prot_H-elongata_contig67097.14319.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig67097.14319.1 vs. uniprot
Match: D7FNN0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNN0_ECTSI) HSP 1 Score: 346 bits (887), Expect = 4.510e-110 Identity = 199/420 (47.38%), Postives = 257/420 (61.19%), Query Frame = 0
Query: 1 QIRTVCKD-PKIQRLAEAKIRNRAEACQMEELRKAVGFRRVIDEISESGKPVISHNGLMDIFHTHDKFVGPIPADFEEGTRAMHAFLPSLFDSKVVMSKAIAEGMSLPCTTLGEAFTWLRQKFAAV----------TDKGSEELSTVTDEALEKNGEA-------GEAD---------------------------RSRAKEQD----KRSMQAWYASFAPGFEERYTAQAREHEAGYDAYLTGCCFAAAAMLGLGVGVEEIKGISSGGEIPEALAPVSNTLPLYRVLAGQRMSLPGPTPPPDFSCYLHVSGFPPAAKTDDIMRPVKAVSGCESTWFHWIDDTSGVAECPSAEAALDLIRSAASG---------------STMDKAGENAVDPKKLRLSDMKVVQLNPSLLEGDEDNGPE 356
+IRTVCKD P+ EAK+R +A Q+ +LR+AVGFRRV+DEIS++GKPVI HNGL+D+ HTHDKFVGPIP D ++GTRA+H+ LP LFDSKVVM+KA+A GM LP T LGEA WLR+K+ A + G E +E + +G A GEA+ + A E+D +R+ + W A APGFEERY REHEAG+DAYLTGCCFAAAA +GLGVG++E+K ++SG E P AL N LPLY+V+ GQ++ LPGP P D S Y+HVSGFP AA+TD ++ +KAV GC +WFHW+DDTSGV +C SAE A L+R+AA+ + D DP +L L D+K+VQ+ +LL G PE
Sbjct: 266 EIRTVCKDDPEKHAEEEAKLRADEQARQLGDLRRAVGFRRVVDEISKAGKPVICHNGLLDLLHTHDKFVGPIPVDMDDGTRALHSLLPRLFDSKVVMAKAMAAGMKLPRTVLGEAHQWLREKYPAPXXXXXXLEEGAEAGMEPAEGAAEEGQQVDGTAVVATTSGGEANGDSKTNGEGXXXXXXXXXAVPPVEAGAEAAASERDVEALERARRGWDAVLAPGFEERYKDGGREHEAGFDAYLTGCCFAAAATVGLGVGLDELKRMASGEETPAALGSAQNVLPLYKVVGGQQVCLPGPAPKVDLSRYVHVSGFPSAARTDAVLASIKAVDGCVDSWFHWMDDTSGVVDCTSAEGAEALLRAAAAXXXXXXXXXXXXXGTPAAGDGGSGEEADPCRLSLGDLKLVQMEHALLNGGGRGAPE 685
BLAST of mRNA_H-elongata_contig67097.14319.1 vs. uniprot
Match: A0A087Y4R9_POEFO (Poly(A)-specific ribonuclease PARN n=14 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A087Y4R9_POEFO) HSP 1 Score: 91.3 bits (225), Expect = 2.330e-16 Identity = 83/269 (30.86%), Postives = 120/269 (44.61%), Query Frame = 0
Query: 27 QMEELRKAVGFRRVIDEISESGKPVISHNGLMDIFHTHDKFVGPIPADFEEGTRAMHAFLPSLFDSKVVMSKAIAEGMSLPCTTLGEAFTWLRQKFAAVTDKGSEELSTVTDEALEKNGEAGEADRSRAKEQDKRSMQAWYASFAPGFEERYTAQAREHEAGYDAYLTGCCFAAAAMLGLGVGVEEIKGISSGGEIPEALAPVSNTLPLYRVLAGQRMSLPGPTPPPDFSCYLHVSGFPPAAKTDDIMRPVKAVSGCESTWFHWIDDTS 295
+ EEL AVGF RVI+ IS+SGK V+ HN L+D+ HT +F P+P D ++ P L D+K++ S T E ++ + LEK + KE + Q A P ++ TAQ + HEAGYDAY+TG CF + A + I IS ++ E P N L L R++ +++ GP P L+V+ FP KT D+ + A + +W IDDTS
Sbjct: 260 EQEELNNAVGFSRVINAISKSGKLVVGHNMLLDVMHTIHQFYCPLPEDLQDFKEVAMCVFPRLLDTKLMAS----------------------------TQPFKELINNTSLAELEK----------QVKETPFKPPQVETAEGFPSYD---TAQEQLHEAGYDAYITGLCFISMANHLGSFLMPPISYISPRSKLVE---PFFNKLFLMRIIDIPYLNITGPDLQPKRDHVLYVT-FPKEWKTSDLYQLFSAFGNIQVSW---IDDTS 480
BLAST of mRNA_H-elongata_contig67097.14319.1 vs. uniprot
Match: S4RGQ4_PETMA (Poly(A)-specific ribonuclease PARN n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4RGQ4_PETMA) HSP 1 Score: 90.1 bits (222), Expect = 4.450e-16 Identity = 84/274 (30.66%), Postives = 119/274 (43.43%), Query Frame = 0
Query: 28 MEELRKAVGFRRVIDEISESGKPVISHNGLMDIFHTHDKFVGPIPADFEEGTRAMHAFLPSLFDSKVVMSKAIAEGMSLPCTTLGEAFTWLRQ---KFAAVTDKGSEELSTVTDEALEKNGEAGEADRSRAKEQDKRSMQAWYASFAPGFEERYTAQAREHEAGYDAYLTGCCFAAAAMLGLGVGVEEIKGISSGGEIP---EALAPVSNTLPLYRVLAGQRMSLPGPTPPPDFSCYLHVSGFPPAAKTDDIMRPVKAVSGCESTWFHWIDDTS 295
+EEL AVGF RVI IS+SGK ++ HN L+D+ HT +F P+P +E + P L D+K++ S + + + TTL + L + K AV A GF TA + HEAGYDAY+TG CFA+ A LG ++ K IP + P N L L R++ ++L GP P+ LHV+ FP +T D+ + A + +W IDDTS
Sbjct: 259 LEELEDAVGFTRVIQAISKSGKLLVGHNMLLDVMHTVHQFYSPLPESLDEFKELTNCVFPRLLDTKLMSSTHPFKEV-IQFTTLADLHRRLSEAPFKMPAVAS-------------------------------------------AEGFPAYSTAVEQLHEAGYDAYITGLCFASMANY-LGSFMDPPK-----SHIPARSHLIEPFVNKLFLMRIIDIPYLNLTGPDLKPNRDHVLHVT-FPKEWRTSDLHQLFSAFGNIQVSW---IDDTS 478
BLAST of mRNA_H-elongata_contig67097.14319.1 vs. uniprot
Match: Q28DE5_XENTR (Novel protein similar to poly(A)-specific ribonuclease (Deadenylation nuclease) (Fragment) n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=Q28DE5_XENTR) HSP 1 Score: 89.4 bits (220), Expect = 5.400e-16 Identity = 87/273 (31.87%), Postives = 121/273 (44.32%), Query Frame = 0
Query: 24 EACQMEELRKAVGFRRVIDEISESGKPVISHNGLMDIFHTHDKFVGPIPADFEEGTRAMHAFLPSLFDSKVVMSKAIAEGMSLPCTTLGEAFTWLRQKFAAVTDKGSEELSTVTDEALEKNGEAGEADRSRAKEQDKRSMQAWYASFAPGFEERYTAQAREHEAGYDAYLTGCCFAAAAMLGLGVGVEEIKG-ISSGGEIPEALAPVSNTLPLYRVLAGQRMSLPGPTPPPDFSCYLHVSGFPPAAKTDDIMRPVKAVSGCESTWFHWIDDTS 295
+A + EEL AVGF R+I IS SGK V+ HN L+DI HT +F +P + E + P + D+K++ S T+ E + + LEK R KE + + A GF TA + HEAGYDAY+TG CF + A LG + KG +SS +I + P N L L R++ ++L GP P LHV+ FP KT D+ + A + +W IDDTS
Sbjct: 48 QAKEREELDDAVGFSRIIQAISSSGKLVVGHNMLLDIMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLMAS----------------------------TNPFKEIIYNTSLAELEK----------RLKEAPFKPPKV---DSAEGFPSYNTASEQLHEAGYDAYITGLCFISMANY-LGSFLSPPKGYVSSRSKI---IRPFFNKLFLMRIMDIPYLNLEGPDLQPKRDNVLHVA-FPKEWKTSDLYQLFSAFGNIQVSW---IDDTS 271
BLAST of mRNA_H-elongata_contig67097.14319.1 vs. uniprot
Match: A0A199VE10_ANACO (Poly(A)-specific ribonuclease PARN n=4 Tax=Ananas comosus TaxID=4615 RepID=A0A199VE10_ANACO) HSP 1 Score: 87.0 bits (214), Expect = 6.070e-15 Identity = 86/294 (29.25%), Postives = 130/294 (44.22%), Query Frame = 0
Query: 31 LRKAVGFRRVIDEISESGKPVISHNGLMDIFHTHDKFVGPIPADFEEGTRAMHAFLPSLFDSKVVM--SKAIAEGMSLPCTTLGEAFTWLRQKFAAVTDKGSEELSTVTDEALE-KNGEAGEADRSRAKEQDKRSMQAWYASFAPGFEERYTAQAREHEAGYDAYLTGCCFAAAAMLGLGVGVEEIKGISSGGEIPEALAPVSNTL-------PLYRVLAGQRMSLPGPT---PPPDFSCYLHVSGFPPAAKTDDIMRPVKAVSGCES-TWFHWIDDTSGVAECPSAEAALDLI 310
+R AVGFR VID ++ K ++ HN L+DI H ++KF+GP+P+ E A+H P + D+K ++ S+ I M +L AF+ L S+ T + +E ++ EAG + F+ G +HEAGYDA++TGC FA LGV E + ++ +I + LAP N L + + G PG PP FS V GFP K D+ + V G +S T +ID T+ + + E D +
Sbjct: 332 VRSAVGFRHVIDLLASEQKLIVGHNCLLDIAHIYNKFIGPLPSSMAEFVLAVHDIFPYVVDTKHLLNSSQGIQYFMKKKSKSLSSAFSLL----CPAVSSPSKNFGTSSHVKVEVESDEAGSS------------------CFSSG---------AKHEAGYDAFMTGCVFAQICCH-LGVNFELLSPSANLTKI-DRLAPYINLLYPAWNSGTVINLSTGTEKPEPGYKRNYPPVVFSKVTLVWGFPSKLKPKDLKESICKVFGPDSVTSIFFIDSTAALIQLSKEEFVNDFL 592
BLAST of mRNA_H-elongata_contig67097.14319.1 vs. uniprot
Match: PARN_XENLA (Poly(A)-specific ribonuclease PARN n=12 Tax=Xenopus TaxID=8353 RepID=PARN_XENLA) HSP 1 Score: 85.1 bits (209), Expect = 2.420e-14 Identity = 84/273 (30.77%), Postives = 120/273 (43.96%), Query Frame = 0
Query: 24 EACQMEELRKAVGFRRVIDEISESGKPVISHNGLMDIFHTHDKFVGPIPADFEEGTRAMHAFLPSLFDSKVVMSKAIAEGMSLPCTTLGEAFTWLRQKFAAVTDKGSEELSTVTDEALEKNGEAGEADRSRAKEQDKRSMQAWYASFAPGFEERYTAQAREHEAGYDAYLTGCCFAAAAMLGLGVGVEEIKG-ISSGGEIPEALAPVSNTLPLYRVLAGQRMSLPGPTPPPDFSCYLHVSGFPPAAKTDDIMRPVKAVSGCESTWFHWIDDTS 295
