prot_H-elongata_contig67439.14348.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67439.14348.1
Unique Nameprot_H-elongata_contig67439.14348.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length515
Homology
BLAST of mRNA_H-elongata_contig67439.14348.1 vs. uniprot
Match: D7FH12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH12_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 1.620e-91
Identity = 262/617 (42.46%), Postives = 305/617 (49.43%), Query Frame = 0
Query:   14 VLPAGLVSIMEDDYAPQVRAAAAAAATSLVKTAPLRKWISPSXXXXXXXXXXXRSGGQGIGHRAESMMLRLQRSLVQCLSREESPAVLAKLCACSGALVAGMPYAAASALPGSRSVRRDGCSDDVFPTTTDS--------------LEGSLRCLLSELVRIMTDGGAEPSARISASQALTAAFSTKEPIAAVDAFLYTFRCD------STPRGG-----RTPPRESGTRRILMPLGTAAAMRSDRLGSPTPLKAGSADDNRGNRFVSGRTR-GAVERATTEYPSTRR----------------------------------------GPVRKGGDNGL---------LETGTTAEPNEVPS-------------SPQPRATAIGGAPESDTGEPFVHMLIVSAGSPGQLRPHALGLLARIARSYPAHLSCGGRGDGGASE-----TWGKVSALLMRCFADPDQNLRLHALKVVESLLLVREERAISVTASDAPEFYKDVESRFGAEERAATG------------------------------RGRGGSSGDGDSGLWEDLIQKHLQRALEDPYHGVRAVACSCHGCLLGSDWDAFSDGGRARCLDRLLAATRDSAAG 507
            VLPAGLVSIME D+APQV              +PLRKW+  +XXXXXXXXXXX     GIG R ESMMLRL RSLV CL++E+SPAV+AKLC+C+GAL+A MPYA + A  G+                                 +E SL  LL EL R+M D  AEPSARI+ASQALTA FSTKEPIAA+D+FL +FRC       S+ RG       TPP  S         G A A+      SP PL+ GSADD RGNRFV G  R G V+                                                   G +R     G+         L    T + +  P+             S    A   G   +    + FV  LI  AG+PGQLR  ALGLL RI RSYPAHLS G    G  +E     TW +VSALL+RCFADPDQNLRLHALKV+E+LLL R E+A +  A   P   +      G    AA                                   GG        +W DL+QKHLQRALEDPYHGVRAVACSCH  LL SDW+AFSD  R RCL R+LAATRD AAG
Sbjct:  399 VLPAGLVSIMESDHAPQV--------------SPLRKWMMLAXXXXXXXXXXX-----GIGERVESMMLRLHRSLVLCLAQEKSPAVVAKLCSCTGALIAEMPYATSQAASGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEESLGDLLRELARLMVDVAAEPSARIAASQALTAVFSTKEPIAAIDSFLLSFRCSAAGGLPSSCRGSWGGSRATPPPSSPASAARRGNG-ANAVAGSGAWSPLPLRPGSADD-RGNRFVGGVARNGGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVXXXXXGGLRASDREGVRASDQMPPPLPREATVDDDTAPAXXXXXXXXXXGLASASEGANGRGDGVDGGGSDSFVDRLIALAGAPGQLRAEALGLLTRIGRSYPAHLSGGCTARGTVAEKTTATTWERVSALLLRCFADPDQNLRLHALKVLEALLLARAEQA-AAAAEALPVAGEKSSGTAGXXXXAAESVSPKQKPRSETXXXXXXXXXXXXXXXXXXXXXXGGK-------VWRDLVQKHLQRALEDPYHGVRAVACSCHASLLKSDWEAFSDRERERCLGRVLAATRDRAAG 986          
BLAST of mRNA_H-elongata_contig67439.14348.1 vs. uniprot
Match: A0A6H5K415_9PHAE (DUF4042 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K415_9PHAE)

HSP 1 Score: 286 bits (732), Expect = 3.640e-81
