prot_H-elongata_contig66733.14275.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66733.14275.1
Unique Nameprot_H-elongata_contig66733.14275.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length294
Homology
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BLAST of mRNA_H-elongata_contig66733.14275.1 vs. uniprot
Match: D8LT64_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT64_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 2.250e-91
Identity = 186/291 (63.92%), Postives = 211/291 (72.51%), Query Frame = 0 
Query:    9 CGVCGTKAGDLVCRGCVTREAERRKDERTERLKALNDIRKAAAKAINERRITVEREVRLEKETSDERRLKDQVREVTQRVAEERIMVASASFALRHQRELLAAAESHLGRETSLAVEMKPALLNGLRRHAEDAARTLRQRRWRRVVQLFVLLPVAPSFPPMND------RSTAPEGVDIGDIESVRSRQEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALMDLPLPNNGDYSQVPADVLMAALALLARLVDGIASCLGVSLPHPLVPTASTRYAAVTVDSSLPER 293
            CGVC  KAGDLVC  CVTREAERR+ ER +RL AL  +R+AA  A  ER + V+ + RL+KE +DE RLKD VREV +RVAEERI VASA+FAL+H R+LLAAAESHL RE + AVEM  ALL GLRRHAEDAARTLRQRRWR+VVQLFVLLPV PS PP  +      ++        G   S    +E            XXXXXXXXXXXXXXX      S L+DLPLPNNGDYSQVPADVLMA+LAL+ARLV  +ASCLGVSLPHPL P ASTRYA ++VDSS  ER
Sbjct:   10 CGVCNAKAGDLVCGACVTREAERRRAERAKRLGALESVREAATVAAQERGVAVQHDARLQKEEADECRLKDHVREVAKRVAEERIKVASAAFALKHHRDLLAAAESHLSREQASAVEMNEALLIGLRRHAEDAARTLRQRRWRKVVQLFVLLPVEPSMPPRREWPLRGKKNLGGGDHSPGTAPSTAESEEG----REVTRLPXXXXXXXXXXXXXXXEVVSGVSTLVDLPLPNNGDYSQVPADVLMASLALVARLVAAVASCLGVSLPHPLFPAASTRYATISVDSSPRER 296
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BLAST of mRNA_H-elongata_contig66733.14275.1 vs. uniprot
Match: A0A7S3GZ98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZ98_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 5.000e-7
Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 0 
Query:  226 SALMDLPLPNNGDYSQVPADVLMAALALLARLVDGIASCLGVSLPHPLVPTAST 279
            S+++ +PLPN+GDYS  P DV+  A A +A LVD +++ L + LPHPL+P  ST
Sbjct:   40 SSILSVPLPNSGDYSGTPVDVVAMAFAHIALLVDALSATLNIPLPHPLLPFQST 93
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66733.14275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LT64_ECTSI2.250e-9163.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3GZ98_9STRA5.000e-750.00Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..46
NoneNo IPR availableCOILSCoilCoilcoord: 67..87
NoneNo IPR availablePANTHERPTHR15157FAMILY NOT NAMEDcoord: 37..291
IPR018791UV radiation resistance protein/autophagy-related protein 14PFAMPF10186Atg14coord: 9..280
e-value: 3.3E-14
score: 52.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66733contigH-elongata_contig66733:13..2057 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66733.14275.1mRNA_H-elongata_contig66733.14275.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66733 13..2057 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66733.14275.1 ID=prot_H-elongata_contig66733.14275.1|Name=mRNA_H-elongata_contig66733.14275.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=294bp
MPTARQSNCGVCGTKAGDLVCRGCVTREAERRKDERTERLKALNDIRKAA
AKAINERRITVEREVRLEKETSDERRLKDQVREVTQRVAEERIMVASASF
ALRHQRELLAAAESHLGRETSLAVEMKPALLNGLRRHAEDAARTLRQRRW
RRVVQLFVLLPVAPSFPPMNDRSTAPEGVDIGDIESVRSRQEAGSVGARR
KNRNGQGGIRGMGLQGASAAAVSGVSALMDLPLPNNGDYSQVPADVLMAA
LALLARLVDGIASCLGVSLPHPLVPTASTRYAAVTVDSSLPER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018791UV_resistance/autophagy_Atg14