prot_H-elongata_contig67783.14386.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67783.14386.1
Unique Nameprot_H-elongata_contig67783.14386.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length296
Homology
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BLAST of mRNA_H-elongata_contig67783.14386.1 vs. uniprot
Match: D8LG39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG39_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 5.170e-21
Identity = 164/294 (55.78%), Postives = 178/294 (60.54%), Query Frame = 0 
Query:   11 RGVWDEAGSGDLEALAAALAPGGDGDVNACAVDGWTALHAAAHVGHAAAV-SLLVRSGASTAARAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLPPDAWGRNAAAVARQLNRTGPLRLLEATTSTDIGRKRAANGXXXXXXXXXXXXXVKGMGPCNGEEEEDGAHHECDSISNADG----GVGSRYVRRWPPVGDGGXXX-----GSRWVVMNESGRMLERASGKVS 294
            RG+WDEA +GDL ALAAAL PGG+GDV+AC  DGWTALH+AAH GH  AV SLLV SGAS A+ A+                                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  PPDAWGR+ AAVARQL+R GPL+LLEA              XXXXXXXXXXXXX                                GV      R   +G+GG        G+RWVVMNESGRMLER SGKV+
Sbjct:   96 RGLWDEAAAGDLAALAAALTPGGEGDVHACNGDGWTALHSAAHAGHGLAVISLLVGSGASPASVARRGYTPLHSACMRGRWHSAAALLALGADANVRADDQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHFPPDAWGRDPAAVARQLDRAGPLKLLEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVDDEEAER--VIGEGGQKGATAVVGNRWVVMNESGRMLERRSGKVA 387
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67783.14386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LG39_ECTSI5.170e-2155.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 44..59
score: 42.45
coord: 92..106
score: 38.89
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 109..138
e-value: 5.0E-6
score: 36.0
coord: 142..171
e-value: 0.058
score: 22.5
coord: 76..105
e-value: 3.5E-5
score: 33.2
coord: 43..72
e-value: 0.0046
score: 26.2
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 43..73
e-value: 3.8E-5
score: 23.9
IPR002110Ankyrin repeatPFAMPF13606Ank_3coord: 144..169
e-value: 0.0039
score: 17.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 109..141
score: 13.01
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 142..174
score: 10.873
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 43..75
score: 11.514
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 76..108
score: 12.075
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 75..140
e-value: 7.0E-14
score: 52.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 43..195
score: 43.29
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 114..203
e-value: 7.0E-22
score: 79.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 12..113
e-value: 4.5E-28
score: 99.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 34..195
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 84..169
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 84..169
coord: 15..125
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 15..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67783contigH-elongata_contig67783:68..2346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67783.14386.1mRNA_H-elongata_contig67783.14386.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67783 68..2346 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67783.14386.1 ID=prot_H-elongata_contig67783.14386.1|Name=mRNA_H-elongata_contig67783.14386.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=296bp
GGNPVGRTGVRGVWDEAGSGDLEALAAALAPGGDGDVNACAVDGWTALHA
AAHVGHAAAVSLLVRSGASTAARAKRGWTPLHSACMRGRSQAVRALLSAR
ADVNARAVDQRTPLHFACEAGSPECTKELLRAGASVNVSDQDARTPLHFA
CIDGSTECVRRLLAAGASPLPPDAWGRNAAAVARQLNRTGPLRLLEATTS
TDIGRKRAANGGASEGSSSPPPPPVKGMGPCNGEEEEDGAHHECDSISNA
DGGVGSRYVRRWPPVGDGGGGGGSRWVVMNESGRMLERASGKVSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf