prot_H-elongata_contig66399.14237.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66399.14237.1
Unique Nameprot_H-elongata_contig66399.14237.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length545
Homology
BLAST of mRNA_H-elongata_contig66399.14237.1 vs. uniprot
Match: D8LNZ2_ECTSI (Exonuclease domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ2_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 1.210e-96
Identity = 254/512 (49.61%), Postives = 306/512 (59.77%), Query Frame = 0
Query:   89 IRNLPAVRATLILALTGTAVTAVSRPPNGKGDS------VAESVS---SAISKMTVSPFNSLEGFSESFRQKFRLRAGLRISSGGFSAVSGEGSSEVTGN---------------------WLKSLADAFLHAPLGEGSAACPDASLSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXKKVNK---------------------ADQAENVLHGVEGSDASGGEDSDDPCTS--NGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSENKGVEESSDGDSGGDEDRSSPLPTAETYILTREQLKENEFPVPTAPATKQNGSQPSSLKRLE-KAVLPTAESAEDILRGLPELTGMPGYFQTQPLSDGG--GEGRDATGPRMLGLDCEMCVTAEGSELTRVTLVDSEHKVLIDQLVKPENHIVNYATRWGGITPELLASVDTNLQQVQAMMLQIVGAGDILVGHSLENDLNALKMVHLRCLDTSLLYPHPKQGRRASLKYLVSM 544
            +RNLPAVRA L++ALTG A +A   PP  K D        AES++   SA +   V+P + L+GF+E F++KFRL AGLRISSGGFS    +G + V  +                     WLKSLADAFL+APLGE   ACP    S     XXXXXXXXXXXXXXXXXXXXXX  + V +                     AD   +    VE     GG D+DD   +  +G                          XXXXXXXXXXXXX       VEE SD           PLP  ETYIL+ E+L+E+ FPV + PA K+     + L R+    VLPT E AE I+    +L  + G+ QTQPLSD G   EG  A G R+ GLDCEMCVT  G ELTRVTLVDS+HKV++D+LVKPENHIV+Y TR+ GITP+LL +VDT L+QVQA +L++VG  D+LVGHSLENDL ALKMVHLRCLDTSLLYPHPK+GRR+SL+YLVSM
Sbjct:    1 MRNLPAVRAVLVVALTGAATSA---PPQRKADGEDSAIDAAESLTVPPSAATAAAVAPNSPLDGFTEEFKRKFRLCAGLRISSGGFSVGPADGGAAVPSDGXXXXXXXXXXXXXXXXXXXXWLKSLADAFLYAPLGEDREACPAGPFSGSKKRXXXXXXXXXXXXXXXXXXXXXXEAENVRQQRSMESGVAEAIAPQVNGPGIADGNSSQREEVEEKGTQGG-DADDSLAAAPSGGKREGVQEPTVTAMDTAAEAEDGDREXXXXXXXXXXXXXXXXXXXXVEEGSD---------DPPLPAVETYILSVEKLREHGFPV-SYPAEKEEEVNHTPLDRVSGNVVLPTKEEAEGIVGRASKLVDLEGHVQTQPLSDAGVAEEGEAAAGARLFGLDCEMCVTGAGQELTRVTLVDSQHKVVLDELVKPENHIVDYVTRYSGITPQLLENVDTRLRQVQAAVLRVVGVRDVLVGHSLENDLKALKMVHLRCLDTSLLYPHPKKGRRSSLRYLVSM 498          
BLAST of mRNA_H-elongata_contig66399.14237.1 vs. uniprot
Match: A0A835ZA27_9STRA (Exonuclease domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA27_9STRA)

HSP 1 Score: 162 bits (410), Expect = 6.500e-39
Identity = 79/133 (59.40%), Postives = 99/133 (74.44%), Query Frame = 0
Query:  410 GGGEGRDATGPRMLGLDCEMCVTAEGSELTRVTLVDSEHKVLIDQLVKPENHIVNYATRWGGITPELLASVDTNLQQVQAMMLQIVGAGDILVGHSLENDLNALKMVHLRCLDTSLLYPHPKQGRRASLKYLV 542
            GGGE R    PR+ GLDCEMC T +G EL RVTLVD EH VL+D+LVKP N I ++ TRW GI+ ++L  + T L QVQA +L IV   D+LVGHSLENDL AL+++H RCLDTS+L+PHPK G++ SL+ L 
Sbjct:  393 GGGERR----PRLFGLDCEMCQTCDGLELCRVTLVDEEHCVLLDELVKPANAITDHMTRWSGISAQMLQPIATRLCQVQARLLSIVDCRDLLVGHSLENDLRALQLIHERCLDTSILFPHPKSGKKCSLRSLA 521          
BLAST of mRNA_H-elongata_contig66399.14237.1 vs. uniprot
Match: A0A7S1SV13_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SV13_9CHLO)

