prot_H-elongata_contig6697.14295.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig6697.14295.1
Unique Name	prot_H-elongata_contig6697.14295.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	110

Homology

[Close]

BLAST of mRNA_H-elongata_contig6697.14295.1 vs. uniprot
Match: A0A6H5L012_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L012_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 3.020e-20
Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = 0

Query:    1 MLCDKGRIRERWVRFFRSLLNAKSDMLDPNIPKRFPQHPVASALGIESTEEEITTAMKAVSNAKAVGPDGLLAELLKLRLQQDRTILRELHRLTTIIWRQGKVPQQWKDA 110
            +L D   IR+RW R+F  LLN KS  +D +   +  + P    L    +  E+  A++ ++N KAVGPD L AEL+KL L  D+ +LRE H +   +W+ G VPQQWKDA
Sbjct:   89 VLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLREVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKDA 198

[Close]

BLAST of mRNA_H-elongata_contig6697.14295.1 vs. uniprot
Match: A0A6H5JQE0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQE0_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 7.160e-20
Identity = 46/110 (41.82%), Postives = 65/110 (59.09%), Query Frame = 0

Query:    1 MLCDKGRIRERWVRFFRSLLNAKSDMLDPNIPKRFPQHPVASALGIESTEEEITTAMKAVSNAKAVGPDGLLAELLKLRLQQDRTILRELHRLTTIIWRQGKVPQQWKDA 110
            +L D   IR+RW R+F  LLN KS  +D +   +  + P    L    +  E+  A++ ++N KAVGPD L AEL+KL L  D+ +LRE H +   +W+ G VPQQWKD 
Sbjct:   24 VLQDPAFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHSIVVDVWQTGDVPQQWKDT 133

[Close]

BLAST of mRNA_H-elongata_contig6697.14295.1 vs. uniprot
Match: A0A6H5K0F8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0F8_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 8.900e-20
Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = 0

Query:    1 MLCDKGRIRERWVRFFRSLLNAKSDMLDPNIPKRFPQHPVASALGIESTEEEITTAMKAVSNAKAVGPDGLLAELLKLRLQQDRTILRELHRLTTIIWRQGKVPQQWKDA 110
            +L D   IR+RW R+F  LLN KS  +D +   +  + P    L    +  E+  A++ ++N KAVGPD L AEL+KL L  D+ +LRE H +   +W+ G VPQQWKDA
Sbjct:   79 VLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKDA 188

[Close]

BLAST of mRNA_H-elongata_contig6697.14295.1 vs. uniprot
Match: A0A6H5JY74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY74_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 9.230e-20
Identity = 49/110 (44.55%), Postives = 65/110 (59.09%), Query Frame = 0

Query:    1 MLCDKGRIRERWVRFFRSLLNAKSDMLDPNIPKRFPQHPVASALGIESTEEEITTAMKAVSNAKAVGPDGLLAELLKLRLQQDRTILRELHRLTTIIWRQGKVPQQWKDA 110
            +L D    R+RW R+F  LLN KS  +D +   R  Q P    L    +  E+  A++ ++N KAVGPD L AEL+KL L  DR +LRE H +   +W+ G VPQQWKDA
Sbjct:  320 VLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGDRGLLREFHAIVVDVWQTGDVPQQWKDA 429

[Close]

BLAST of mRNA_H-elongata_contig6697.14295.1 vs. uniprot
Match: A0A6H5KE31_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE31_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.240e-19
Identity = 49/110 (44.55%), Postives = 64/110 (58.18%), Query Frame = 0

Query:    1 MLCDKGRIRERWVRFFRSLLNAKSDMLDPNIPKRFPQHPVASALGIESTEEEITTAMKAVSNAKAVGPDGLLAELLKLRLQQDRTILRELHRLTTIIWRQGKVPQQWKDA 110
            +L D    R+RW R+F  LLN KS  +D +   R  Q P    L    +  E+  A++ ++N KAVGPD L AEL+KL L  DR  LRE H +   +W+ G VPQQWKDA
Sbjct:   22 VLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDA 131

[Close]

BLAST of mRNA_H-elongata_contig6697.14295.1 vs. uniprot
Match: A0A6H5KKB2_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB2_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.430e-19
Identity = 49/110 (44.55%), Postives = 64/110 (58.18%), Query Frame = 0

Query:    1 MLCDKGRIRERWVRFFRSLLNAKSDMLDPNIPKRFPQHPVASALGIESTEEEITTAMKAVSNAKAVGPDGLLAELLKLRLQQDRTILRELHRLTTIIWRQGKVPQQWKDA 110
            +L D    R+RW R+F  LLN KS  +D +   R  Q P    L    +  E+  A++ ++N KAVGPD L AEL+KL L  DR  LRE H +   +W+ G VPQQWKDA
Sbjct:   22 VLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDA 131

[Close]

BLAST of mRNA_H-elongata_contig6697.14295.1 vs. uniprot
Match: A0A6H5JP02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP02_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.440e-19
Identity = 49/110 (44.55%), Postives = 67/110 (60.91%), Query Frame = 0

Query:    1 MLCDKGRIRERWVRFFRSLLNAKSDMLDPNIPKRFPQHPVASALGIESTEEEITTAMKAVSNAKAVGPDGLLAELLKLRLQQDRTILRELHRLTTIIWRQGKVPQQWKDA 110
            +L D   IR+RW R+F  LLN KS  +D +   +  + P    L    +  EI  A++A++N KAVGPD L AEL+KL L  D+ +LRE H +   +W+ G VPQQWKDA
Sbjct:  273 VLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEIEEAVRAMANRKAVGPDDLQAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKDA 382

[Close]

BLAST of mRNA_H-elongata_contig6697.14295.1 vs. uniprot
Match: A0A6H5K8Z5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z5_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.460e-19
Identity = 49/110 (44.55%), Postives = 64/110 (58.18%), Query Frame = 0

Query:    1 MLCDKGRIRERWVRFFRSLLNAKSDMLDPNIPKRFPQHPVASALGIESTEEEITTAMKAVSNAKAVGPDGLLAELLKLRLQQDRTILRELHRLTTIIWRQGKVPQQWKDA 110
            +L D    R+RW R+F  LLN KS  +D +   R  Q P    L    +  E+  A++ ++N KAVGPD L AEL+KL L  DR  LRE H +   +W+ G VPQQWKDA
Sbjct:  300 VLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDA 409

[Close]

BLAST of mRNA_H-elongata_contig6697.14295.1 vs. uniprot
Match: A0A6H5JUB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB0_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.470e-19
Identity = 49/110 (44.55%), Postives = 64/110 (58.18%), Query Frame = 0

Query:    1 MLCDKGRIRERWVRFFRSLLNAKSDMLDPNIPKRFPQHPVASALGIESTEEEITTAMKAVSNAKAVGPDGLLAELLKLRLQQDRTILRELHRLTTIIWRQGKVPQQWKDA 110
            +L D    R+RW R+F  LLN KS  +D +   R  Q P    L    +  E+  A++ ++N KAVGPD L AEL+KL L  DR  LRE H +   +W+ G VPQQWKDA
Sbjct:   85 VLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDA 194

[Close]

BLAST of mRNA_H-elongata_contig6697.14295.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.470e-19
Identity = 49/110 (44.55%), Postives = 64/110 (58.18%), Query Frame = 0

Query:    1 MLCDKGRIRERWVRFFRSLLNAKSDMLDPNIPKRFPQHPVASALGIESTEEEITTAMKAVSNAKAVGPDGLLAELLKLRLQQDRTILRELHRLTTIIWRQGKVPQQWKDA 110
            +L D    R+RW R+F  LLN KS  +D +   R  Q P    L    +  E+  A++ ++N KAVGPD L AEL+KL L  DR  LRE H +   +W+ G VPQQWKDA
Sbjct:  438 VLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDA 547

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig6697.14295.1 vs. uniprot

BLAST of mRNA_H-elongata_contig6697.14295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L012_9PHAE	3.020e-20	42.73	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JQE0_9PHAE	7.160e-20	41.82	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K0F8_9PHAE	8.900e-20	42.73	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JY74_9PHAE	9.230e-20	44.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KE31_9PHAE	1.240e-19	44.55	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5KKB2_9PHAE	1.430e-19	44.55	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JP02_9PHAE	1.440e-19	44.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K8Z5_9PHAE	1.460e-19	44.55	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JUB0_9PHAE	1.470e-19	44.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KC90_9PHAE	1.470e-19	44.55	Reverse transcriptase domain-containing protein n=...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig6697	contig	H-elongata_contig6697:1..330 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig6697.14295.1	mRNA_H-elongata_contig6697.14295.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig6697 1..330 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig6697.14295.1 ID=prot_H-elongata_contig6697.14295.1|Name=mRNA_H-elongata_contig6697.14295.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
MLCDKGRIRERWVRFFRSLLNAKSDMLDPNIPKRFPQHPVASALGIESTE
EEITTAMKAVSNAKAVGPDGLLAELLKLRLQQDRTILRELHRLTTIIWRQ
GKVPQQWKDA