prot_H-elongata_contig67005.14307.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67005.14307.1
Unique Nameprot_H-elongata_contig67005.14307.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length177
Homology
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A4S4K4A0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K4A0_9AGAM)

HSP 1 Score: 125 bits (315), Expect = 3.430e-33
Identity = 63/162 (38.89%), Postives = 96/162 (59.26%), Query Frame = 0
Query:   16 FPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVTK-TSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR 176
            F ++DLG  S+ LG  + RD++   L+  Q QYI  + ERF ++  T++   +     LSK+ +P    E+  M+ +PYR++VGALM+ A  TRPDIS+A   LA+F+ NPGP HW+AA+   +YL  T+D+ +TY   P      + +  AD+G   D  R
Sbjct:   22 FKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYITDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRR 183          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A4S4LBP1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LBP1_9AGAM)

HSP 1 Score: 127 bits (318), Expect = 4.730e-32
Identity = 66/176 (37.50%), Postives = 105/176 (59.66%), Query Frame = 0
Query:    3 RDEEQAVRD-LCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVTK-TSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR 176
            +D++  V++ L   F ++DLG  S+ LG  + RD++   L+  Q QYI  + ERF ++  T++   +     LSK+ +P    E+  M+ +PYR++VGALM+ A  TRPDIS+A   LA+F+ NPGP+HW+AA+   +YL  T+D+ +TY   P      + +  AD+G   D  R
Sbjct:  148 KDQDLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRR 323          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A4S4L7S0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4L7S0_9AGAM)

HSP 1 Score: 125 bits (313), Expect = 1.360e-31
Identity = 63/162 (38.89%), Postives = 96/162 (59.26%), Query Frame = 0
Query:   16 FPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVTK-TSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR 176
            F ++DLG  S+ LG  + RD++   L+  Q QYI  + ERF ++  T++   +     LSK+ +P    E+  M+ +PYR++VGALM+ A  TRPDIS+A   LA+F+ NPGP HW+AA+   +YL  T+D+ +TY   P      + +  AD+G   D  R
Sbjct:   22 FKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRR 183          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A6A3J8V8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J8V8_9STRA)

HSP 1 Score: 126 bits (316), Expect = 3.270e-31
Identity = 67/167 (40.12%), Postives = 97/167 (58.08%), Query Frame = 0
Query:   12 LCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGV--TKTSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR 176
            L S F + +LG+A + LG  I  D+   TL   Q +Y+  +  RF     K  + P   G K LSK+ SP TDAE E+MR  PY+ ++G+L++  T TRPD+++   QL++F +NPG  HW+AA + L+YL  T+D GI Y G   G   L  +  AD+G+  D  R
Sbjct:  126 LKSAFKMKELGEAKFILGMEIDHDRTTGTLMVKQTRYVDDVVNRFNQQDAKAVVNPCETGMK-LSKTQSPATDAEREDMRGKPYKSLIGSLLYITTCTRPDVAYIVTQLSQFLENPGQQHWKAAIRVLRYLKTTKDFGIVYSGN-NGKAVLEVYTDADWGSNLDGRR 290          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: E2LZP6_MONPE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LZP6_MONPE)

HSP 1 Score: 127 bits (319), Expect = 5.860e-31
Identity = 72/173 (41.62%), Postives = 95/173 (54.91%), Query Frame = 0
Query:    6 EQAVRDLCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVTK-----TSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPD 173
            ++ V  L   F + DLG  SY LG  ITR++    L   Q QYI    E FG+T      T + P++     LSKS SP T  EVEEM +IPY   VG+L++ ATMTRPDI++ A  LA+FN NPG  HW+A +  L+YL  T D+ + YG  P        +  +D G   D
Sbjct:  298 DEFVAKLSKHFKLRDLGATSYLLGVEITRNRPERKLYLSQRQYIINKLEEFGMTDCKPATTPMTPNLI----LSKSQSPQTPDEVEEMSEIPYISAVGSLLYLATMTRPDIAYTASVLARFNSNPGMDHWKAVKHVLRYLKGTMDIKLEYGPDPTTNDLFVTYCDSDLGGNRD 466          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A4S4K791_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K791_9AGAM)

HSP 1 Score: 125 bits (313), Expect = 9.810e-31
Identity = 63/162 (38.89%), Postives = 96/162 (59.26%), Query Frame = 0
Query:   16 FPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVTK-TSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR 176
            F ++DLG  S+ LG  + RD++   L+  Q QYI  + ERF ++  T++   +     LSK+ +P    E+  M+ +PYR++VGALM+ A  TRPDIS+A   LA+F+ NPGP HW+AA+   +YL  T+D+ +TY   P      + +  AD+G   D  R
Sbjct:  262 FKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRR 423          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A4V3X9G3_9AGAM (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4V3X9G3_9AGAM)

HSP 1 Score: 127 bits (318), Expect = 1.230e-30
Identity = 66/176 (37.50%), Postives = 105/176 (59.66%), Query Frame = 0
Query:    3 RDEEQAVRD-LCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVTK-TSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR 176
            +D++  V++ L   F ++DLG  S+ LG  + RD++   L+  Q QYI  + ERF ++  T++   +     LSK+ +P    E+  M+ +PYR++VGALM+ A  TRPDIS+A   LA+F+ NPGP+HW+AA+   +YL  T+D+ +TY   P      + +  AD+G   D  R
Sbjct:  629 KDQDLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRR 804          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A4S4KQD1_9AGAM (DOMON domain-containing protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KQD1_9AGAM)

HSP 1 Score: 125 bits (314), Expect = 1.900e-30
Identity = 63/162 (38.89%), Postives = 97/162 (59.88%), Query Frame = 0
Query:   16 FPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVTK-TSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR 176
            F ++DLG  S+ LG  + RD++   L+  Q QYI  + ERF ++  T++   +     LSK+ +P    E+  M+ +PYR++VGALM+ A  TRPDIS+A   LA+F+ NPGP+HW+AA+   +YL  T+D+ +TY   P      + +  AD+G   D  R
Sbjct:  239 FKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYTPDPHAPELFTTFSDADHGGDEDNRR 400          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: H3H572_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H572_PHYRM)

HSP 1 Score: 125 bits (313), Expect = 6.190e-30
Identity = 66/176 (37.50%), Postives = 101/176 (57.39%), Query Frame = 0
Query:    3 RDEEQAVRDLCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGV--TKTSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR 176
            ++ ++    L S F + +LG+  + LG  I  D+ A TL   Q +YI  +  RF     K  + P  +G K L+K  SP T+AE E+MR  PYR ++G L++  T TRPD+++   QL++F +NPG  HW+AA + L+YL  T++ GI Y G   G   + A+  AD+G+  D  R
Sbjct: 1043 KEIDEVKMALKSAFKMKELGEVKFILGMEIDHDRTASTLMIKQTRYIDDVTSRFNQQDAKAVVNPCESGMK-LTKMQSPTTNAEREDMRNKPYRSLIGCLLYITTCTRPDVAYIVTQLSRFLENPGQQHWKAAIRVLRYLKTTKEFGIVYNGN-NGKVAMEAYTDADWGSNLDDRR 1216          
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Match: A0A4S4KX50_9AGAM (Integrase catalytic domain-containing protein n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KX50_9AGAM)

HSP 1 Score: 124 bits (312), Expect = 8.300e-30
Identity = 63/162 (38.89%), Postives = 96/162 (59.26%), Query Frame = 0
Query:   16 FPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQTMAERFGVTK-TSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGALMWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGKPGGGGKLSAWVSADYGTCPDMHR 176
            F ++DLG  S+ LG  + RD++   L+  Q QYI  + ERF ++  T++   +     LSK+ +P    E+  M+ +PYR++VGALM+ A  TRPDIS+A   LA+F+ NPGP HW+AA+   +YL  T+D+ +TY   P      + +  AD+G   D  R
Sbjct:  862 FKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPYAPELFTTFSDADHGGDEDNRR 1023          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67005.14307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S4K4A0_9AGAM3.430e-3338.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4LBP1_9AGAM4.730e-3237.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4L7S0_9AGAM1.360e-3138.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3J8V8_9STRA3.270e-3140.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
E2LZP6_MONPE5.860e-3141.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4K791_9AGAM9.810e-3138.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4V3X9G3_9AGAM1.230e-3037.50Integrase catalytic domain-containing protein (Fra... [more]
A0A4S4KQD1_9AGAM1.900e-3038.89DOMON domain-containing protein n=1 Tax=Phellinidi... [more]
H3H572_PHYRM6.190e-3037.50Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]
A0A4S4KX50_9AGAM8.300e-3038.89Integrase catalytic domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67005contigH-elongata_contig67005:1505..2035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67005.14307.1mRNA_H-elongata_contig67005.14307.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67005 938..2356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67005.14307.1 ID=prot_H-elongata_contig67005.14307.1|Name=mRNA_H-elongata_contig67005.14307.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=177bp
MKRDEEQAVRDLCSCFPINDLGKASYYLGYHITRDQNAETLTFDQHQYIQ
TMAERFGVTKTSIIPSVAGEKALSKSDSPPTDAEVEEMRQIPYREIVGAL
MWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITY
GGKPGGGGKLSAWVSADYGTCPDMHR*
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