prot_H-elongata_contig66753.14277.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66753.14277.1
Unique Nameprot_H-elongata_contig66753.14277.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length141
Homology
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BLAST of mRNA_H-elongata_contig66753.14277.1 vs. uniprot
Match: D7FV10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV10_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 1.000e-38
Identity = 85/141 (60.28%), Postives = 100/141 (70.92%), Query Frame = 0 
Query:    2 ENYFGHLALH-VQQEDDGDEDFEPSLLDVDLEEEXXXEEAGVRRRNIQSRELSDLLQDAYKQLGPSIVSPGLKERVLDQLSMHFQLLVQTSILALQARTQTSADRCDRGRNISLGMLEHLACRPNNAAKKGQGRRTRARGK 141
            E+ + H  L  + +EDDGDEDFEP ++D D E     EEAGVRRRNIQ+REL+DL+QDAYKQLG S VSPGL+ERVLDQLSMHFQLLVQT +LA +A + T  D+        +GMLEHLAC     A     RRTRARGK
Sbjct:   35 EDLYRHFLLDDMPEEDDGDEDFEPPVVDEDEE----GEEAGVRRRNIQARELNDLVQDAYKQLGTSAVSPGLRERVLDQLSMHFQLLVQTGVLASKAPS-TYRDQ----ETACVGMLEHLACGSGKHA-----RRTRARGK 161
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66753.14277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV10_ECTSI1.000e-3860.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66753contigH-elongata_contig66753:654..1860 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66753.14277.1mRNA_H-elongata_contig66753.14277.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66753 654..1860 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66753.14277.1 ID=prot_H-elongata_contig66753.14277.1|Name=mRNA_H-elongata_contig66753.14277.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp
FENYFGHLALHVQQEDDGDEDFEPSLLDVDLEEEEEDEEAGVRRRNIQSR
ELSDLLQDAYKQLGPSIVSPGLKERVLDQLSMHFQLLVQTSILALQARTQ
TSADRCDRGRNISLGMLEHLACRPNNAAKKGQGRRTRARGK
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