prot_H-elongata_contig67511.14362.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67511.14362.1
Unique Nameprot_H-elongata_contig67511.14362.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length241
Homology
BLAST of mRNA_H-elongata_contig67511.14362.1 vs. uniprot
Match: A0A6H5KGK9_9PHAE (Glycine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK9_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 3.880e-115
Identity = 184/250 (73.60%), Postives = 211/250 (84.40%), Query Frame = 0
Query:    1 MAALEAMSENEEEVLAFQKEMEVNEKATLGE-EGFEITKGMCSWTKSTKKISEIKYTPSVIEPSFGIGRILYSLLEHSFYVREAKDGDDDGGMKRGVMAFRPLVAPIKCAVLPLSSQASFMPLCARVMDALGGLHLSAKLDSSGAAVGRRYARMDELGVPFGVTVDFQTVEDETVTLRERDSMSQIRMPVADVAPLVTRLVKEETAWKDCTLKYPMVRDEKGGASD----------DNDGSALATERTPC 239
            +AALEA+SE EE++LAFQ ++E   KA+LGE  GFEITKGMCSWTK +KKISEIK+TPSVIEPSFGIGRIL+SLLEHSFYVRE ++G DD  MKRGVMAFRPLVAPIKCAV PLSSQA+F+PLC RVMDALG +HLSAK+D+SGAA+GRRYARMDELG PFGVTVDFQTVEDETVTLRERDSM+QIRMP+ADVAPL+ RLV EE AWK+CT +YP+VR+E G ++               SAL TE TPC
Sbjct:  534 IAALEALSEKEEDLLAFQAKLEEEGKASLGEGAGFEITKGMCSWTKGSKKISEIKFTPSVIEPSFGIGRILHSLLEHSFYVRETEEGADDKDMKRGVMAFRPLVAPIKCAVFPLSSQAAFIPLCGRVMDALGKMHLSAKMDASGAALGRRYARMDELGAPFGVTVDFQTVEDETVTLRERDSMTQIRMPMADVAPLMARLVTEEVAWKECTSQYPVVREEVGDSTSAXXXXXXXXXXXXXSALTTESTPC 783          
BLAST of mRNA_H-elongata_contig67511.14362.1 vs. uniprot
Match: D7FJG6_ECTSI (Glycyl-tRNA Synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJG6_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 4.150e-109
Identity = 182/250 (72.80%), Postives = 206/250 (82.40%), Query Frame = 0
Query:    1 MAALEAMSENEEEVLAFQKEMEVNEKATLGEEG-FEITKGMCSWTKSTKKISEIKYTPSVIEPSFGIGRILYSLLEHSFYVREAKDGDDDGGMKRGVMAFRPLVAPIKCAVLPLSSQASFMPLCARVMDALGGLHLSAKLDSSGAAVGRRYARMDELGVPFGVTVDFQTVEDETVTLRERDSMSQIRMPVADVAPLVTRLVKEETAWKDCTLKYPMVRDEKGGASDDNDG----------SALATERTPC 239
            +AALEA+SE EE++LAFQ ++E   KA+LGE   FEITKGMCSWTK +KKISEIK+TPSVIEPSFGIGRIL+SLLEHSFYVREA++G DD  MKRGVMAFRPLVAPIKCAV PLSSQA+F PLC RVMDALG +HLSAK+D+SGAA+GRRYARMDELG PFGVTVDFQTVEDETVTLRERDSM+QIRMP+ DVAPL+ RLV EE AWK+CT KYP+VR+E                    +AL TE TPC
Sbjct:  931 IAALEALSEKEEDLLAFQAKLEEEGKASLGEGAVFEITKGMCSWTKGSKKISEIKFTPSVIEPSFGIGRILHSLLEHSFYVREAEEGADDKDMKRGVMAFRPLVAPIKCAVFPLSSQAAFFPLCGRVMDALGKMHLSAKMDASGAALGRRYARMDELGAPFGVTVDFQTVEDETVTLRERDSMTQIRMPMPDVAPLMARLVTEEVAWKECTSKYPVVREEADXXXXXXXXXXXXXXXXXXNALTTESTPC 1180          
BLAST of mRNA_H-elongata_contig67511.14362.1 vs. uniprot
Match: A0A7S2RC37_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RC37_9STRA)

HSP 1 Score: 215 bits (548), Expect = 2.400e-65