+A + EEL AVGF R+I IS SGK V+ HN L+D+ HT +F +P + E + P + D+K++ S T+ E + + LEK R KE + + A GF+ TA + HEAGYDAY+TG CF + A LG + K +S +I + P N L L R++ ++L GP P LHV+ FP KT D+ + A + +W IDDTS
Sbjct: 256 QAKEREELDDAVGFSRIIQAISSSGKLVVGHNMLLDVMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLMAS----------------------------TNPFKEIIYNTSLAELEK----------RLKEAPFKPPKV---DSAEGFQSYNTASEQLHEAGYDAYITGLCFISMANY-LGSFLSPPKDYVSCRSKI---VRPFFNKLFLMRIMDIPYLNLEGPDLQPKRDNVLHVT-FPKEWKTSDLYQLFSAFGNIQVSW---IDDTS 479
BLAST of mRNA_H-elongata_contig67097.14319.1 vs. uniprot
Match: A0A803QCH9_CANSA (Uncharacterized protein n=4 Tax=Cannabis sativa TaxID=3483 RepID=A0A803QCH9_CANSA) HSP 1 Score: 83.6 bits (205), Expect = 8.290e-14 Identity = 55/170 (32.35%), Postives = 82/170 (48.24%), Query Frame = 0
Query: 34 AVGFRRVIDEISESGKPVISHNGLMDIFHTHDKFVGPIPADFEEGTRAMHAFLPSLFDSKVVMSK--AIAEGMSLPCTTLGEAFTWLRQKFAAVTDKGSEELSTVTDEALEKNGEAGEADRSRAKEQDKRSMQAWYASFAPGFEERYTAQAREHEAGYDAYLTGCCFAAA 201
A+GFR VID +S K ++ HN +DI H H+KFVGP+P + E+ ++H + P + D+K++++ + + M T+L AFT + A S V EA + D SR +W A +HEAGYDA++TGC FA A
Sbjct: 316 AIGFRHVIDLLSSEKKLIVGHNCFLDIAHVHNKFVGPLPLEAEDFVASIHKYFPHIIDTKILLNTHPILQQRMKKSKTSLSSAFTMICPHIALSVSSAVASDSYVKVEA--------QVDDSRCS--------SWNAG-------------GKHEAGYDAFMTGCIFAQA 456
BLAST of mRNA_H-elongata_contig67097.14319.1 vs. uniprot
Match: A0A2G5C437_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5C437_AQUCA) HSP 1 Score: 83.6 bits (205), Expect = 8.390e-14 Identity = 62/195 (31.79%), Postives = 93/195 (47.69%), Query Frame = 0
Query: 14 LAEAKIRNRAEACQMEELRKAVGFRRVIDEISESGKPVISHNGLMDIFHTHDKFVGPIPADFEEGTRAMHAFLPSLFDSKVVMS--KAIAEGMSLPCTTLGEAFTWLRQKFAA-----VTDKGSEELSTVTDEALEKNGEAGEADRSRAKEQDKRSMQAWYASFAPGFEERYTAQAREHEAGYDAYLTGCCFAAA 201
L EA+ R EA +M+ ++ AVGFR VID + K V+ HN +DI H H+KF+GP+P+ EE ++H P + D+K ++ K + M T+L +AF +L +F++ V ++ S E DE N +G +HEAGYDA++TGC FA A
Sbjct: 312 LKEARDTKRREA-EMK-VKNAVGFRHVIDLLLSEQKLVVGHNCFLDIAHIHNKFLGPLPSKIEEFASSIHKHFPHIIDTKYLLKTDKVMQFMMKKKSTSLSKAFAYLCPQFSSLSGSSVVNRQSVEFEVQVDELRSSNWNSG----------------------------------AKHEAGYDAFMTGCVFAQA 470
BLAST of mRNA_H-elongata_contig67097.14319.1 vs. uniprot
