prot_H-elongata_contig67075.14316.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67075.14316.1
Unique Nameprot_H-elongata_contig67075.14316.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length115
Homology
BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: D8LNX4_ECTSI (ATP-dependent protease peptidase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNX4_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 1.400e-52
Identity = 91/109 (83.49%), Postives = 99/109 (90.83%), Query Frame = 0
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILDAEEEE 109
            GQL NACVALAKDWRTDKYLRRLE+VVLVADSK SLKVTGLGDVLAPNGGV+AVGSGQPYALAAARAL  Q  LSAEEVAR++MEIA++LCVYTN +FT+  LD EEEE
Sbjct:  101 GQLMNACVALAKDWRTDKYLRRLEAVVLVADSKFSLKVTGLGDVLAPNGGVIAVGSGQPYALAAARALSGQEDLSAEEVARKSMEIASELCVYTNNHFTMHSLDVEEEE 209          
BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: A0A3M1JZ37_9PROT (ATP-dependent protease subunit HslV n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JZ37_9PROT)

HSP 1 Score: 136 bits (343), Expect = 1.550e-38
Identity = 70/106 (66.04%), Postives = 86/106 (81.13%), Query Frame = 0
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILDAE 106
            GQL  ACV LAKDWRTD+YLRRLE+++ VAD   SL +TG GDVL P+ G++A+GSG  YALAAARAL+ QN L AE +AR+AMEIAAD+CVYTN N T+E+L+ E
Sbjct:   80 GQLVRACVELAKDWRTDRYLRRLEAMMAVADRSTSLMLTGTGDVLEPDDGIIAIGSGGNYALAAARALYDQN-LDAEAIARRAMEIAADICVYTNNNLTIEVLETE 184          
BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: M2XNT1_GALSU (ATP-dependent HslUV protease, peptidase subunit HslV isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XNT1_GALSU)

HSP 1 Score: 137 bits (344), Expect = 3.170e-38
Identity = 66/104 (63.46%), Postives = 88/104 (84.62%), Query Frame = 0
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILD 104
            GQL  ACV+LAKDWRTD+YLRRL++++LV+D+ +SL +TG GDVL P GGVV +GSG P+A+AAAR+L   + LSAEE+A+ +M+IAAD+C+YTNA F VEI+D
Sbjct:  102 GQLLRACVSLAKDWRTDRYLRRLDALLLVSDASISLTLTGNGDVLEPEGGVVGIGSGGPFAVAAARSLLQHSTLSAEEIAKNSMKIAADMCIYTNAEFIVEIID 205          
BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: A0A1E5Q488_9PROT (ATP-dependent protease subunit HslV n=1 Tax=Magnetovibrio blakemorei TaxID=28181 RepID=A0A1E5Q488_9PROT)

HSP 1 Score: 135 bits (340), Expect = 4.670e-38
Identity = 69/102 (67.65%), Postives = 85/102 (83.33%), Query Frame = 0
Query:    2 QLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEIL 103
            QL  ACV LAKDWRTD+YLR+LE+++LVAD  +SL +TG GDVL P+ GV+A+GSG  YALAAAR L  Q+ LSAE+VAR+AMEIAAD+CV+TN NFT+E L
Sbjct:   85 QLTRACVELAKDWRTDRYLRKLEAMMLVADKDVSLVLTGTGDVLEPDDGVIAIGSGGNYALAAARGLAGQDNLSAEQVARRAMEIAADICVFTNTNFTIETL 186          
BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: A0A285SXX0_9HYPH (ATP-dependent protease subunit HslV n=6 Tax=Stappia TaxID=152161 RepID=A0A285SXX0_9HYPH)

HSP 1 Score: 134 bits (338), Expect = 9.110e-38
Identity = 70/106 (66.04%), Postives = 84/106 (79.25%), Query Frame = 0
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILDAE 106
            GQL  ACV LAKDWRTD+YLRRLE+++LVAD  +SL +TG GDVL P GGV+ +GSG  YALAAARAL A   + AE +AR+AM IAAD+CVYTN N T+E LDA+
Sbjct:   81 GQLMRACVELAKDWRTDRYLRRLEAMMLVADKSVSLVLTGTGDVLEPEGGVMGIGSGGNYALAAARAL-ADTDMDAETIARRAMAIAADICVYTNGNLTIETLDAD 185          
BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: A0A6N6VI23_9HYPH (ATP-dependent protease subunit HslV n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VI23_9HYPH)

HSP 1 Score: 134 bits (338), Expect = 9.640e-38
Identity = 70/105 (66.67%), Postives = 88/105 (83.81%), Query Frame = 0
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILDA 105
            GQL  ACV LAKDWRTD++LRRLE++++VAD+ +SL +TG GDVL P GG+V +GSG  YALAAARAL A   LSAEE+AR+A++IA+++CVYTN N TVEILDA
Sbjct:   83 GQLTRACVELAKDWRTDRFLRRLEALMIVADAHVSLVLTGNGDVLEPEGGIVGIGSGGNYALAAARAL-ADTELSAEEIARKALKIASEICVYTNNNLTVEILDA 186          
BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: A0A1H2IQA3_9HYPH (ATP-dependent protease subunit HslV n=3 Tax=Stappia TaxID=152161 RepID=A0A1H2IQA3_9HYPH)

HSP 1 Score: 134 bits (337), Expect = 1.330e-37
Identity = 69/105 (65.71%), Postives = 87/105 (82.86%), Query Frame = 0
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILDA 105
            GQL  ACV LAKDWRTD+YLRRLE+++LVADS +SL +TG GDVL P GG++ +GSG  YALAAARAL A + L AEEVAR+AM++AA++CVYTN N T+E L++
Sbjct:   81 GQLMRACVELAKDWRTDRYLRRLEAMMLVADSSISLVLTGTGDVLEPEGGIMGIGSGGNYALAAARAL-ADSDLDAEEVARKAMKVAAEICVYTNENLTIESLES 184          
BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: A0A4R3JG61_9PROT (ATP-dependent protease subunit HslV n=2 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3JG61_9PROT)

HSP 1 Score: 133 bits (334), Expect = 3.570e-37
Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = 0
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILD 104
            GQL  ACV LAKDWRTD+YLR+LE+++ VAD ++SL +TG GDVL P+ GV+A+GSG  YALAAARAL  Q  L AE +AR+AM IAAD+CVYTN NFT+E +D
Sbjct:   80 GQLTRACVELAKDWRTDRYLRKLEAMMTVADKEVSLVLTGTGDVLEPDDGVMAIGSGGNYALAAARALVGQPDLGAEVIARRAMAIAADICVYTNTNFTIESID 183          
BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: K3WU52_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU52_GLOUD)

HSP 1 Score: 133 bits (335), Expect = 4.680e-37
Identity = 67/110 (60.91%), Postives = 86/110 (78.18%), Query Frame = 0
Query:    1 GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILDAEEEEE 110
            GQL  +CV LAK WRTDKYLRRLE++++V+DSK S  +TG GDV+ P+ G++ +GSG  YALAAARAL  Q  L AEE+ R+AM+IAAD+CVYTN NF VE+LD   E++
Sbjct:   96 GQLARSCVELAKAWRTDKYLRRLEAILIVSDSKQSYTLTGNGDVIEPHDGIIGIGSGGTYALAAARALIDQPNLDAEEIGRKAMQIAADICVYTNHNFVVEVLDESTEKK 205          
BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Match: UPI00145F6AD7 (ATP-dependent protease subunit HslV n=1 Tax=Chelativorans sp. ZYF759 TaxID=2692213 RepID=UPI00145F6AD7)

HSP 1 Score: 132 bits (333), Expect = 4.780e-37
Identity = 70/105 (66.67%), Postives = 87/105 (82.86%), Query Frame = 0
Query:    2 QLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGGVVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTVEILDAE 106
            QL  ACV LAKDWRTD+YLRRLE+++LVAD +++L +TG GDVL P  GV+A+GSG  YALAAARAL A+  + AEEVAR+AM+IAA++CVYTN N T+E LDAE
Sbjct:   79 QLMRACVELAKDWRTDRYLRRLEAMMLVADKRVTLALTGTGDVLEPEHGVMAIGSGGNYALAAARAL-AETDMDAEEVARRAMKIAAEICVYTNPNVTLESLDAE 182          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67075.14316.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNX4_ECTSI1.400e-5283.49ATP-dependent protease peptidase subunit n=2 Tax=E... [more]
A0A3M1JZ37_9PROT1.550e-3866.04ATP-dependent protease subunit HslV n=1 Tax=Alphap... [more]
M2XNT1_GALSU3.170e-3863.46ATP-dependent HslUV protease, peptidase subunit Hs... [more]
A0A1E5Q488_9PROT4.670e-3867.65ATP-dependent protease subunit HslV n=1 Tax=Magnet... [more]
A0A285SXX0_9HYPH9.110e-3866.04ATP-dependent protease subunit HslV n=6 Tax=Stappi... [more]
A0A6N6VI23_9HYPH9.640e-3866.67ATP-dependent protease subunit HslV n=1 Tax=Parvib... [more]
A0A1H2IQA3_9HYPH1.330e-3765.71ATP-dependent protease subunit HslV n=3 Tax=Stappi... [more]
A0A4R3JG61_9PROT3.570e-3765.38ATP-dependent protease subunit HslV n=2 Tax=Varuna... [more]
K3WU52_GLOUD4.680e-3760.91Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
UPI00145F6AD74.780e-3766.67ATP-dependent protease subunit HslV n=1 Tax=Chelat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 10..102
e-value: 3.0E-6
score: 26.9
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 1..104
e-value: 3.7E-31
score: 110.6
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 2..103
IPR022281ATP-dependent protease, HslV subunitPANTHERPTHR32194FAMILY NOT NAMEDcoord: 1..109
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 1..103
score: 27.061

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67075contigH-elongata_contig67075:1227..3292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67075.14316.1mRNA_H-elongata_contig67075.14316.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67075 1227..3292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67075.14316.1 ID=prot_H-elongata_contig67075.14316.1|Name=mRNA_H-elongata_contig67075.14316.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp
GQLQNACVALAKDWRTDKYLRRLESVVLVADSKMSLKVTGLGDVLAPNGG
VVAVGSGQPYALAAARALWAQNALSAEEVARQAMEIAADLCVYTNANFTV
EILDAEEEEEGCKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR022281ATP-dep_Prtase_HsIV_su
IPR023333Proteasome_suB-type