Identity = 121/237 (51.05%), Postives = 157/237 (66.24%), Query Frame = 0
Query:    2 AALEAMSENEEEVLAFQKEMEVNEKATLGEEGFEITKGMCSWTKSTKKISEIKYTPSVIEPSFGIGRILYSLLEHSFYVREAKDGDDDGGMKRGVMAFRPLVAPIKCAVLPLSSQASFM-PLCARVMDALGGLHLSAKLDSSGAAVGRRYARMDELGVPFGVTVDFQTVEDETVTLRERDSMSQIRMPVADVAPLVTRLVKEETAWKDCTLKYPMVRDEKGGASDDNDGSALATERT 237
            AALEA++E  E+       +E     T   +G+ + K M SWT+ TKK+ EIKYTPSVIEPSFG+GRILYSLLEHSFY R   DGD+    +R VM F P VAPIKCAVLP+S+    + P+   +  +L GL L+ ++D+S   VGRRYAR+DE+GVPF  TVDFQT ED TVTLRERDS+ QIR+P  +V PL+  +    ++WKD   KYP+V+ +K    +D+D     T  T
Sbjct:  111 AALEALAERWEDFEPIATALETE--GTTNVDGYTVEKHMVSWTRHTKKVHEIKYTPSVIEPSFGMGRILYSLLEHSFYQR---DGDE----QRCVMKFPPTVAPIKCAVLPISNSEDLLNPIAHEIAASLMGLDLATRVDTSSTTVGRRYARVDEMGVPFACTVDFQTPEDGTVTLRERDSLQQIRIPKDEVTPLIYSMCHGRSSWKDAAQKYPIVQVKK----EDSDADQPETPTT 334          
BLAST of mRNA_H-elongata_contig67511.14362.1 vs. uniprot
Match: A0A836C9B2_9STRA (Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B2_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.870e-64
Identity = 118/231 (51.08%), Postives = 161/231 (69.70%), Query Frame = 0
Query:    1 MAALEAMSENEEEVLAFQKEMEVNEKATLGEEGFEITKGMCSWTKSTKKISEIKYTPSVIEPSFGIGRILYSLLEHSFYVREAKDGDDDGGMKRGVMAFRPLVAPIKCAVLPLSSQASFMPLCARVMDALGGLHLSAKLDSSGAAVGRRYARMDELGVPFGVTVDFQTVEDETVTLRERDSMSQIRMPVADVAPLVTRLVKEETAWKDCTLKYPMVRDEKGGASDDNDGSA 231
            MAAL+A++++   + AF+ +++ +  A L   GF + + M +W K+ K + E K+TPSVIEPSFGIGR+LYSLLEHSFY RE   GD+    +RGV  F   VAPIKCA+ PLS+  +F PLC+ V   LG + ++ + D+SG ++GRRYAR DE+GVPF VTVDFQ+VED TVTLRERDSM+QIR+ VA +  L+  LV    AW+  T ++P+VR E     ++ DGSA
Sbjct:  504 MAALDALADDHPALEAFEAKLDTDGSAELA--GFTVDRAMIAWKKTEKMVQEEKFTPSVIEPSFGIGRVLYSLLEHSFYTRE---GDE----QRGVFRFNAAVAPIKCAIFPLSANDAFNPLCSEVAKLLGAVDVATRTDASGVSLGRRYARADEIGVPFAVTVDFQSVEDNTVTLRERDSMAQIRLAVAALPDLLVSLVFRRAAWQQATERFPVVRSE----DEEGDGSA 721          
BLAST of mRNA_H-elongata_contig67511.14362.1 vs. uniprot
Match: A0A448Z3E7_9STRA (Glycine--tRNA ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3E7_9STRA)

HSP 1 Score: 211 bits (537), Expect = 3.270e-61
Identity = 112/236 (47.46%), Postives = 159/236 (67.37%), Query Frame = 0
Query:    3 ALEAMSENEEEVLAFQKEMEVNEKATLGEEGFEITKGMCSWTKSTKKISEIKYTPSVIEPSFGIGRILYSLLEHSFYVREAKDGDDDGGMKRGVMAFRPLVAPIKCAVLPLSSQASFMPLCARVMDALGGLHLSAKLDSSGAAVGRRYARMDELGVPFGVTVDFQTVEDETVTLRERDSMSQIRMPVADVAPLVTRLVKEETAWKDCTLKYPMVRDEKGGASDDNDGSALATERTP 238
            AL+ ++E+ ++     K +E + K T+  +GFE+TK M SW +STKK+ E+K+TPSVIEPSFG+GRILYSLLEHSFY+RE  +       +R VM F+P VAP KCAVLP+SS   F  +   +  +L    L+ ++D S AA+GRRYAR DE+GVPF VTVDF T++D++VT+RERDSM Q+R+P ++V  ++  ++   T+W + T KYP+V+       DD +G   A    P
