prot_H-elongata_contig66766.14279.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66766.14279.1
Unique Nameprot_H-elongata_contig66766.14279.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length138
Homology
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BLAST of mRNA_H-elongata_contig66766.14279.1 vs. uniprot
Match: A0A7S2V4F7_9STRA (Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4F7_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.750e-49
Identity = 79/113 (69.91%), Postives = 92/113 (81.42%), Query Frame = 0 
Query:   23 PNKLRYTRFSPSVNAPSTQHAGKSTVLDVSESTTILEAALDNGIELPHDCKLGVCLTCPSRIVSGEVDQSDGTLDDSVVQQGFALTCCAYPKSDVVIRCVEEDQLVGAQFSDR 135
            P+ L   R  P  +  + QH GK TVL+V ESTTILEAALD GI+LPHDC+LGVCLTCPSRIVSGEVDQ  GTLDDSVV+QGFALTC +YP+SD V+R VEED++V AQF+DR
Sbjct:   38 PSSLSRQRLVPKAHQVTIQHEGKDTVLEVDESTTILEAALDAGIDLPHDCQLGVCLTCPSRIVSGEVDQGMGTLDDSVVEQGFALTCISYPRSDCVVRSVEEDEMVNAQFADR 150
[Close]
BLAST of mRNA_H-elongata_contig66766.14279.1 vs. uniprot
Match: A0A6H5KV05_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV05_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 4.040e-48
Identity = 79/116 (68.10%), Postives = 93/116 (80.17%), Query Frame = 0 
Query:   21 AHPNKLRYTRFSPSVNAPSTQHAGKSTVLDVSESTTILEAALDNGIELPHDCKLGVCLTCPSRIVSGEVDQSDGTLDDSVVQQGFALTCCAYPKSDVVIRCVEEDQLVGAQFSDRS 136
            A    LR T  +  ++  + +H G STVL+V E+TTILEAALDN I+LPHDCKLGVCLTCPS++VSGEVDQSDGTL+DSV   G+ALTCC Y +SDV IR VEED+LVGAQFSDRS
Sbjct:   49 ARQETLRPTFSALQMHQVTIEHEGTSTVLEVDENTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSDRS 164
[Close]
BLAST of mRNA_H-elongata_contig66766.14279.1 vs. uniprot
Match: A0A836CGC2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC2_9STRA)

HSP 1 Score: 150 bits (379), Expect = 5.480e-44
Identity = 69/93 (74.19%), Postives = 82/93 (88.17%), Query Frame = 0 
Query:   43 AGKSTVLDVSESTTILEAALDNGIELPHDCKLGVCLTCPSRIVSGEVDQSDGTLDDSVVQQGFALTCCAYPKSDVVIRCVEEDQLVGAQFSDR 135
            AGKS  L+V E T++LEAALD GIELPHDCKLGVCLTCPS+IVSGEVDQ   TLDDSVV+QG+ALTCC++P+SD+VIR ++ED+LVGAQF  R
Sbjct:   62 AGKSHTLEVDEKTSVLEAALDAGIELPHDCKLGVCLTCPSKIVSGEVDQDGTTLDDSVVEQGYALTCCSFPRSDLVIRAIDEDELVGAQFEGR 154
[Close]
BLAST of mRNA_H-elongata_contig66766.14279.1 vs. uniprot
Match: A0A7S3UW21_HETAK (Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW21_HETAK)

HSP 1 Score: 147 bits (371), Expect = 6.040e-43
Identity = 71/122 (58.20%), Postives = 92/122 (75.41%), Query Frame = 0 
Query:   15 PIVLTIAHPNKLRYTRFSPSVNAPSTQHAGKSTVLDVSESTTILEAALDNGIELPHDCKLGVCLTCPSRIVSGEVDQSDGTLDDSVVQQGFALTCCAYPKSDVVIRCVEEDQLVGAQFSDRS 136
            P+VL      +++ +R  P  +  + +H G +TVL+V E T+IL+AALD GI+LPHDCKLGVCLTCPS++VSGEVDQSDGTL+DSV  QG+ALTC  +P+SD  I  + ED+LV AQFS RS
Sbjct:   25 PVVLK----TRVKSSRIVPKAHQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFSGRS 142
[Close]
BLAST of mRNA_H-elongata_contig66766.14279.1 vs. uniprot
Match: A0A482SDV3_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDV3_9ARCH)

