prot_H-elongata_contig67.14302.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig67.14302.1
Unique Nameprot_H-elongata_contig67.14302.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
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BLAST of mRNA_H-elongata_contig67.14302.1 vs. uniprot
Match: A0A6H5KY18_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY18_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 6.040e-24
Identity = 60/98 (61.22%), Postives = 68/98 (69.39%), Query Frame = 0 
Query:    1 NNDGFLSFGELKAALASLQMGVTPGEMRALFEHLETEL-VLCDGEGSGFTSGVISCQAFLDAVRAPLSGERLGIVRLAFRRMDLRNEGKVSPETVAQR 97
            N DGFLSFG+LKAAL+S + G+T  E+RALF HLETE      G G G  SGV+  QA LDA R PLSGERLG+V LAF +MD    G VSP TV QR
Sbjct: 1163 NKDGFLSFGDLKAALSSSRAGLTVPEVRALFTHLETEEGPRRAGGGGGDGSGVVPWQALLDATRPPLSGERLGLVLLAFGKMDKEGRGHVSPGTVTQR 1260
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BLAST of mRNA_H-elongata_contig67.14302.1 vs. uniprot
Match: D8LQ60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ60_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 5.340e-13
Identity = 46/97 (47.42%), Postives = 52/97 (53.61%), Query Frame = 0 
Query:    1 NNDGFLSFGELKAALASLQMGVTPGEMRALFEHLETELVLCDGEGSGFTSGVISCQAFLDAVRAPLSGERLGIVRLAFRRMDLRNEGKVSPETVAQR 97
            N DGFLSFG+LKAAL+S + G+T  E                              A LDA R PLSGERLG+VRLAF +MD    G VSPETV QR
Sbjct: 1190 NKDGFLSFGDLKAALSSSRAGLTIPE------------------------------ALLDATRPPLSGERLGLVRLAFGKMDKEGRGHVSPETVTQR 1256
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67.14302.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY18_9PHAE6.040e-2461.22Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LQ60_ECTSI5.340e-1347.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 1..96
e-value: 4.8E-10
score: 41.2
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 69..97
score: 6.312
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..21
score: 9.269
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 1..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67contigH-elongata_contig67:3653..3946 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67.14302.1mRNA_H-elongata_contig67.14302.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig67 3653..3946 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig67.14302.1 ID=prot_H-elongata_contig67.14302.1|Name=mRNA_H-elongata_contig67.14302.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
NNDGFLSFGELKAALASLQMGVTPGEMRALFEHLETELVLCDGEGSGFTS
GVISCQAFLDAVRAPLSGERLGIVRLAFRRMDLRNEGKVSPETVAQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair