prot_H-elongata_contig6687.14288.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6687.14288.1
Unique Nameprot_H-elongata_contig6687.14288.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
BLAST of mRNA_H-elongata_contig6687.14288.1 vs. uniprot
Match: D7FRB8_ECTSI (Thaumatin-domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRB8_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 3.260e-9
Identity = 23/52 (44.23%), Postives = 31/52 (59.62%), Query Frame = 0
Query:    1 MGPQFSTQYFCGSTYYNTHQGPSSFDQCFMTCGGDDNIVCGGLWANSVYALG 52
            M  Q+S   FC  TYY   +     D C M C GD+N++CGG W+NS+Y +G
Sbjct:  289 MALQYSQDCFCADTYYTAERDAIPTDTCNMPCKGDENVICGGAWSNSIYIVG 340          
BLAST of mRNA_H-elongata_contig6687.14288.1 vs. uniprot
Match: D3P9U3_DEFDS (WSC domain-containing protein n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) TaxID=639282 RepID=D3P9U3_DEFDS)

HSP 1 Score: 52.0 bits (123), Expect = 2.340e-6
Identity = 24/48 (50.00%), Postives = 29/48 (60.42%), Query Frame = 0
Query:    2 GPQFSTQYFCGSTYYNTHQGPSSFDQCFMTCGGDDNIVCGGLWANSVY 49
            G Q+STQ FCG++Y          + C M C GD N +CGG WANSVY
Sbjct:   89 GVQYSTQCFCGNSYGKY----GVANNCNMKCSGDQNQICGGTWANSVY 132          
BLAST of mRNA_H-elongata_contig6687.14288.1 vs. uniprot
Match: A0A177E7S8_9BACT (Uncharacterized protein n=1 Tax=Thermodesulfatator autotrophicus TaxID=1795632 RepID=A0A177E7S8_9BACT)

HSP 1 Score: 50.8 bits (120), Expect = 5.980e-6
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    2 GPQFSTQYFCGSTYYNTHQGPSSFDQCFMTCGGDDNIVCGGLWANSVY 49
            G Q+S+Q FCG++Y     GP+    C M C GD+N +CGG WANS+Y
Sbjct:  184 GVQYSSQCFCGNSYGK--YGPAI--NCNMKCTGDENQICGGNWANSIY 227          
BLAST of mRNA_H-elongata_contig6687.14288.1 vs. uniprot
Match: A0A0S3QUQ3_THET7 (WSC domain-containing protein n=1 Tax=Thermosulfidibacter takaii (strain DSM 17441 / JCM 13301 / NBRC 103674 / ABI70S6) TaxID=1298851 RepID=A0A0S3QUQ3_THET7)

HSP 1 Score: 49.3 bits (116), Expect = 2.090e-5
Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    2 GPQFSTQYFCGSTYYNTHQGPSSFDQCFMTCGGDDNIVCGGLWANSVYA 50
            G Q+S+  FCG++Y     GP++   C M C G+ N +CGG WANSVYA
Sbjct:  162 GVQYSSFCFCGNSYGK--YGPAN--NCNMRCSGNTNKICGGYWANSVYA 206          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6687.14288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FRB8_ECTSI3.260e-944.23Thaumatin-domain containing protein n=2 Tax=Ectoca... [more]
D3P9U3_DEFDS2.340e-650.00WSC domain-containing protein n=1 Tax=Deferribacte... [more]
A0A177E7S8_9BACT5.980e-650.00Uncharacterized protein n=1 Tax=Thermodesulfatator... [more]
A0A0S3QUQ3_THET72.090e-548.98WSC domain-containing protein n=1 Tax=Thermosulfid... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6687contigH-elongata_contig6687:1332..1487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6687.14288.1mRNA_H-elongata_contig6687.14288.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6687 1323..1487 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6687.14288.1 ID=prot_H-elongata_contig6687.14288.1|Name=mRNA_H-elongata_contig6687.14288.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
MGPQFSTQYFCGSTYYNTHQGPSSFDQCFMTCGGDDNIVCGGLWANSVYA
LG
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