prot_H-elongata_contig67711.14381.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67711.14381.1
Unique Nameprot_H-elongata_contig67711.14381.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
BLAST of mRNA_H-elongata_contig67711.14381.1 vs. uniprot
Match: D8LLE4_ECTSI (PRLI-interacting factor L-like (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE4_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 8.010e-30
Identity = 54/81 (66.67%), Postives = 66/81 (81.48%), Query Frame = 0
Query:    1 MRDFMKENSKDLFRQKGVLAFKDQPQKFVFQQGVHDQVTCEPSSNEWAADGSDRESKIVFIGLRLDKEYITEKIKGCLVPE 81
            M +F++ENS +LFR KGVLAFKDQ +KFVFQ GVH+Q+ CEP+ N WA +G +R SKIVFIGL LDK+YITE  K C+VPE
Sbjct:    6 MAEFLRENSANLFRSKGVLAFKDQERKFVFQ-GVHEQIDCEPAINGWA-EGEERVSKIVFIGLDLDKDYITESFKACIVPE 84          
BLAST of mRNA_H-elongata_contig67711.14381.1 vs. uniprot
Match: A0A6H5K110_9PHAE (CobW C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K110_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.830e-26
Identity = 53/81 (65.43%), Postives = 67/81 (82.72%), Query Frame = 0
Query:    1 MRDFMKENSKDLFRQKGVLAFKDQPQKFVFQQGVHDQVTCEPSSNEWAADGSDRESKIVFIGLRLDKEYITEKIKGCLVPE 81
            M +F++ENS +LFR KGVLAFKDQ +K+VFQ GVH+Q+ CEP+ N WA +G +RESKIVFIGL LD +YITE +K C+VPE
Sbjct:  419 MGEFLRENSANLFRSKGVLAFKDQERKYVFQ-GVHEQIDCEPAINGWA-EGEERESKIVFIGLDLDNDYITESLKACIVPE 497          
BLAST of mRNA_H-elongata_contig67711.14381.1 vs. uniprot
Match: A0A7S3JV87_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JV87_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.370e-11
Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0
Query:    1 MRDFMKENSKDLFRQKGVLAFKDQPQ-KFVFQQGVHDQVTCEPSSNEWAADGSDRESKIVFIGLRLDKEYITEKIKGCLVPED 82
            M + ++  + DL+R KGVL+F  Q   KFVFQ GVH+Q+   P+ + W  +   R SKIVFIG  LD++++ E I+ CLV  D
Sbjct:  267 MAELLQTRAADLYRTKGVLSFAGQGDTKFVFQ-GVHEQINFGPAQSPWQPN-EPRVSKIVFIGRNLDRKFLNESIRACLVSSD 347          
BLAST of mRNA_H-elongata_contig67711.14381.1 vs. uniprot
Match: A0A6U2FXS0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2FXS0_HEMAN)

HSP 1 Score: 62.0 bits (149), Expect = 2.280e-10
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 0
Query:    1 MRDFMKENSKDLFRQKGVLAFKDQPQKFVFQQGVHDQVTCEPSSNEWAADGSDRESKIVFIGLRLDKEYITEKIKGC 77
            M   ++  + DL+R KGVL FK    KFVF  GVH+Q+   PS   WA  G     K+VFIG +LD+ ++T+ I GC
Sbjct:   55 MTSLLQTRANDLYRCKGVLKFKGNDDKFVFH-GVHEQIEFGPSEVGWAQ-GEKIMVKMVFIGRKLDRAFLTDGITGC 129          
BLAST of mRNA_H-elongata_contig67711.14381.1 vs. uniprot
Match: A0A7S0VMP5_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VMP5_9CRYP)

HSP 1 Score: 62.4 bits (150), Expect = 1.770e-9
Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 0
Query:    1 MRDFMKENSKDLFRQKGVLAFKDQPQKFVFQQGVHDQVTCEPSSNEWAADGSDRESKIVFIGLRLDKEYITEKIKGC 77
            M + ++  + DL+R KGVL FK    KFVF  GVH+Q+   PS   WA  G     K+VFIG +LD+ ++T+ I GC
Sbjct:  445 MTNLLQTRANDLYRCKGVLKFKGNDDKFVFH-GVHEQIEFGPSEVGWAQ-GEKIMVKMVFIGRKLDRAFLTDGITGC 519          
BLAST of mRNA_H-elongata_contig67711.14381.1 vs. uniprot
Match: A0A0K2D9W3_9HYPH (Cobalamin biosynthesis protein CobW n=6 Tax=Proteobacteria TaxID=1224 RepID=A0A0K2D9W3_9HYPH)

HSP 1 Score: 61.6 bits (148), Expect = 3.010e-9
Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 0
Query:    3 DFMKENSKDLFRQKGVLAFKDQPQKFVFQQGVHDQVTCEPSSNEWAADGSDRESKIVFIGLRLDKEYITEKIKGC 77
            D ++    ++ R KG+LAF+D+P++FVFQ GVH  +       EW   G +R SKIVFIG  LDKE I E    C
Sbjct:  276 DLVQREGPNILRSKGILAFRDEPRRFVFQ-GVH-MILDGDLQREWKP-GEERRSKIVFIGRNLDKEAIREGFLAC 347          
BLAST of mRNA_H-elongata_contig67711.14381.1 vs. uniprot
Match: A0A525IJW3_BRASZ (GTP-binding protein n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A525IJW3_BRASZ)