HSP 1 Score: 141 bits (356), Expect = 1.180e-40
Identity = 70/109 (64.22%), Postives = 86/109 (78.90%), Query Frame = 0 
Query:   32 SPSVNAPS----TQHAGKSTVLDVSESTTILEAALDNGIELPHDCKLGVCLTCPSRIVSGEVDQSDGTLDDSVVQQGFALTCCAYPKSDVVIRCVEEDQLVGAQFSDRS 136
            SPS++A +     QH GK T+LDV +  +IL AALD GI+LPHDCKLGVCLTCPS+IVSG+VDQSDGTL  SV  +G+ALTC ++P SDVV+R +EED+LV AQFS  S
Sbjct:   35 SPSLHAKTYKVTIQHEGKDTILDVQDDCSILNAALDAGIDLPHDCKLGVCLTCPSKIVSGKVDQSDGTLAKSVQAKGYALTCVSFPCSDVVVRSIEEDELVSAQFSRNS 143
[Close]
BLAST of mRNA_H-elongata_contig66766.14279.1 vs. uniprot
Match: A0A8J5WV81_ZIZPA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WV81_ZIZPA)

HSP 1 Score: 128 bits (321), Expect = 2.490e-35
Identity = 56/93 (60.22%), Postives = 74/93 (79.57%), Query Frame = 0 
Query:   41 QHAGKSTVLDVSESTTILEAALDNGIELPHDCKLGVCLTCPSRIVSGEVDQSDGTLDDSVVQQGFALTCCAYPKSDVVIRCVEEDQLVGAQFS 133
            +HAG+S V++V E  TILE ALD GI++PHDCKLGVC+TCP+R+V+G+VDQSDG L D VV QG+AL C +YP+SD  IR + ED+L+  Q +
Sbjct:   48 EHAGESRVVEVEEHETILERALDEGIDVPHDCKLGVCMTCPARLVAGQVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 140
[Close]
BLAST of mRNA_H-elongata_contig66766.14279.1 vs. uniprot
Match: UPI001ADA50ED (ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI001ADA50ED)

HSP 1 Score: 126 bits (316), Expect = 1.340e-34
Identity = 55/93 (59.14%), Postives = 72/93 (77.42%), Query Frame = 0 
Query:   41 QHAGKSTVLDVSESTTILEAALDNGIELPHDCKLGVCLTCPSRIVSGEVDQSDGTLDDSVVQQGFALTCCAYPKSDVVIRCVEEDQLVGAQFS 133
            +H G+S V++V E  TIL  ALD GI++PHDCKLGVC+TCP+R+V+GEVDQSDG L D VV QG+AL C +YP+SD  IR + ED+L+  Q +
Sbjct:   46 EHGGESRVVEVGEDETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 138
[Close]
BLAST of mRNA_H-elongata_contig66766.14279.1 vs. uniprot
Match: Q850T5_ORYSJ (Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_ORYSJ)

HSP 1 Score: 126 bits (316), Expect = 1.560e-34
Identity = 55/93 (59.14%), Postives = 72/93 (77.42%), Query Frame = 0 
Query:   41 QHAGKSTVLDVSESTTILEAALDNGIELPHDCKLGVCLTCPSRIVSGEVDQSDGTLDDSVVQQGFALTCCAYPKSDVVIRCVEEDQLVGAQFS 133
            +H G+S V++V E  TIL  ALD GI++PHDCKLGVC+TCP+R+V+GEVDQSDG L D VV QG+AL C +YP+SD  IR + ED+L+  Q +
Sbjct:   51 EHGGESRVVEVEEGETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLKVQLA 143
[Close]
BLAST of mRNA_H-elongata_contig66766.14279.1 vs. uniprot
Match: J3LRB4_ORYBR (Ferredoxin n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3LRB4_ORYBR)

