prot_H-elongata_contig672.14328.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig672.14328.1
Unique Nameprot_H-elongata_contig672.14328.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
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BLAST of mRNA_H-elongata_contig672.14328.1 vs. uniprot
Match: A0A6H5JLX3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLX3_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 9.690e-20
Identity = 46/84 (54.76%), Postives = 54/84 (64.29%), Query Frame = 0 
Query:    5 ELALHLCGSSTNTWCKVGGLKVYPSLPAASYNWEMLYADTGK-----LFLHFNGRYKHVIAGFSV---PEKCNPSGHNHVNSFE 80
            +LAL LCGSSTNTWC++GGL VYPS P+  Y +E+L   TG+     LFLH+ G  KHVI G S    PE CN  G  H N FE
Sbjct:    3 QLALELCGSSTNTWCEMGGLAVYPSEPSPWYEFELLKRGTGEGSGPTLFLHYKGSNKHVIPGMSWKGHPEGCNQGGRRHRNFFE 86
[Close]
BLAST of mRNA_H-elongata_contig672.14328.1 vs. uniprot
Match: A0A6H5L183_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L183_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 2.310e-16
Identity = 39/88 (44.32%), Postives = 52/88 (59.09%), Query Frame = 0 
Query:    1 RIITELALHLCGSSTNTWCKVGGLKVYPSLPAASYNWEMLYADTG----KLFLHFNGRYKHVIAGFS--VPEKCNPSGHNHVNSFETL 82
            R++  LA+ LCGS  N WC++GG++V+P  PA SY +E+L   T     +LFLHF GR KH+I G    +P KC   G  H   F  L
Sbjct:  128 RMVPSLAIELCGSENNPWCQLGGVEVFPHPPAPSYEFELLNISTPTGRPRLFLHFQGRIKHIIPGMDLGIPLKCRNGGRLHKEGFMDL 215
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig672.14328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLX3_9PHAE9.690e-2054.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L183_9PHAE2.310e-1644.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig672contigH-elongata_contig672:2402..4312 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig672.14328.1mRNA_H-elongata_contig672.14328.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig672 2400..4312 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig672.14328.1 ID=prot_H-elongata_contig672.14328.1|Name=mRNA_H-elongata_contig672.14328.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
RIITELALHLCGSSTNTWCKVGGLKVYPSLPAASYNWEMLYADTGKLFLH
FNGRYKHVIAGFSVPEKCNPSGHNHVNSFETLD
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