Identity = 266/700 (38.00%), Postives = 308/700 (44.00%), Query Frame = 0
Query:   14 VLPAGLVSIMEDDYAPQVRAAAAAAATSLVKTAPLRKWISPSXXXXXXXXXXXRSGGQGIGHRAESMMLRLQRSLVQCLSREESPAVLAKLCACSGALVAGMPYAAASALPGSRSVRRDGCSDDVFPTTT--------------DSLEGSLRCLLSELVRIMTDGGAEPSARI---------------------------------------------SASQALTAAFSTKEPIAAVDAFLYTFRCDSTPR----------GGRTPPRESGTRRILMPLGTAAAMRSDRLGSPTPLKAGSADDNRGNRFVSGRTRGAVERAT--------------------------------------------TEYPSTRRGPVRKGGDNGL---------LETGTTAEPNEVPSS----PQPRATAIGGAPESDTGEP--------FVHMLIVSAGSPGQLRPHALGLLARIARSYPAHLSCGGRGDGGASET-----WGKVSALLMRCFADPDQNLRLHALKVVESLLLVREER-------------AISV-------TASDAPEFYKDVESRFG--AEERAATG-------RGRGGSSGD------------------------GDSG--------------LWEDLIQKHLQRALEDPYHGVRAVACSCHGCLLGSDWDAFSDGGRARCLDRLLAATRDSAAG 507
            VLPAGLVSIME D APQVRAAA                    XXXXXXXXXXX     GIG R ESMMLRL RSLV CL++E+SPAV+AKLC+C+GAL+A MPYA + A  G+                                 +E SL  LL EL R+M D  AEPSARI                                             S+SQALTA FSTKEP+AA+D+FL +FRC +             G R  P  S           A A+      SP PL+ GSADD RGNRFV G  R                                                    +     RG +R     G          L   +T + +  P++    P P   A      +D G+         FV  LI  AG+PGQLR  ALGLL RI RSYPAHLS G    G  +ET     W +VSALL+RCFADPDQNLRLHALKV+E+LLL R E+             A+SV       TA         V  +    +E  AA G        G G S G                         G SG              +W DL+QKHLQRALEDPYHGVRAVACSCH  LL SDW+AFSD  R RCL R+LAATRD AAG
Sbjct:  372 VLPAGLVSIMESDLAPQVRAAA----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGERVESMMLRLHRSLVLCLAQEKSPAVVAKLCSCTGALIAEMPYATSQAASGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVEESLGDLLRELARLMVDVAAEPSARIAGASFFHDXXXXXXXXXNLLYFCLALLCSVLVQSWPLDRASYRSVSSSQALTAVFSTKEPVAAIDSFLLSFRCSAAGGLPSSCGGSWGGSRATPPSSSPASAARRGNGANAVAGPGAWSPLPLRPGSADD-RGNRFVGGVARNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRGADVGGRARGGLRASDRRGARASDQMPPPLPRESTVDDDTAPAAAXXXPAPAGLAAPSEGANDRGDDGDGGGGDSFVDRLIALAGAPGQLRAEALGLLTRIGRSYPAHLSGGCSARGAVAETTTATTWERVSALLLRCFADPDQNLRLHALKVLEALLLARAEQXXXXXXXXXXXAEALSVAGENFSGTAGGXXXXXXSVSPKQNPLSETAAAAGGLSAEGVEGAGLSQGTPISNVAEXXXXXXXXXXXERRGVVGSSGTAAXXXXXXXXXXKVWRDLVQKHLQRALEDPYHGVRAVACSCHASLLKSDWEAFSDPERDRCLGRVLAATRDRAAG 1066          
BLAST of mRNA_H-elongata_contig67439.14348.1 vs. uniprot
Match: W7TRQ9_9STRA (Armadillo-like helical n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRQ9_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 6.060e-11
Identity = 59/166 (35.54%), Postives = 76/166 (45.78%), Query Frame = 0
