prot_H-elongata_contig67566.14365.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig67566.14365.1
Unique Name	prot_H-elongata_contig67566.14365.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	132

Homology

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BLAST of mRNA_H-elongata_contig67566.14365.1 vs. uniprot
Match: A0A835YZH1_9STRA (Clathrin heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH1_9STRA)

HSP 1 Score: 189 bits (479), Expect = 5.240e-53
Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0

Query:    1 KVIESAERDGAFEQLVAYLRMARVEVKEAIIENELIYSLAKTNALGDLEEIIAAPNVANIEGIGERCFDEGMYEAARLLFKNIHNNAKLALCLVHLGQFREAVEAASKANAVNTWKQ 117
            +VIE AER+  FE LV +LRMAR EVKEA+IENELIY+ AKTNAL DLEE IAAPN+ANIEG G++CFDEG+YEAAR+LFKNI+NNAKLALC VHLGQ+REAVEAA+KANAVNTWKQ
Sbjct: 1167 EVIECAEREDKFEALVLFLRMARGEVKEAVIENELIYAYAKTNALADLEEFIAAPNMANIEGSGQKCFDEGLYEAARILFKNINNNAKLALCYVHLGQYREAVEAATKANAVNTWKQ 1283

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BLAST of mRNA_H-elongata_contig67566.14365.1 vs. uniprot
Match: A0A7S2Y320_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y320_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.370e-43
Identity = 73/111 (65.77%), Postives = 89/111 (80.18%), Query Frame = 0

Query:    7 ERDGAFEQLVAYLRMARVEVKEAIIENELIYSLAKTNALGDLEEIIAAPNVANIEGIGERCFDEGMYEAARLLFKNIHNNAKLALCLVHLGQFREAVEAASKANAVNTWKQ 117
            +    FE LV YL+MAR  +KEA ++ ELIY+ AKT  L DLEE IA PNVANI+ IGE+ F+EGMYEAA+LLF NI+NNAKLALC VHL Q+REAV+AA+KAN+V TWK+
Sbjct:    5 QEQAGFEDLVDYLKMARESIKEAELDTELIYAYAKTTRLADLEEFIAVPNVANIQEIGEQVFEEGMYEAAKLLFNNINNNAKLALCFVHLEQWREAVDAATKANSVRTWKE 115

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BLAST of mRNA_H-elongata_contig67566.14365.1 vs. uniprot
Match: A0A7S1XLU7_9STRA (Clathrin heavy chain n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLU7_9STRA)

HSP 1 Score: 160 bits (404), Expect = 6.620e-43
Identity = 75/116 (64.66%), Postives = 98/116 (84.48%), Query Frame = 0

Query:    2 VIESAERDGAFEQLVAYLRMARVEVKEAIIENELIYSLAKTNALGDLEEIIAAPNVANIEGIGERCFDEGMYEAARLLFKNIHNNAKLALCLVHLGQFREAVEAASKANAVNTWKQ 117
            VI +A  +  +  LV YL+MAR  VKEA+++ E IY+LAK +ALGDLEE I+APN+ANI+ IGERCFDEGMYEAA+LLF NI+NNAKLALC VH+ Q+REAV+AA++AN+++TWK+
Sbjct: 1165 VIGAAHTEENYGDLVIYLKMARNHVKEALVDTEYIYALAKESALGDLEEFISAPNIANIQNIGERCFDEGMYEAAKLLFSNINNNAKLALCYVHMSQYREAVDAATRANSISTWKE 1280

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BLAST of mRNA_H-elongata_contig67566.14365.1 vs. uniprot
Match: D7FWD1_ECTSI (Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWD1_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 1.680e-42
Identity = 87/117 (74.36%), Postives = 91/117 (77.78%), Query Frame = 0

Query:    1 KVIESAERDGAFEQLVAYLRMARVEVKEAIIENELIYSLAKTNALGDLEEIIAAPNVANIEGIGERCFDEGMYEAARLLFKNIHNNAKLALCLVHLGQFREAVEAASKANAVNTWKQ 117
            +VIE+AERDGAFEQLV YLRMAR EVKEAIIENELIYSLAKTNALGDLEEIIAAPNVANIEGIGERCFDEGMYE                        +REAVEAA+KANAVNTWKQ
Sbjct: 1149 EVIEAAERDGAFEQLVLYLRMARKEVKEAIIENELIYSLAKTNALGDLEEIIAAPNVANIEGIGERCFDEGMYE------------------------YREAVEAATKANAVNTWKQ 1241

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BLAST of mRNA_H-elongata_contig67566.14365.1 vs. uniprot
Match: A0A4D9DAY4_9STRA (Clathrin heavy chain n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAY4_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.760e-40
Identity = 74/116 (63.79%), Postives = 94/116 (81.03%), Query Frame = 0

Query:    2 VIESAERDGAFEQLVAYLRMARVEVKEAIIENELIYSLAKTNALGDLEEIIAAPNVANIEGIGERCFDEGMYEAARLLFKNIHNNAKLALCLVHLGQFREAVEAASKANAVNTWKQ 117
            VI  A+R GAFE LV YL+M R ++KE  ++ E IYSLAKT  L +LEE IAAPNVANI+ IGER FDEG YEAA+LLF NI+NN++LALC ++L Q+REAV+AA KAN+++TWK+
Sbjct: 1161 VIAVAQRYGAFEDLVRYLKMVRKQIKEPHVDTEYIYSLAKTGKLPELEEFIAAPNVANIQSIGERLFDEGNYEAAKLLFNNINNNSRLALCFINLNQYREAVDAAQKANSISTWKE 1276

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BLAST of mRNA_H-elongata_contig67566.14365.1 vs. uniprot
Match: A0A2P4XMC0_9STRA (Clathrin heavy chain n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMC0_9STRA)

HSP 1 Score: 151 bits (381), Expect = 7.970e-40
Identity = 72/116 (62.07%), Postives = 93/116 (80.17%), Query Frame = 0

Query:    2 VIESAERDGAFEQLVAYLRMARVEVKEAIIENELIYSLAKTNALGDLEEIIAAPNVANIEGIGERCFDEGMYEAARLLFKNIHNNAKLALCLVHLGQFREAVEAASKANAVNTWKQ 117
            VI +AER   + +L+ YL+MAR  VKE  ++  LIY+ AKT   GDLEE I++PNVA I+ IGERC+DEGMY AA+LLF+NI+NNAKLA+C V LG+FREAV+AA+KAN+V TWK+
Sbjct:  412 VIAAAERINNYNELIPYLKMARNTVKEQYLDTSLIYAYAKTEKYGDLEEFISSPNVAQIQNIGERCYDEGMYNAAKLLFQNINNNAKLAICYVRLGKFREAVDAATKANSVGTWKE 527

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BLAST of mRNA_H-elongata_contig67566.14365.1 vs. uniprot
Match: A0A225V906_9STRA (Clathrin heavy chain (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V906_9STRA)

HSP 1 Score: 151 bits (381), Expect = 8.160e-40
Identity = 72/116 (62.07%), Postives = 93/116 (80.17%), Query Frame = 0

Query:    2 VIESAERDGAFEQLVAYLRMARVEVKEAIIENELIYSLAKTNALGDLEEIIAAPNVANIEGIGERCFDEGMYEAARLLFKNIHNNAKLALCLVHLGQFREAVEAASKANAVNTWKQ 117
            VI +AER   + +L+ YL+MAR  VKE  ++  LIY+ AKT   GDLEE I++PNVA I+ IGERC+DEGMY AA+LLF+NI+NNAKLA+C V LG+FREAV+AA+KAN+V TWK+
Sbjct:  748 VIAAAERINNYNELIPYLKMARNTVKEQYLDTSLIYAYAKTEKYGDLEEFISSPNVAQIQNIGERCYDEGMYNAAKLLFQNINNNAKLAICYVRLGKFREAVDAATKANSVGTWKE 863

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BLAST of mRNA_H-elongata_contig67566.14365.1 vs. uniprot
Match: F0XZJ1_AURAN (Clathrin heavy chain n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZJ1_AURAN)

HSP 1 Score: 151 bits (381), Expect = 8.300e-40
Identity = 74/117 (63.25%), Postives = 97/117 (82.91%), Query Frame = 0

Query:    1 KVIESAERDGAFEQLVAYLRMARVEVKEAIIENELIYSLAKTNALGDLEEIIAAPNVANIEGIGERCFDEGMYEAARLLFKNIHNNAKLALCLVHLGQFREAVEAASKANAVNTWKQ 117
            +VI +AER+ ++E LV +L MAR  VKEA ++  LIY+ AK+N LGDLEE IAAPNVA+I+ IGERCFDEG++ AA+LLF +I+NNAKLALC V+L  +REAV+AA KAN+V+TWK+
Sbjct: 1142 EVIAAAEREDSYETLVPFLAMARKHVKEAQLDTMLIYAYAKSNMLGDLEEFIAAPNVASIQSIGERCFDEGLFSAAKLLFASINNNAKLALCYVNLEMYREAVDAAHKANSVSTWKE 1258

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BLAST of mRNA_H-elongata_contig67566.14365.1 vs. uniprot
Match: A0A7S2WTJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTJ7_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.540e-39
Identity = 70/117 (59.83%), Postives = 96/117 (82.05%), Query Frame = 0

Query:    1 KVIESAERDGAFEQLVAYLRMARVEVKEAIIENELIYSLAKTNALGDLEEIIAAPNVANIEGIGERCFDEGMYEAARLLFKNIHNNAKLALCLVHLGQFREAVEAASKANAVNTWKQ 117
            +VI  AE  G+++ L  +L MAR ++KE  ++  LIY+ A+   LGDLEE ++APNVANI+ IGERCFDE M++AA++LF++I+NNAKLALC V+LG+FREAV+AASKANAV+TWK+
Sbjct: 1168 EVISKAEEAGSYDNLTPFLVMARKQIKEPTLDTMLIYAYARAEKLGDLEEFVSAPNVANIQNIGERCFDEAMFQAAKILFQSINNNAKLALCYVNLGKFREAVDAASKANAVSTWKE 1284

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BLAST of mRNA_H-elongata_contig67566.14365.1 vs. uniprot
Match: K3WLC2_GLOUD (Clathrin heavy chain n=31 Tax=Oomycota TaxID=4762 RepID=K3WLC2_GLOUD)

HSP 1 Score: 150 bits (378), Expect = 2.100e-39
Identity = 72/116 (62.07%), Postives = 92/116 (79.31%), Query Frame = 0

Query:    2 VIESAERDGAFEQLVAYLRMARVEVKEAIIENELIYSLAKTNALGDLEEIIAAPNVANIEGIGERCFDEGMYEAARLLFKNIHNNAKLALCLVHLGQFREAVEAASKANAVNTWKQ 117
            VI +AER   + +L+ YL+MAR  VKE  ++  LIY+ AK    GDLEE I+APNVA I+ IGERC+DEGMY AA+LLF+NI+NNAKLA+C V LG+FREAV+AA+KAN+V TWK+
Sbjct: 1155 VIAAAERANDYGELIPYLKMARNTVKEQYLDTSLIYAYAKCEKYGDLEEFISAPNVAQIQNIGERCYDEGMYNAAKLLFQNINNNAKLAICFVRLGKFREAVDAATKANSVGTWKE 1270

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig67566.14365.1 vs. uniprot

BLAST of mRNA_H-elongata_contig67566.14365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YZH1_9STRA	5.240e-53	79.49	Clathrin heavy chain n=1 Tax=Tribonema minus TaxID...	[more]
A0A7S2Y320_9STRA	2.370e-43	65.77	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A7S1XLU7_9STRA	6.620e-43	64.66	Clathrin heavy chain n=1 Tax=Phaeomonas parva TaxI...	[more]
D7FWD1_ECTSI	1.680e-42	74.36	Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A4D9DAY4_9STRA	1.760e-40	63.79	Clathrin heavy chain n=2 Tax=Monodopsidaceae TaxID...	[more]
A0A2P4XMC0_9STRA	7.970e-40	62.07	Clathrin heavy chain n=1 Tax=Phytophthora palmivor...	[more]
A0A225V906_9STRA	8.160e-40	62.07	Clathrin heavy chain (Fragment) n=1 Tax=Phytophtho...	[more]
F0XZJ1_AURAN	8.300e-40	63.25	Clathrin heavy chain n=1 Tax=Aureococcus anophagef...	[more]
A0A7S2WTJ7_9STRA	1.540e-39	59.83	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
K3WLC2_GLOUD	2.100e-39	62.07	Clathrin heavy chain n=31 Tax=Oomycota TaxID=4762 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	SMART	SM00299	CLH_2	coord: 1..131 e-value: 3.8E-10 score: 49.7
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	PFAM	PF00637	Clathrin	coord: 1..120 e-value: 9.0E-24 score: 84.0
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat	PROSITE	PS50236	CHCR	coord: 1..131 score: 17.542
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 44..126 e-value: 1.3E-23 score: 85.4
None	No IPR available	PANTHER	PTHR10292	CLATHRIN HEAVY CHAIN RELATED	coord: 1..118
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 46..118

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig67566	contig	H-elongata_contig67566:425..1368 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig67566.14365.1	mRNA_H-elongata_contig67566.14365.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig67566 425..1368 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig67566.14365.1 ID=prot_H-elongata_contig67566.14365.1|Name=mRNA_H-elongata_contig67566.14365.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp
KVIESAERDGAFEQLVAYLRMARVEVKEAIIENELIYSLAKTNALGDLEE
IIAAPNVANIEGIGERCFDEGMYEAARLLFKNIHNNAKLALCLVHLGQFR
EAVEAASKANAVNTWKQARETDTYHGHTSFY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000547	Clathrin_H-chain/VPS_repeat
IPR011990	TPR-like_helical_dom_sf
IPR016024	ARM-type_fold