPD V++LD+  + A +RG +G+ERYEKEEFQ+ VR  F +LM ++ A          W+ +DA +++  + +EI  +AT  ++ V  K I  LW
Sbjct:    4 RGALIVLEGLDRSGKSTQVIRLVEKLVSMGKKASKMNFPDRTTTVGGLINEYLQSGKDLDDAVIHLLFSANRWEATRSIRDRLSSGETLIVDRYAYSGVAFSAAKGTLDIEWCKGPDRGLPAPDCVIYLDVSSDVAKQRGGYGEERYEKEEFQKKVRTCFEALMSQEPAM---------WRRVDANKTMDEVTEEIEGIATKIVDQVTDKPIGSLW 210          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig678.14393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9Y6_9PHAE3.150e-12078.90dTMP kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A835ZMW1_9STRA1.030e-8759.82dTMP kinase n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7S2H363_9STRA1.530e-7953.62dTMP kinase n=1 Tax=Dictyocha speculum TaxID=35687... [more]
A0A1Z5K5E1_FISSO1.030e-7654.63dTMP kinase n=2 Tax=Fistulifera solaris TaxID=1519... [more]
A0A0F8ANZ3_LARCR2.590e-7249.31dTMP kinase n=2 Tax=Sciaenidae TaxID=30870 RepID=A... [more]
A0A7S2L3C4_9STRA4.410e-7250.66dTMP kinase n=1 Tax=Leptocylindrus danicus TaxID=1... [more]
A0A6P7M9N3_BETSP1.120e-7150.68dTMP kinase n=5 Tax=Percomorphaceae TaxID=1489872 ... [more]
A0A7S3H922_9STRA1.380e-7151.38dTMP kinase (Fragment) n=1 Tax=Spumella elongata T... [more]
W5MHK0_LEPOC2.420e-7150.69dTMP kinase n=2 Tax=Lepisosteus oculatus TaxID=791... [more]
L1JWU7_GUITC2.980e-7151.39dTMP kinase n=2 Tax=Guillardia theta TaxID=55529 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039430Thymidylate kinase-like domainPFAMPF02223Thymidylate_kincoord: 21..210
e-value: 4.8E-46
score: 156.8
NoneNo IPR availableGENE3D3.40.50.300coord: 9..231
e-value: 2.8E-69
score: 234.9
NoneNo IPR availablePANTHERPTHR10344THYMIDYLATE KINASEcoord: 11..230
NoneNo IPR availablePANTHERPTHR10344:SF1THYMIDYLATE KINASEcoord: 11..230
IPR018094Thymidylate kinaseTIGRFAMTIGR00041TIGR00041coord: 15..210
e-value: 2.8E-40
score: 136.1
IPR018094Thymidylate kinaseHAMAPMF_00165Thymidylate_kinasecoord: 17..218
score: 17.472
IPR018095Thymidylate kinase, conserved sitePROSITEPS01331THYMIDYLATE_KINASEcoord: 104..116
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig678contigH-elongata_contig678:13712..18492 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig678.14393.1mRNA_H-elongata_contig678.14393.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig678 13521..19442 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig678.14393.1 ID=prot_H-elongata_contig678.14393.1|Name=mRNA_H-elongata_contig678.14393.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=243bp
MVDHVGGDDSRQARRGAFILFEGVDRCGKTTQANLLVENLNQAGRDACLM
RFPDRTTPIGQLINAFLQKTADIDDRCVHLLFSANRWEAESKIRERLKAG
TTVVCDRYAYSGVAFSASKPGLELGWCKDPDRGLPAPDTVLFLDICVEDA
MKRGQFGKERYEKEEFQRTVRATFLSLMEEDKARTAFLVNGVHWKMLDAT
RSIKSIQDEIIEVATSAIECVKGKEISPLWPALPEKGLVESD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039430Thymidylate_kin-like_dom
IPR018094Thymidylate_kinase
IPR018095Thymidylate_kin_CS
IPR027417P-loop_NTPase