prot_H-elongata_contig67693.14377.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67693.14377.1
Unique Nameprot_H-elongata_contig67693.14377.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length251
Homology
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BLAST of mRNA_H-elongata_contig67693.14377.1 vs. uniprot
Match: D8LJW6_ECTSI (Inversin protein alternative isoform n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW6_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 4.770e-5
Identity = 27/44 (61.36%), Postives = 33/44 (75.00%), Query Frame = 0 
Query:    1 YGETSHTQVANLLLGAGADVEFTTDQLFTPLLIASFNGNLRLAK 44
            + E  H + A +LL AGA++E TTDQLFTPLLIA FNG L L+K
Sbjct:  129 FEECGHMKAARVLLKAGANLESTTDQLFTPLLIAVFNGKLGLSK 172
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67693.14377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJW6_ECTSI4.770e-561.36Inversin protein alternative isoform n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 191..220
e-value: 0.0048
score: 26.1
coord: 26..55
e-value: 0.056
score: 22.6
coord: 125..154
e-value: 6.1
score: 15.8
coord: 92..121
e-value: 2.7
score: 17.0
coord: 59..88
e-value: 0.24
score: 20.5
coord: 158..187
e-value: 0.0028
score: 26.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 92..124
score: 10.846
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 125..157
score: 8.95
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 191..223
score: 11.701
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 26..58
score: 10.579
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 59..91
score: 9.377
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 158..190
score: 9.591
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 7..89
e-value: 1.5E-8
score: 35.1
coord: 130..220
e-value: 4.5E-13
score: 49.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..243
score: 62.181
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 158..243
e-value: 1.2E-24
score: 88.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..157
e-value: 2.0E-38
score: 133.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 6..242
NoneNo IPR availablePIRSFPIRSF000654ILKcoord: 64..163
e-value: 1.2E-11
score: 41.8
coord: 2..67
e-value: 4.1E-6
score: 23.6
coord: 156..244
e-value: 7.9E-14
score: 49.0
NoneNo IPR availablePANTHERPTHR23206:SF4ANKYRIN REPEAT AND KH DOMAIN-CONTAINING 1coord: 67..240
NoneNo IPR availablePANTHERPTHR23206MASK PROTEINcoord: 4..184
NoneNo IPR availablePANTHERPTHR23206:SF4ANKYRIN REPEAT AND KH DOMAIN-CONTAINING 1coord: 4..184
NoneNo IPR availablePANTHERPTHR23206MASK PROTEINcoord: 67..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67693contigH-elongata_contig67693:574..2586 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67693.14377.1mRNA_H-elongata_contig67693.14377.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67693 574..2586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67693.14377.1 ID=prot_H-elongata_contig67693.14377.1|Name=mRNA_H-elongata_contig67693.14377.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=251bp
YGETSHTQVANLLLGAGADVEFTTDQLFTPLLIASFNGNLRLAKRLVSAG
ANLEAKNEQHFTAACIAAQQGHTKLLGFLLDRGADIESRTATMLTPLLVA
AQEGRAPAVQLLLLRGANFEARNDRHLSPLALASDFGKIEVVRQLVDTGV
ETERRDFRGNTAIMHASREGHAQVVVELLKACADPSITNNDEVSPLSLAV
KHGHDDVVVLLLDGGANVKSANKSGFTALLRAAEGGRTDIYQVGIPDREC
Y
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf