prot_H-elongata_contig67716.14383.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67716.14383.1
Unique Nameprot_H-elongata_contig67716.14383.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length56
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67716.14383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1..56
e-value: 1.3E-9
score: 40.2
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 8..40
e-value: 3.2E-6
score: 27.4
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1..53
score: 11.708
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 6..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67716contigH-elongata_contig67716:51..218 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67716.14383.1mRNA_H-elongata_contig67716.14383.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67716 51..218 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67716.14383.1 ID=prot_H-elongata_contig67716.14383.1|Name=mRNA_H-elongata_contig67716.14383.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp
FVQTSYGRTKRCHIFRGLYRGQPYSFQVRAVNNEGTGPWSEASESAWTLT
ERPAPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR003961FN3_dom
IPR036116FN3_sf