prot_H-elongata_contig67216.14330.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67216.14330.1
Unique Nameprot_H-elongata_contig67216.14330.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
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BLAST of mRNA_H-elongata_contig67216.14330.1 vs. uniprot
Match: D7FH75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH75_ECTSI)

HSP 1 Score: 47.4 bits (111), Expect = 8.110e-5
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:    1 FLDPPSRLLYERVSGGKAPTLKPAELDAAIARARLIQETRRRR 43
            +LDP +RLLYERV G  APT   + LDAA+ R RL +E +RRR
Sbjct:   98 YLDPTTRLLYERVKGEAAPTFPASVLDAAVLRTRLAREGKRRR 140
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67216.14330.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH75_ECTSI8.110e-558.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67216contigH-elongata_contig67216:903..1079 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67216.14330.1mRNA_H-elongata_contig67216.14330.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67216 903..1519 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67216.14330.1 ID=prot_H-elongata_contig67216.14330.1|Name=mRNA_H-elongata_contig67216.14330.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
FLDPPSRLLYERVSGGKAPTLKPAELDAAIARARLIQETRRRRRLREKKA
REAAEATR*
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