HSP 1 Score: 126 bits (316), Expect = 1.800e-34
Identity = 55/93 (59.14%), Postives = 72/93 (77.42%), Query Frame = 0 
Query:   41 QHAGKSTVLDVSESTTILEAALDNGIELPHDCKLGVCLTCPSRIVSGEVDQSDGTLDDSVVQQGFALTCCAYPKSDVVIRCVEEDQLVGAQFS 133
            +H G+S V++V E  TIL  ALD GI++PHDCKLGVC+TCP+R+V+GEVDQSDG L D VV QG+AL C +YP+SD  IR + ED+L+  Q +
Sbjct:   56 EHGGESRVVEVGEDETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 148
[Close]
BLAST of mRNA_H-elongata_contig66766.14279.1 vs. uniprot
Match: A0A2G9HQV3_9LAMI (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HQV3_9LAMI)

HSP 1 Score: 126 bits (316), Expect = 1.910e-34
Identity = 61/128 (47.66%), Postives = 89/128 (69.53%), Query Frame = 0 
Query:   10 FHPIVPIVLTIAHPNKL--RYTRFSPSVNAPST--QHAGKSTVLDVSESTTILEAALDNGIELPHDCKLGVCLTCPSRIVSGEVDQSDGTLDDSVVQQGFALTCCAYPKSDVVIRCVEEDQLVGAQFS 133
            FHP  P +   + PN+L  R+ R S +V A     +H G++T L+V    TIL  ALD+G+ +PHDCKLGVC+TCP+R+VSG+VDQS+G L D VV++G+AL C +YP+SD  I+ + E++L+  Q +
Sbjct:   23 FHPNTPYLKPHSTPNRLHLRHCRRSTAVKAYKVLIEHGGETTELEVEPDETILSKALDSGLSVPHDCKLGVCMTCPARLVSGKVDQSEGMLSDDVVERGYALMCSSYPRSDCRIKIIPEEELLSLQLA 150
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66766.14279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2V4F7_9STRA1.750e-4969.91Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617... [more]
A0A6H5KV05_9PHAE4.040e-4868.102Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A836CGC2_9STRA5.480e-4474.192Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S3UW21_HETAK6.040e-4358.20Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
A0A482SDV3_9ARCH1.180e-4064.222Fe-2S iron-sulfur cluster binding domain-containi... [more]
A0A8J5WV81_ZIZPA2.490e-3560.222Fe-2S ferredoxin-type domain-containing protein n... [more]
UPI001ADA50ED1.340e-3459.14ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachy... [more]
Q850T5_ORYSJ1.560e-3459.14Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_... [more]
J3LRB4_ORYBR1.800e-3459.14Ferredoxin n=1 Tax=Oryza brachyantha TaxID=4533 Re... [more]
A0A2G9HQV3_9LAMI1.910e-3447.662Fe-2S ferredoxin-type domain-containing protein n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 44..114
e-value: 6.2E-14
score: 51.7
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 33..125
score: 11.064
IPR010241Ferredoxin [2Fe-2S], plantTIGRFAMTIGR02008TIGR02008coord: 42..127
e-value: 2.0E-24
score: 83.2
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 27..129
e-value: 2.6E-24
score: 87.2
NoneNo IPR availablePANTHERPTHR43112:SF9FERREDOXIN C 1, CHLOROPLASTICcoord: 39..132
NoneNo IPR availablePANTHERPTHR43112FAMILY NOT NAMEDcoord: 39..132
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 24..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66766contigH-elongata_contig66766:854..1507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66766.14279.1mRNA_H-elongata_contig66766.14279.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66766 854..2990 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66766.14279.1 ID=prot_H-elongata_contig66766.14279.1|Name=mRNA_H-elongata_contig66766.14279.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=138bp
MERERCAEIFHPIVPIVLTIAHPNKLRYTRFSPSVNAPSTQHAGKSTVLD
VSESTTILEAALDNGIELPHDCKLGVCLTCPSRIVSGEVDQSDGTLDDSV
VQQGFALTCCAYPKSDVVIRCVEEDQLVGAQFSDRST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR010241Fd_pln
IPR012675Beta-grasp_dom_sf
IPR0360102Fe-2S_ferredoxin-like_sf