Match: A0A822IC25_9NEOB (Poly(A)-specific ribonuclease PARN (Fragment) n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822IC25_9NEOB) HSP 1 Score: 82.4 bits (202), Expect = 1.410e-13 Identity = 81/273 (29.67%), Postives = 121/273 (44.32%), Query Frame = 0
Query: 24 EACQMEELRKAVGFRRVIDEISESGKPVISHNGLMDIFHTHDKFVGPIPADFEEGTRAMHAFLPSLFDSKVVMSKAIAEGMSLPCTTLGEAFTWLRQKFAAVTDKGSEELSTVTDEALEKNGEAGEADRSRAKEQDKRSMQAWYASFAPGFEERYTAQAREHEAGYDAYLTGCCFAAAA-MLGLGVGVEEIKGISSGGEIPEALAPVSNTLPLYRVLAGQRMSLPGPTPPPDFSCYLHVSGFPPAAKTDDIMRPVKAVSGCESTWFHWIDDTS 295
+A + E+L AVGF RVI IS SGK V+ HN ++D+ HT ++F +P D EE R + LP + D+K++ S Q F A+ +S LEK R + + + A P ++ T+ + HEAGYDAY+TG CF + A LG + + + ++P N L L R+ ++L GP P LHV+ FP K+ D+ + A + +W IDDTS
Sbjct: 234 KAKEQEDLNDAVGFSRVIQAISSSGKLVVGHNMMLDVMHTINQFYCQLPVDLEEFKRLTNCVLPRVLDTKLMAST---------------------QPFKAI-------ISHTVLAELEK----------RLQMAPFKPPKVESAEDFPSYD---TSVGQLHEAGYDAYITGLCFISMADYLGSFLNPPQTHVTVQS----DVISPFFNKLFLMRITDIPYLNLDGPDLLPKRDNVLHVT-FPKEWKSSDLYQLFNAFGKIQVSW---IDDTS 457
BLAST of mRNA_H-elongata_contig67097.14319.1 vs. uniprot
Match: A0A4Y7ITR0_PAPSO (Uncharacterized protein n=1 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7ITR0_PAPSO) HSP 1 Score: 79.0 bits (193), Expect = 1.720e-13 Identity = 58/180 (32.22%), Postives = 87/180 (48.33%), Query Frame = 0
Query: 31 LRKAVGFRRVIDEISESGKPVISHNGLMDIFHTHDKFVGPIPADFEEGTRAMHAFLPSLFDSKVVMSK--AIAEGMSLPCTTLGEAFTWLRQKFAAVTDKGSEELSTVTDEALEKNGEAGEADRSRAKEQDKRSMQAWYASFAPGFEERYTAQAREHEAGYDAYLTGCCFA-AAAMLGLG 207
L+ A GFRRVID +S K ++ HN +D+ H + KF+GP+P +E ++H P + D+K++++ AI M T+L AF L + A SE ++V L + + D RS W + HEAGYDA++TGC FA A + LG+G
Sbjct: 16 LKAATGFRRVIDLLSSEQKLLVGHNSFLDMTHIYSKFIGPLPPTIDEYISSVHKVFPYIIDTKLLLNTDCAIQRLMKKQSTSLSSAFALLCPQIAL----SSEGSASVNQPGL----------KIEVQVDDMRSFN-WNSG-------------ANHEAGYDAFMTGCIFAQACSHLGIG 167 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67097.14319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig67097.14319.1 ID=prot_H-elongata_contig67097.14319.1|Name=mRNA_H-elongata_contig67097.14319.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=365bpback to top |