prot_H-elongata_contig66706.14273.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66706.14273.1
Unique Nameprot_H-elongata_contig66706.14273.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
BLAST of mRNA_H-elongata_contig66706.14273.1 vs. uniprot
Match: D8LNW5_ECTSI (Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW5_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 1.220e-35
Identity = 68/85 (80.00%), Postives = 76/85 (89.41%), Query Frame = 0
Query:    2 QVSLRFADAETLDKVLGVVQGAVSPLAVVNDSEGLATLAMDKDLVDASELLVHPLRNDRSVRLNAADLVKFVTVCGHAPKVLDFS 86
            +VSLRFADA TLD VLGVVQGAVSPLAVVND EG+A LAMDK +++A E+LVHPLRNDRSVR+ AADLVK+VT CGHAP VLDFS
Sbjct:  267 KVSLRFADAATLDSVLGVVQGAVSPLAVVNDVEGVARLAMDKSVMEAEEVLVHPLRNDRSVRIKAADLVKYVTACGHAPTVLDFS 351          
BLAST of mRNA_H-elongata_contig66706.14273.1 vs. uniprot
Match: A0A835YT63_9STRA (Proline--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT63_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.520e-21
Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    4 SLRFADAETLDKVLGVVQGAVSPLAVVNDSEGLATLAMDKDLVDASELLVHPLRNDRSVRLNAADLVKFVTVCGHAPKVLDFS 86
            +LRFAD ETL  +LGV QG+V PLAV+ND+EG AT  +DK L  A  +  HPLRNDR+  ++A DL+ +   C H P +LDF+
Sbjct:  275 NLRFADEETLSAILGVKQGSVGPLAVLNDTEGQATFVLDKKLAQADIINSHPLRNDRTTAVSAKDLIAYANACNHPPTILDFA 357          
BLAST of mRNA_H-elongata_contig66706.14273.1 vs. uniprot
Match: A0A2E4H0N0_9PROT (tRNA_edit domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4H0N0_9PROT)

HSP 1 Score: 85.9 bits (211), Expect = 3.030e-19
Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    1 SQVSLRFADAETLDKVLGVVQGAVSPLAVVNDSEGLATLAMDKDLVDASELLVHPLRNDRSVRLNAADLVKFVTVCGHAPKVLDFS 86
            +Q +L F  +E+L+++LGVV GAV+PL+V+ND     T  +DK+L+DA  +  HPLRND +  L+A DL+ F+    H+P +LDFS
Sbjct:   83 AQGTLSFGSSESLNELLGVVPGAVTPLSVINDKGSAVTAFIDKELLDADLVNAHPLRNDMTTALSARDLITFMETVHHSPNILDFS 168          
BLAST of mRNA_H-elongata_contig66706.14273.1 vs. uniprot
Match: A0A1V9YDF7_9STRA (Proline--tRNA ligase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YDF7_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.720e-18
Identity = 43/86 (50.00%), Postives = 61/86 (70.93%), Query Frame = 0
Query:    1 SQVSLRFADAETLDKVLGVVQGAVSPLAVVNDSEGLATLAMDKDLVDASELLVHPLRNDRSVRLNAADLVKFVTVCGHAPKVLDFS 86
            ++V+LRFA  + L   L V QG+VSPLAV+ND+EG   L +D+ L+ A ++  HPL+ND++V L  ADL+KFV   GH P ++DFS
Sbjct:   79 NKVNLRFASEDVLHDTLKVKQGSVSPLAVMNDTEGQVKLVLDETLLKAEKINCHPLQNDKTVSLTPADLLKFVRHYGHEPLIVDFS 164          
BLAST of mRNA_H-elongata_contig66706.14273.1 vs. uniprot
Match: A0A7S3ANH3_9EUKA (Proline--tRNA ligase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ANH3_9EUKA)