Sbjct:  358 ALDKLAESWKDFEPIAKALEADGKVTV--DGFEVTKDMVSWEQSTKKVHELKFTPSVIEPSFGMGRILYSLLEHSFYIRENDE-------QRCVMKFKPQVAPQKCAVLPISSSPEFNAIVDGIAASLMEYDLATRVDKSTAALGRRYARSDEVGVPFAVTVDFDTLKDDSVTIRERDSMVQVRLPKSEVPHVIYDIIHNRTSWDEVTSKYPVVQ------VDDGEGGGAAAPAAP 578          
BLAST of mRNA_H-elongata_contig67511.14362.1 vs. uniprot
Match: A0A1Z5KMP6_FISSO (Glycine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KMP6_FISSO)

HSP 1 Score: 213 bits (541), Expect = 5.100e-61
Identity = 109/190 (57.37%), Postives = 139/190 (73.16%), Query Frame = 0
Query:   32 EGFEITKGMCSWTKSTKKISEIKYTPSVIEPSFGIGRILYSLLEHSFYVREAKDGDDDGGMKRGVMAFRPLVAPIKCAVLPLSSQASFMPLCARVMDALGGLHLSAKLDSSGAAVGRRYARMDELGVPFGVTVDFQTVEDETVTLRERDSMSQIRMPVADVAPLVTRLVKEETAWKDCTLKYPMVRDEKG 221
            +GFEITK M SWTKS+KK+ E+K+TPSVIEPSFG+GRILYSLLEHSFY RE   GD+    +R VM F P VAP KCAV P+SS A    +   +   L    L+ ++D S AA+GRRYAR DELGVPF VTVDF+T++D TVTLRERDSM Q+R+P +++ PL+ R+V  +  W   T KYP+V+ ++G
Sbjct:  494 DGFEITKEMVSWTKSSKKVHEVKFTPSVIEPSFGMGRILYSLLEHSFYTRE---GDE----QRTVMRFNPQVAPQKCAVFPISSNAECNAVVDEIAADLMDSDLATRVDKSSAALGRRYARTDELGVPFAVTVDFETLKDNTVTLRERDSMKQVRLPKSEITPLLMRIVHGKLNWDAVTKKYPLVQVDEG 676          
BLAST of mRNA_H-elongata_contig67511.14362.1 vs. uniprot
Match: A0A7S2HL85_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HL85_9STRA)

HSP 1 Score: 202 bits (515), Expect = 7.050e-61
Identity = 114/234 (48.72%), Postives = 151/234 (64.53%), Query Frame = 0
Query:    3 ALEAMSENEEEVLAFQKEMEVNEKATLGEEGFEITKGMCSWTKSTKKISEIKYTPSVIEPSFGIGRILYSLLEHSFYVREAKDGDDDGGMKRGVMAFRPLVAPIKCAVLPLSSQASFMPLCARVMDALGGLHLSAKLDSSGAAVGRRYARMDELGVPFGVTVDFQTVEDETVTLRERDSMSQIRMPVADVAPLVTRLVKEETAWKDCTLKYPMVR-DEKGGASDDNDGSALATE 235
            ALEA++EN E+       +E   KA +  +GFEITK M +W K++KK+ EIK+TPSVIEPSFG+GRILYSLLEHSFY RE+ +       +R VM F P VAP KCAVLP+SS      +   +   L    +S ++D S A++GRRYAR DE+GVPF VTVDF++++D TVTLRERDS  QIR+P  D+  L+   V  +  W D   KYP+V+ +E G    D +   +  E
Sbjct:   73 ALEALAENWEDFSKVASALEDEGKAVV--DGFEITKDMVTWKKTSKKVHEIKFTPSVIEPSFGMGRILYSLLEHSFYQRESDE-------QRCVMRFNPQVAPNKCAVLPISSGDEVNAIVDEIAADLMDSDISTRVDKSTASLGRRYARADEVGVPFAVTVDFESIKDNTVTLRERDSTVQIRLPKEDITKLIFDFVHAKMTWDDAKEKYPVVQVNEDGETKADPNAKTVVVE 297          
BLAST of mRNA_H-elongata_contig67511.14362.1 vs. uniprot
Match: K0T150_THAOC (HGTP_anticodon domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T150_THAOC)

HSP 1 Score: 202 bits (514), Expect = 6.610e-60
Identity = 109/214 (50.93%), Postives = 145/214 (67.76%), Query Frame = 0
Query:    3 ALEAMSENEEEVLAFQKEMEVNEKATLGEEGFEITKGMCSWTKSTKKISEIKYTPSVIEPSFGIGRILYSLLEHSFYVREAKDGDDDGGMKRGVMAFRPLVAPIKCAVLPLSSQASFMPLCARVMDALGGLHLSAKLDSSGAAVGRRYARMDELGVPFGVTVDFQTVEDETVTLRERDSMSQIRMPVADVAPLVTRLVKEETAWKDCTLKYPMV 216
            ALE+++EN  +       +E + KAT+  +GFEIT+GM +W K+TKK+ EIK+TPSVIEPSFG+GRILYSLLEH FY R+A +       +R VM F+P VAP KCAVLPLSS      +   +   L    L+ ++D S   +GR+YAR DE+GVPF +TVDF+T++D TVTLRERDS  QIR+P +DV  L+   V     W++ T KYP+V
Sbjct:  171 ALESLAENWADFEPIASALETDGKATV--DGFEITQGMVTWKKTTKKVHEIKFTPSVIEPSFGMGRILYSLLEHCFYQRDADE-------QRCVMRFKPAVAPQKCAVLPLSSSDELNAVIDEIAADLLESDLATRVDKSSTTLGRKYARADEVGVPFAITVDFETLKDGTVTLRERDSTVQIRLPKSDVTRLIFDFVHGRDTWEEVTKKYPVV 375          
BLAST of mRNA_H-elongata_contig67511.14362.1 vs. uniprot
Match: A0A1E7FVA0_9STRA (Glycine--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVA0_9STRA)

HSP 1 Score: 206 bits (525), Expect = 2.070e-59
Identity = 113/237 (47.68%), Postives = 159/237 (67.09%), Query Frame = 0
Query:    3 ALEAMSENEEEVLAFQKEMEVNEKATLGEEGFEITKGMCSWTKSTKKISEIKYTPSVIEPSFGIGRILYSLLEHSFYVREAKDGDDDGGMKRGVMAFRPLVAPIKCAVLPLSSQASFMPLCARVMDALGGLHLSAKLDSSGAAVGRRYARMDELGVPFGVTVDFQTVEDETVTLRERDSMSQIRMPVADVAPLVTRLVKEETAWKDCTLKYPMVRDEKGGASDDNDGSA-LATERTP 238
            AL+A++E+ ++     K ++ + K ++  +GFE+TK M SW ++ KK+ E K+TPSVIEPSFG+GRILYSLLEHSFY R+  +       +R VM F P VAP KCAVLP+SS   F  +   +  +L    L+ ++D S AA+GRRYAR DE+GVPF +TVDF T+ D++VT+RERDSM QIR+P  DV  ++  +V     W+ CT KYP+V+ ++G   +D D SA  A + TP
Sbjct:  358 ALDALAEDWKDFEPIAKALDADGKTSI--DGFEVTKDMVSWAQTKKKVHEAKFTPSVIEPSFGMGRILYSLLEHSFYQRDMDE-------QRCVMRFNPRVAPQKCAVLPISSGPEFNVVVDEIAASLMDYDLATRVDKSTAALGRRYARSDEIGVPFAITVDFDTLSDDSVTIRERDSMVQIRLPKKDVHSVIFDIVHGRITWESCTEKYPVVQVDEG---EDGDNSAPAAPKETP 582          
BLAST of mRNA_H-elongata_contig67511.14362.1 vs. uniprot
Match: A0A7S0CDI8_9STRA (Glycine--tRNA ligase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDI8_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.070e-58
Identity = 114/235 (48.51%), Postives = 155/235 (65.96%), Query Frame = 0
Query:    4 LEAMSENEEEVLAFQKEMEVNEKATLGEEGFEITKGMCSWTKSTKKISEIKYTPSVIEPSFGIGRILYSLLEHSFYVREAKDGDDDGGMKRGVMAFRPLVAPIKCAVLPLSSQASFMPLCARVMDALGGLHLSAKLDSSGAAVGRRYARMDELGVPFGVTVDFQTVEDETVTLRERDSMSQIRMPVADVAPLVTRLVKEETAWKDCTLKYPMVRDEKGGASDDNDGSALATERTP 238
            L+ +++N ++     + +E N + T+G   F+ITK M SWTK++KK+ EIKY PSV+EPSFG+GRILYSLLEHSFYVRE+ +       +R VM F   VAP KCA+LP+SS A    +   +   L    +S + D S AA+GRRYAR DELGVPF VTVDF T+ D +VTLRERD+M QIR+P +DV  L++ +V  +T W+ C +KY +V+       DD +G+A A    P
Sbjct:  449 LDDLADNWDDFEPIAQALEANGETTVG--NFKITKDMVSWTKTSKKVHEIKYMPSVVEPSFGMGRILYSLLEHSFYVRESDE-------QRCVMGFNARVAPTKCAILPISSNAECNAVVDEIALDLMENDISIRNDKSTAALGRRYARADELGVPFAVTVDFDTLVDHSVTLRERDTMKQIRLPKSDVTTLISAMVMGKTTWEKCMMKYQVVQ------VDDGEGNAKAELAKP 668          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67511.14362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGK9_9PHAE3.880e-11573.60Glycine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D7FJG6_ECTSI4.150e-10972.80Glycyl-tRNA Synthetase n=1 Tax=Ectocarpus siliculo... [more]
A0A7S2RC37_9STRA2.400e-6551.05Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A836C9B2_9STRA1.870e-6451.08Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A448Z3E7_9STRA3.270e-6147.46Glycine--tRNA ligase n=1 Tax=Pseudo-nitzschia mult... [more]
A0A1Z5KMP6_FISSO5.100e-6157.37Glycine--tRNA ligase n=2 Tax=Fistulifera solaris T... [more]
A0A7S2HL85_9STRA7.050e-6148.72Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
K0T150_THAOC6.610e-6050.93HGTP_anticodon domain-containing protein n=1 Tax=T... [more]
A0A1E7FVA0_9STRA2.070e-5947.68Glycine--tRNA ligase n=1 Tax=Fragilariopsis cylind... [more]
A0A7S0CDI8_9STRA1.070e-5848.51Glycine--tRNA ligase n=1 Tax=Proboscia inermis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002315Glycyl-tRNA synthetasePRINTSPR01043TRNASYNTHGLYcoord: 146..165
score: 66.39
coord: 57..69
score: 74.36
IPR036621Anticodon-binding domain superfamilyGENE3D3.40.50.800coord: 105..220
e-value: 1.8E-38
score: 132.9
NoneNo IPR availableGENE3D3.30.930.10coord: 4..94
e-value: 7.9E-9
score: 36.9
NoneNo IPR availablePANTHERPTHR10745:SF0GLYCINE--TRNA LIGASEcoord: 2..218
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 47..110
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 95..214
IPR004154Anticodon-bindingPFAMPF03129HGTP_anticodoncoord: 107..196
e-value: 6.0E-21
score: 74.4
IPR027031Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2PANTHERPTHR10745GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2coord: 2..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67511contigH-elongata_contig67511:112..2073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67511.14362.1mRNA_H-elongata_contig67511.14362.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67511 109..2073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67511.14362.1 ID=prot_H-elongata_contig67511.14362.1|Name=mRNA_H-elongata_contig67511.14362.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=241bp
MAALEAMSENEEEVLAFQKEMEVNEKATLGEEGFEITKGMCSWTKSTKKI
SEIKYTPSVIEPSFGIGRILYSLLEHSFYVREAKDGDDDGGMKRGVMAFR
PLVAPIKCAVLPLSSQASFMPLCARVMDALGGLHLSAKLDSSGAAVGRRY
ARMDELGVPFGVTVDFQTVEDETVTLRERDSMSQIRMPVADVAPLVTRLV
KEETAWKDCTLKYPMVRDEKGGASDDNDGSALATERTPCAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002315tRNA-synt_gly
IPR036621Anticodon-bd_dom_sf
IPR004154Anticodon-bd
IPR027031Gly-tRNA_synthase/POLG2