Query:  335 RPHALGLLARIARSYPAHLSCGGRGDGGASETWGKVSALLMRCFADPDQNLRLHALKVVESLLLVREERAISVTASDAPEFYKDVESRFGAEERAATGRGRGGSSGDGDSGLWEDLIQKHLQRALEDPYHGVRAVACSCHGCLLGSDWDAFSDGGRARCLDRLLAA 500
            R  AL LL R+AR Y   L          S        +L+  F   DQN+RLHALKVVE LL  R+              +K  E   G   R  TG G+G    +G    W   + +H++ A  DPYHGVRAVAC+C       DW     GG  R  +RL+++
Sbjct:   20 RQDALLLLGRVARGYGCLLLSP------PSRLHWFQERVLLGNFGGGDQNIRLHALKVVEELLQWRK--------------HKKTEDIAGQGRREGTG-GKGKRREEGSLEGWVFFLMRHVRHAFYDPYHGVRAVACACLSHFEAKDWREGWGGGLGR--ERLISS 162          
BLAST of mRNA_H-elongata_contig67439.14348.1 vs. uniprot
Match: A0A4D9CWS4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWS4_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.220e-9
Identity = 63/179 (35.20%), Postives = 77/179 (43.02%), Query Frame = 0
Query:  329 GSPGQLRPHALGLLARIARSY-------PAHLSCGGRGDGGASETWGKVSALLMRCFADPDQNLRLHALKVVESLLLVREERAISVTASDAPEFYKDVESRFGAEERAATGRGRGGSSGDGDSGLWEDLIQKHLQRALEDPYHGVRAVACSCHGCLLGSDWDAFSDGGRARCLDRLLAA 500
            GS    R  AL LL R+AR Y       P+ L             W +   LL   F   DQN+RLHALKVVE LL  R+              +K  E   G   R   G GR      G    W   +  H++ A  DPYHGVRAVAC+C       DW    DGG  R  +RL+++
Sbjct:  899 GSLSAERQDALLLLGRVARGYGYLLLSPPSRLQ------------WFQERVLLGN-FGGGDQNIRLHALKVVEELLQWRK--------------HKKTEDIAGQGRREGAG-GRKIRREGGSLEGWLLFLMHHVRHAFYDPYHGVRAVACACLSHFEAKDWREGWDGGVGR--ERLISS 1047          
BLAST of mRNA_H-elongata_contig67439.14348.1 vs. uniprot
Match: A0A835Z6I4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I4_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.350e-6
Identity = 46/96 (47.92%), Postives = 52/96 (54.17%), Query Frame = 0
Query:  304 RATAIGGAPESDTGEPFVHMLIVSAGSPGQLRPHALGLLARIARSYPAHLSCGGRGDGGASETWGKVSALLMRCFADPDQNLRLHALKVVESLLLV 399
            R TA G        E FV  L+  A    +LR  AL +LARIA + P HL C G G  G S   G V   L  CF DPDQNLRLHALKV  + LL+
Sbjct:  513 RFTAEGLQEADGQPERFVACLLKLARR-SKLRTEALLVLARIASTLPHHLLCSGGGGCGDSGNSG-VRIALQLCFGDPDQNLRLHALKVRSTCLLL 606          
BLAST of mRNA_H-elongata_contig67439.14348.1 vs. uniprot
Match: K3WEJ0_GLOUD (DUF4042 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEJ0_GLOUD)

HSP 1 Score: 61.6 bits (148), Expect = 3.010e-6
Identity = 45/153 (29.41%), Postives = 67/153 (43.79%), Query Frame = 0
Query:  334 LRPHALGLLARIARSYPAHLSCGGRGDGGASETWGKVSALLMRCFADPDQNLRLHALKVVESLLLVREERAISVTASDAPEFYKDVESRFGAEERAATGRGRGGSSGDGDSGLWE----DLIQKHLQRALEDPYHGVRAVACSCHGCLLGSDW 482
            LR  AL LL++IA++Y   LS           TW +V+  ++  F DPD N+RL A+K++E+ +     +  S    + P       +  G    +     R   +    S L      D +  HL RA  D  H VRA  C+C   L  +DW
Sbjct:  572 LRLEALSLLSKIAKNYSPALSA----------TWRRVADFMLSAFQDPDPNVRLQAVKILENYI-----KGDSANRIEPPSTEDTATAAAGTSGASRGANHRWLYNAQHVSALSRKECLDFMATHLIRAFRDTSHHVRASVCACFTLLRPNDW 709          
BLAST of mRNA_H-elongata_contig67439.14348.1 vs. uniprot
Match: A0A7R9YCP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCP6_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 3.350e-6
Identity = 41/106 (38.68%), Postives = 53/106 (50.00%), Query Frame = 0
Query:  380 DPDQNLRLHALKVVESLLLVREERAISVTASDAPEFYKDVESRFGAEERAATGRGRGGSSGDGDSGLWEDLIQKHLQRA---LEDPYHGVRAVACSCHGCLLGSDW 482
            +PDQNLRLHA+KV+  LL  R++R                   FG  E A +  G+ G   +    LWE ++ + LQ A   L+D  HGVRAVA    G LL  DW
Sbjct:    8 NPDQNLRLHAVKVLGELLQCRKQR-------------------FGEAEDARSKDGQAGGEDETTLPLWEAVLDEILQVAAASLQDAAHGVRAVAVGALGYLLPEDW 94          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67439.14348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FH12_ECTSI1.620e-9142.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K415_9PHAE3.640e-8138.00DUF4042 domain-containing protein n=1 Tax=Ectocarp... [more]
W7TRQ9_9STRA6.060e-1135.54Armadillo-like helical n=1 Tax=Nannochloropsis gad... [more]
A0A4D9CWS4_9STRA3.220e-935.20Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A835Z6I4_9STRA1.350e-647.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K3WEJ0_GLOUD3.010e-629.41DUF4042 domain-containing protein n=1 Tax=Globispo... [more]
A0A7R9YCP6_9STRA3.350e-638.68Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13366MALARIA ANTIGEN-RELATEDcoord: 17..504
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 19..473

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67439contigH-elongata_contig67439:122..2589 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67439.14348.1mRNA_H-elongata_contig67439.14348.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67439 122..2589 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67439.14348.1 ID=prot_H-elongata_contig67439.14348.1|Name=mRNA_H-elongata_contig67439.14348.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=515bp
ADEAVLRVRESSPVLPAGLVSIMEDDYAPQVRAAAAAAATSLVKTAPLRK
WISPSPSAATATAGAGRSGGQGIGHRAESMMLRLQRSLVQCLSREESPAV
LAKLCACSGALVAGMPYAAASALPGSRSVRRDGCSDDVFPTTTDSLEGSL
RCLLSELVRIMTDGGAEPSARISASQALTAAFSTKEPIAAVDAFLYTFRC
DSTPRGGRTPPRESGTRRILMPLGTAAAMRSDRLGSPTPLKAGSADDNRG
NRFVSGRTRGAVERATTEYPSTRRGPVRKGGDNGLLETGTTAEPNEVPSS
PQPRATAIGGAPESDTGEPFVHMLIVSAGSPGQLRPHALGLLARIARSYP
AHLSCGGRGDGGASETWGKVSALLMRCFADPDQNLRLHALKVVESLLLVR
EERAISVTASDAPEFYKDVESRFGAEERAATGRGRGGSSGDGDSGLWEDL
IQKHLQRALEDPYHGVRAVACSCHGCLLGSDWDAFSDGGRARCLDRLLAA
TRDSAAGAWTVLFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold