prot_H-elongata_contig67160.14325.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67160.14325.1
Unique Nameprot_H-elongata_contig67160.14325.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
BLAST of mRNA_H-elongata_contig67160.14325.1 vs. uniprot
Match: A0A1Y1MJE9_PHOPY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MJE9_PHOPY)

HSP 1 Score: 55.1 bits (131), Expect = 4.110e-7
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   21 SRRTRHLDIKHHIVRDAIYGRVIHIEYVRSGEQHADALTKYVDVRTFE 68
            +RRT+H+DIKHH +RD +    IHI+Y+ S EQ AD LTK + +  FE
Sbjct:  930 TRRTKHIDIKHHYIRDCVESERIHIQYIPSNEQQADILTKSLSLSKFE 977          
BLAST of mRNA_H-elongata_contig67160.14325.1 vs. uniprot
Match: A0A0A9YPH4_LYGHE (Copia protein n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YPH4_LYGHE)

HSP 1 Score: 54.3 bits (129), Expect = 7.250e-7
Identity = 26/54 (48.15%), Postives = 40/54 (74.07%), Query Frame = 0
Query:   15 AKNRFSSRRTRHLDIKHHIVRDAIYGRVIHIEYVRSGEQHADALTKYVDVRTFE 68
            A+NR +S+R +H+DIKHH +R+ +   VI + YV + EQ+AD LTK +D ++FE
Sbjct:  281 ARNRENSKRIKHIDIKHHFIREKVDEGVIKLNYVSTSEQNADILTKGLDKQSFE 334          
BLAST of mRNA_H-elongata_contig67160.14325.1 vs. uniprot
Match: A0A392RX51_9FABA (Peroxidase 4-like (Fragment) n=2 Tax=Trifolium medium TaxID=97028 RepID=A0A392RX51_9FABA)

HSP 1 Score: 49.3 bits (116), Expect = 4.870e-6
Identity = 22/55 (40.00%), Postives = 36/55 (65.45%), Query Frame = 0
Query:   15 AKNRFSSRRTRHLDIKHHIVRDAIYGRVIHIEYVRSGEQHADALTKYVDVRTFEK 69
            +KN     RT+H+DI+HH +RD +  +++ +E+V + EQ +D  TK +D   FEK
Sbjct:   28 SKNPIQHSRTKHIDIRHHFIRDFVEEKIVTLEHVATEEQLSDIFTKALDANQFEK 82          
BLAST of mRNA_H-elongata_contig67160.14325.1 vs. uniprot
Match: A0A392LX79_9FABA (Gag-pol polyprotein n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392LX79_9FABA)

HSP 1 Score: 52.0 bits (123), Expect = 4.970e-6
Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 0
Query:   15 AKNRFSSRRTRHLDIKHHIVRDAIYGRVIHIEYVRSGEQHADALTKYVDVRTFEK 69
            +KN     RT+H+DI+HH +RD +   V+ +E+V + EQ AD  TK VD   FEK
Sbjct:  591 SKNPIQHSRTKHIDIRHHFIRDLVEENVVTLEHVSTDEQLADIFTKAVDANQFEK 645          
BLAST of mRNA_H-elongata_contig67160.14325.1 vs. uniprot
Match: A0A2K3P4Z0_TRIPR (Retrotransposon-related protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3P4Z0_TRIPR)

HSP 1 Score: 51.6 bits (122), Expect = 6.910e-6
Identity = 23/55 (41.82%), Postives = 36/55 (65.45%), Query Frame = 0
Query:   15 AKNRFSSRRTRHLDIKHHIVRDAIYGRVIHIEYVRSGEQHADALTKYVDVRTFEK 69
            +KN     RT+H+DI+HH +RD +  +++ +E++ S EQ AD  TK +D   FEK
Sbjct: 1141 SKNPIQHSRTKHIDIRHHFIRDLVEEKIVTLEHIASEEQLADIFTKALDANQFEK 1195          
BLAST of mRNA_H-elongata_contig67160.14325.1 vs. uniprot
Match: A0A6H5H5Y6_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5H5Y6_9HEMI)

HSP 1 Score: 48.5 bits (114), Expect = 8.170e-6
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   23 RTRHLDIKHHIVRDAIYGRVIHIEYVRSGEQHADALTKYVDVRTFE 68
            RT+H+D++HH VR+ I  + I +EY+ S E  AD+LTK +D   FE
Sbjct:   30 RTKHIDVRHHFVRERIQKKEIELEYIPSAEMVADSLTKPLDAEKFE 75          
BLAST of mRNA_H-elongata_contig67160.14325.1 vs. uniprot
Match: A0A2K3K827_TRIPR (Gag-pol polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3K827_TRIPR)