HSP 1 Score: 59.3 bits (142), Expect = 1.990e-8
Identity = 34/71 (47.89%), Postives = 43/71 (60.56%), Query Frame = 0
Query:    7 ENSKDLFRQKGVLAFKDQPQKFVFQQGVHDQVTCEPSSNEWAADGSDRESKIVFIGLRLDKEYITEKIKGC 77
            E   D+ R KG++AFK  P++FVFQ GVH  +  EP   EW A G  RESK+VFIG  LD+  I   +  C
Sbjct:  278 ERGPDILRCKGIVAFKGDPKRFVFQ-GVHMMLDGEPQ-REWKA-GETRESKVVFIGRNLDEATIRAGLLAC 345          
BLAST of mRNA_H-elongata_contig67711.14381.1 vs. uniprot
Match: A0A6M5YHV0_9BACT (Metal chaperone, involved in Zn homeostasis n=1 Tax=Frigoriglobus tundricola TaxID=2774151 RepID=A0A6M5YHV0_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 3.830e-8
Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    1 MRDFMKENSKDLFRQKGVLAFKDQPQKFVFQQGVHDQVTCEPSSNEWAADGSDRESKIVFIGLRLDKEYITEKIKGCL 78
            M + ++    D+FR KGVL+ K++P +FVFQ GVH  +        W    + R +K+VFIG +LD+E +TE  K CL
Sbjct:  292 MSELLQSKGPDIFRMKGVLSIKNEPNRFVFQ-GVH-MLFDGKLDKPWGK--TPRSNKLVFIGRKLDREALTEGFKSCL 365          
BLAST of mRNA_H-elongata_contig67711.14381.1 vs. uniprot
Match: A0A2P5NTA2_9HYPH (Cobalamin biosynthesis protein CobW n=1 Tax=Methylocystis sp. TaxID=1911079 RepID=A0A2P5NTA2_9HYPH)

HSP 1 Score: 58.5 bits (140), Expect = 3.840e-8
Identity = 31/73 (42.47%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    1 MRDFMKENSKDLFRQKGVLAFKDQPQKFVFQQGVHDQVTCEPSSNEWAADGSDRESKIVFIGLRLDKEYITEK 73
            + +F++    D+ R KG++AFK++P++FVFQ GVH Q+       EW  DG  RES++VFIG +L +E I ++
Sbjct:  293 LNEFIQREGPDILRSKGIVAFKNEPRRFVFQ-GVH-QILDGDLQREWK-DGEKRESRLVFIGRKLKEEEIRKE 362          
BLAST of mRNA_H-elongata_contig67711.14381.1 vs. uniprot
Match: A0A1E3H3P8_9HYPH (Putative GTP-binding protein YjiA n=1 Tax=Methylobrevis pamukkalensis TaxID=1439726 RepID=A0A1E3H3P8_9HYPH)

HSP 1 Score: 56.6 bits (135), Expect = 6.780e-8
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 0
Query:   11 DLFRQKGVLAFKDQPQKFVFQQGVHDQVTCEPSSNEWAADGSDRESKIVFIGLRLDKEYITEKIKGCLV 79
            ++ R KG++AFKD+PQ++V Q GVH  +       +W  DG  RES++VFIG  LDK  + +    CLV
Sbjct:  119 NILRLKGIMAFKDEPQRYVLQ-GVH-MIVEGDLQRDWR-DGEPRESRLVFIGRHLDKAALEKSFAECLV 184          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67711.14381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLE4_ECTSI8.010e-3066.67PRLI-interacting factor L-like (ISS) n=1 Tax=Ectoc... [more]
A0A6H5K110_9PHAE1.830e-2665.43CobW C-terminal domain-containing protein n=1 Tax=... [more]
A0A7S3JV87_9STRA1.370e-1144.58Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6U2FXS0_HEMAN2.280e-1044.16Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0VMP5_9CRYP1.770e-944.16Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A0K2D9W3_9HYPH3.010e-945.33Cobalamin biosynthesis protein CobW n=6 Tax=Proteo... [more]
A0A525IJW3_BRASZ1.990e-847.89GTP-binding protein n=1 Tax=Bradyrhizobium sp. Tax... [more]
A0A6M5YHV0_9BACT3.830e-841.03Metal chaperone, involved in Zn homeostasis n=1 Ta... [more]
A0A2P5NTA2_9HYPH3.840e-842.47Cobalamin biosynthesis protein CobW n=1 Tax=Methyl... [more]
A0A1E3H3P8_9HYPH6.780e-843.48Putative GTP-binding protein YjiA n=1 Tax=Methylob... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036627CobW-like, C-terminal domain superfamilyGENE3D3.30.1220.10coord: 1..78
e-value: 3.7E-19
score: 70.4
IPR011629Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminalPFAMPF07683CobW_Ccoord: 3..78
e-value: 9.0E-17
score: 60.8
NoneNo IPR availablePANTHERPTHR13748COBW-RELATEDcoord: 1..78
NoneNo IPR availablePANTHERPTHR13748:SF61coord: 1..78
NoneNo IPR availableSUPERFAMILY90002Hypothetical protein YjiA, C-terminal domaincoord: 4..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67711contigH-elongata_contig67711:1176..1662 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67711.14381.1mRNA_H-elongata_contig67711.14381.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67711 1164..1662 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67711.14381.1 ID=prot_H-elongata_contig67711.14381.1|Name=mRNA_H-elongata_contig67711.14381.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
MRDFMKENSKDLFRQKGVLAFKDQPQKFVFQQGVHDQVTCEPSSNEWAAD
GSDRESKIVFIGLRLDKEYITEKIKGCLVPED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036627CobW-likC_sf
IPR011629Cbl_biosynth_CobW-like_C