HSP 1 Score: 86.7 bits (213), Expect = 5.990e-18
Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    4 SLRFADAETLDKVLGVVQGAVSPLAVVNDSEGLATLAMDKDLVDASELLVHPLRNDRSVRLNAADLVKFVTVCGHAPKVLDF 85
            + RFA AE L ++LGV QG+VSPLAV+ND+ G  TL +DK+L+ A+ + VHPLRND + +++  DL KFV+   H  KV+DF
Sbjct:   88 NFRFATAEVLQELLGVQQGSVSPLAVMNDTTGAVTLCIDKELMQANYVGVHPLRNDMTNQISPDDLTKFVSHFKHDAKVIDF 169          
BLAST of mRNA_H-elongata_contig66706.14273.1 vs. uniprot
Match: W7TR23_9STRA (Proline--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR23_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 8.190e-18
Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    2 QVSLRFADAETLDKVLGVVQGAVSPLAVVNDSEGLATLAMDKDLVDASELLVHPLRNDRSVRLNAADLVKFVTVCGHAPKVLDF 85
            + +LRFAD ETL+ +L V +GAVS LAV+ND+    TLAMDK L++   + +HPLRNDR+V +  A L++FV   GH P +LDF
Sbjct:  114 KANLRFADEETLEGLLKVKRGAVSALAVLNDTGNAVTLAMDKALMEQPIVNLHPLRNDRTVAIPTAALLQFVHAAGHEPTMLDF 197          
BLAST of mRNA_H-elongata_contig66706.14273.1 vs. uniprot
Match: A0A0F5PUX7_9HYPH (Ala-tRNA(Pro) hydrolase n=1 Tax=Devosia psychrophila TaxID=728005 RepID=A0A0F5PUX7_9HYPH)

HSP 1 Score: 82.0 bits (201), Expect = 9.190e-18
Identity = 38/79 (48.10%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    7 FADAETLDKVLGVVQGAVSPLAVVNDSEGLATLAMDKDLVDASELLVHPLRNDRSVRLNAADLVKFVTVCGHAPKVLDF 85
            FA +ETL + LGV+QG+VSPLA++ND+     L + KD++    + VHPL N  +V L + +LVKFVT  GH+P ++DF
Sbjct:   85 FASSETLLEALGVIQGSVSPLALINDTANAVQLVLAKDMLAQPRITVHPLVNTATVSLTSDELVKFVTATGHSPDIVDF 163          
BLAST of mRNA_H-elongata_contig66706.14273.1 vs. uniprot
Match: UPI0015F3C2C6 (prolyl-tRNA synthetase associated domain-containing protein n=1 Tax=Aureimonas sp. ME7 TaxID=2744252 RepID=UPI0015F3C2C6)

HSP 1 Score: 80.5 bits (197), Expect = 3.660e-17
Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    7 FADAETLDKVLGVVQGAVSPLAVVNDSEGLATLAMDKDLVDASELLVHPLRNDRSVRLNAADLVKFVTVCGHAPKVLDF 85
            FA AETL + LGVVQG+VSPLA+VND     +L +DK ++    L VHPLRN  +V L +ADL++ V   GH  +++DF
Sbjct:   84 FASAETLLEALGVVQGSVSPLALVNDKAKAVSLVLDKRMLSHPRLTVHPLRNTATVSLASADLLRVVEATGHEAQIVDF 162          
BLAST of mRNA_H-elongata_contig66706.14273.1 vs. uniprot
Match: A0A6N6TGD3_9GAMM (Prolyl-tRNA synthetase associated domain-containing protein n=1 Tax=Candidatus Contendobacter sp. TaxID=2651161 RepID=A0A6N6TGD3_9GAMM)

HSP 1 Score: 79.7 bits (195), Expect = 6.520e-17
Identity = 34/77 (44.16%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    7 FADAETLDKVLGVVQGAVSPLAVVNDSEGLATLAMDKDLVDASELLVHPLRNDRSVRLNAADLVKFVTVCGHAPKVL 83
            FA+ E L ++LGVV GAVSP A +ND++G A + +D+ ++DA  L  HPL+NDR+  +   DL++F+   GH P+++
Sbjct:   84 FANEEELGRILGVVPGAVSPFAAINDADGRACIVLDRRVLDADLLNCHPLQNDRTTTIATGDLLRFLEAVGHPPRII 160          
BLAST of mRNA_H-elongata_contig66706.14273.1 vs. uniprot
Match: A0A433I4J6_9GAMM (Prolyl-tRNA synthetase associated domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A433I4J6_9GAMM)

HSP 1 Score: 77.8 bits (190), Expect = 3.670e-16
Identity = 34/77 (44.16%), Postives = 52/77 (67.53%), Query Frame = 0
Query:    7 FADAETLDKVLGVVQGAVSPLAVVNDSEGLATLAMDKDLVDASELLVHPLRNDRSVRLNAADLVKFVTVCGHAPKVL 83
            FA+AE LD++LGV  GAVSP A VND EG   + +++ ++D   L  HPLRNDR+  +   +L++F+   GH P+++
Sbjct:   84 FANAEALDRLLGVQPGAVSPFAAVNDVEGQVCVVLEQQVLDTERLNCHPLRNDRTTTIATTELLRFLDQIGHPPRII 160          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66706.14273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNW5_ECTSI1.220e-3580.00Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YT63_9STRA2.520e-2153.01Proline--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A2E4H0N0_9PROT3.030e-1946.51tRNA_edit domain-containing protein n=1 Tax=Rhodos... [more]
A0A1V9YDF7_9STRA1.720e-1850.00Proline--tRNA ligase n=2 Tax=Saprolegniaceae TaxID... [more]
A0A7S3ANH3_9EUKA5.990e-1852.44Proline--tRNA ligase n=1 Tax=Haptolina ericina Tax... [more]
W7TR23_9STRA8.190e-1852.38Proline--tRNA ligase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A0F5PUX7_9HYPH9.190e-1848.10Ala-tRNA(Pro) hydrolase n=1 Tax=Devosia psychrophi... [more]
UPI0015F3C2C63.660e-1750.63prolyl-tRNA synthetase associated domain-containin... [more]
A0A6N6TGD3_9GAMM6.520e-1744.16Prolyl-tRNA synthetase associated domain-containin... [more]
A0A433I4J6_9GAMM3.670e-1644.16Prolyl-tRNA synthetase associated domain-containin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036754YbaK/aminoacyl-tRNA synthetase-associated domain superfamilyGENE3D3.90.960.10coord: 2..86
e-value: 3.0E-23
score: 84.3
IPR036754YbaK/aminoacyl-tRNA synthetase-associated domain superfamilySUPERFAMILY55826YbaK/ProRS associated domaincoord: 5..85
IPR007214YbaK/aminoacyl-tRNA synthetase-associated domainPFAMPF04073tRNA_editcoord: 4..72
e-value: 4.3E-12
score: 46.2
IPR040285Prolyl-tRNA editing protein ProX/PRXD1PANTHERPTHR31423FAMILY NOT NAMEDcoord: 4..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66706contigH-elongata_contig66706:1310..2329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66706.14273.1mRNA_H-elongata_contig66706.14273.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66706 1310..2329 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66706.14273.1 ID=prot_H-elongata_contig66706.14273.1|Name=mRNA_H-elongata_contig66706.14273.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
SQVSLRFADAETLDKVLGVVQGAVSPLAVVNDSEGLATLAMDKDLVDASE
LLVHPLRNDRSVRLNAADLVKFVTVCGHAPKVLDFS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036754YbaK/aa-tRNA-synt-asso_dom_sf
IPR007214YbaK/aa-tRNA-synth-assoc-dom
IPR040285ProX/PRXD1