HSP 1 Score: 48.5 bits (114), Expect = 1.020e-5
Identity = 23/55 (41.82%), Postives = 35/55 (63.64%), Query Frame = 0
Query:   15 AKNRFSSRRTRHLDIKHHIVRDAIYGRVIHIEYVRSGEQHADALTKYVDVRTFEK 69
            +KN     RT+H+DI+HH +RD +   V+ +E++ + EQ AD  TK +D   FEK
Sbjct:   22 SKNPIQHSRTKHIDIRHHFIRDLVEEGVVKLEHIATEEQLADIFTKALDAVQFEK 76          
BLAST of mRNA_H-elongata_contig67160.14325.1 vs. uniprot
Match: A0A392MTL3_9FABA (Putative gag-pol polyprotein n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MTL3_9FABA)

HSP 1 Score: 50.4 bits (119), Expect = 1.620e-5
Identity = 23/55 (41.82%), Postives = 37/55 (67.27%), Query Frame = 0
Query:   15 AKNRFSSRRTRHLDIKHHIVRDAIYGRVIHIEYVRSGEQHADALTKYVDVRTFEK 69
            +KN     RT+H+DI+HH +RD +  +V+ +E++ + EQ AD LTK +D   FE+
Sbjct:  236 SKNPVQHSRTKHIDIRHHYIRDLVEDKVVTLEHIATEEQLADILTKALDANRFEE 290          
BLAST of mRNA_H-elongata_contig67160.14325.1 vs. uniprot
Match: A0A5A7SGW5_CUCME (Copia protein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7SGW5_CUCME)

HSP 1 Score: 50.4 bits (119), Expect = 1.680e-5
Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   15 AKNRFSSRRTRHLDIKHHIVRDAIYGRVIHIEYVRSGEQHADALTKYVDVRTFE 68
            +KN     RT+H+DIKHH +R+ I G V+ +++VRS  Q  D  TK +DV +FE
Sbjct:  107 SKNPVQHSRTKHIDIKHHFIRELIEGEVVVLKHVRSSLQLVDIFTKPLDVSSFE 160          
BLAST of mRNA_H-elongata_contig67160.14325.1 vs. uniprot
Match: A0A5D3DEL4_CUCME (Integrase catalytic domain-containing protein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3DEL4_CUCME)

HSP 1 Score: 50.4 bits (119), Expect = 1.760e-5
Identity = 24/54 (44.44%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   15 AKNRFSSRRTRHLDIKHHIVRDAIYGRVIHIEYVRSGEQHADALTKYVDVRTFE 68
            +KN     RT+H+DI+HH +R+ +   +I +E+V+S  Q AD  TK +DV TFE
Sbjct:  860 SKNPVQHSRTKHIDIRHHFIRELVEANIISLEHVQSAFQLADIFTKPLDVATFE 913          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67160.14325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1MJE9_PHOPY4.110e-752.08Integrase catalytic domain-containing protein (Fra... [more]
A0A0A9YPH4_LYGHE7.250e-748.15Copia protein n=1 Tax=Lygus hesperus TaxID=30085 R... [more]
A0A392RX51_9FABA4.870e-640.00Peroxidase 4-like (Fragment) n=2 Tax=Trifolium med... [more]
A0A392LX79_9FABA4.970e-645.45Gag-pol polyprotein n=1 Tax=Trifolium medium TaxID... [more]
A0A2K3P4Z0_TRIPR6.910e-641.82Retrotransposon-related protein (Fragment) n=1 Tax... [more]
A0A6H5H5Y6_9HEMI8.170e-647.83Uncharacterized protein (Fragment) n=1 Tax=Nesidio... [more]
A0A2K3K827_TRIPR1.020e-541.82Gag-pol polyprotein (Fragment) n=1 Tax=Trifolium p... [more]
A0A392MTL3_9FABA1.620e-541.82Putative gag-pol polyprotein n=1 Tax=Trifolium med... [more]
A0A5A7SGW5_CUCME1.680e-546.30Copia protein n=1 Tax=Cucumis melo var. makuwa Tax... [more]
A0A5D3DEL4_CUCME1.760e-544.44Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67160contigH-elongata_contig67160:926..1135 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67160.14325.1mRNA_H-elongata_contig67160.14325.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67160 926..1135 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67160.14325.1 ID=prot_H-elongata_contig67160.14325.1|Name=mRNA_H-elongata_contig67160.14325.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
PLRYTRTTKARSRWAKNRFSSRRTRHLDIKHHIVRDAIYGRVIHIEYVRS
GEQHADALTKYVDVRTFEKH
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