HSP 1 Score: 138 bits (348), Expect = 3.730e-35
Identity = 64/121 (52.89%), Postives = 93/121 (76.86%), Query Frame = 0
Query:  422 MLGLDCEMCVTAEGSELTRVTLVDSEHKVLIDQLVKPENHIVNYATRWGGITPELLASVDTNLQQVQAMMLQIVGAGDILVGHSLENDLNALKMVHLRCLDTSLLYPHPK-QGRRASLKYL 541
            ++GLDCEMC+TA G ELTRVTLV+    V++D+LVKP N I++Y TR+ GIT ++L+ V T+L+  +A ++++V    +LVGH L+NDL AL+++H  CLDTS+LYPHPK    R++L+YL
Sbjct:    8 LMGLDCEMCITAAGLELTRVTLVNEHDTVVVDELVKPSNPILDYNTRFSGITEDMLSGVTTSLEDARAKVIKVVKDTTMLVGHGLDNDLRALRLLHANCLDTSILYPHPKGPPARSALRYL 128          
BLAST of mRNA_H-elongata_contig66399.14237.1 vs. uniprot
Match: I0Z456_COCSC (Exonuclease domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z456_COCSC)

HSP 1 Score: 139 bits (349), Expect = 6.140e-34
Identity = 81/191 (42.41%), Postives = 108/191 (56.54%), Query Frame = 0
Query:  341 YILTREQLKENEFPVPTAPATKQNGSQPSSLKRLEKAVLPTAESAEDILRGLPELTGMPGYFQTQPLSDGGGEGRDATGPRMLGLDCEMCVTAEGSELTRVTLVDSEHKVLIDQLVKPENHIVNYATRWGGITPELLASVDTNLQQVQAMMLQIVGAGDILVGHSLENDLNALKMVHLRCLDTSLLYPHPK 531
            YI T E LK +E+P+P                              D     PE     GY  T+    GGG+      P ++GLDCEMCVT EG ELTR++LVD + +V++DQLV P+N I +Y TR+ GIT E+LA V T L  +Q   L++V A  +LVGH+L+NDL ALK++H   +DT+ LYPHPK
Sbjct:   42 YIATLEALKSSEYPLPIV--------------------------GPDGKLECPE-----GYIATKA---GGGDEE----PALIGLDCEMCVTEEGFELTRISLVDHQGQVMLDQLVVPDNPITDYNTRYSGITAEMLAPVTTRLADIQVKFLELVPAEALLVGHALQNDLRALKILHANIIDTAFLYPHPK 194          
BLAST of mRNA_H-elongata_contig66399.14237.1 vs. uniprot
Match: A0A3P3YK13_PLABS (Exonuclease domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YK13_PLABS)

HSP 1 Score: 143 bits (360), Expect = 2.480e-33
Identity = 86/212 (40.57%), Postives = 121/212 (57.08%), Query Frame = 0
Query:  332 SSPLPTAETYILTREQLKENEFPVPTAPATKQNGSQPSSLKRLEKAVLPTAESAEDILRGLPELTGMPGYFQTQPLSDGGGEGRDATGPRMLGLDCEMCVTAEGSELTRVTLVDSEHKVLIDQLVKPENHIVNYATRWGGITPELLASVDTNLQQVQAMMLQIVGAGD-ILVGHSLENDLNALKMVHLRCLDTSLLYPHPKQGRRASLKYLV 542
            S+PLP+A +Y LT+E+L  NE+P+PT                                     LT   G+ +  P++D           R+L +DCEMC TA G ELTR+++VD++  VL D LV+P + IV+Y TR+ GIT ELL  V T L++ +  +L ++GA   IL GHSLENDL AL++VH  C+DTS+LYP  + GR+ SL+YL 
Sbjct:  147 SAPLPSASSYRLTQEELIANEYPLPTC------------------------------------LTDD-GWRRAPPVAD-------LASARLLAVDCEMCTTANGLELTRLSVVDADLVVLYDTLVRPASPIVDYNTRYSGITAELLEPVQTTLEEARDRLLALMGAESAILCGHSLENDLRALRIVHDHCIDTSVLYPTGRPGRKHSLRYLA 314          
BLAST of mRNA_H-elongata_contig66399.14237.1 vs. uniprot
Match: A0A8J9RUB8_9CHLO (Small RNA degrading nuclease 5 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RUB8_9CHLO)

HSP 1 Score: 144 bits (362), Expect = 9.640e-33
Identity = 83/191 (43.46%), Postives = 112/191 (58.64%), Query Frame = 0
Query:  341 YILTREQLKENEFPVPTAPATKQNGSQPSSLKRLEKAVLPTAESAEDILRGLPELTGMPGYFQTQPLSDGGGEGRDATGPRMLGLDCEMCVTAEGSELTRVTLVDSEHKVLIDQLVKPENHIVNYATRWGGITPELLASVDTNLQQVQAMMLQIVGAGDILVGHSLENDLNALKMVHLRCLDTSLLYPHPK 531
            YI T + LK +E+P+P                     V PT E A       PE     GY  T+P   G  +      P ++GLDCEMCVT EG ELTR++LVD + +VL+D+LV P+N I +Y TR+ GIT E+LA V T L  +QA  L++V A  +LVGH+L+NDL ALK++H   +DT+ L+PHPK
Sbjct:  220 YIATLDNLKSSEYPLPV--------------------VGPTGELA------CPE-----GYIATRPGPKGDED------PALIGLDCEMCVTEEGFELTRISLVDEQGQVLLDELVVPDNPITDYNTRFSGITAEMLAPVTTRLPDIQAKFLELVPAEALLVGHALQNDLKALKILHANIIDTAFLFPHPK 373          
BLAST of mRNA_H-elongata_contig66399.14237.1 vs. uniprot
Match: A0A7C9ELN5_OPUST (Exonuclease domain-containing protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ELN5_OPUST)

HSP 1 Score: 132 bits (332), Expect = 1.050e-32
Identity = 64/110 (58.18%), Postives = 84/110 (76.36%), Query Frame = 0
Query:  422 MLGLDCEMCVTAEGSELTRVTLVDSEHKVLIDQLVKPENHIVNYATRWGGITPELLASVDTNLQQVQAMMLQIVGAGDILVGHSLENDLNALKMVHLRCLDTSLLYPHPK 531
            ML LDCEMC+T EG ELTRVTLVD + +V++DQLVKP N I++Y TR+ GITPE+L  V T+L+ +Q   L++V    IL+GHSLENDL ALK+ H   +DT++LY HP+
Sbjct:    1 MLALDCEMCITCEGFELTRVTLVDIKGQVVLDQLVKPSNPIIDYNTRYSGITPEMLNGVTTSLKDIQEEFLKLVFKETILIGHSLENDLLALKISHDLVIDTAILYKHPR 110          
BLAST of mRNA_H-elongata_contig66399.14237.1 vs. uniprot
Match: A0A2R6WS50_MARPO (Exonuclease domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WS50_MARPO)

HSP 1 Score: 134 bits (338), Expect = 1.210e-32
Identity = 80/204 (39.22%), Postives = 110/204 (53.92%), Query Frame = 0
Query:  330 DRSSPLPTAETYILTREQLKENEFPVPTAPATKQNGSQPSSLKRLEKAVLPTAESAEDILRGLPELTGMPGYFQTQPLSDGGGEGRDATGPRMLGLDCEMCVTAEGSELTRVTLVDSEHKVLIDQLVKPENHIVNYATRWGGITPELLASVDTNLQQVQAMMLQIVGAGDILVGHSLENDLNALKMVHLRCLDTSLLYPHPKQG 533
            D S+P   A  Y+L++ ++ ++ + +P   +   N   P+                              G+  TQP       GR    P M+ +DCEMC TA G ELTRV+LVD+   VLID LV P N I+NY TR+ GIT   L  V+T L+ +Q   +QIV A  ILVGHSLE DL ALK++H++ +DT+LLY HP+ G
Sbjct:   13 DLSAPTIPASYYVLSKSEMMQHGYRMPAVTSPGTNSQLPA------------------------------GFVMTQPAL-----GRSF--PEMVAVDCEMCRTAAGLELTRVSLVDTNKTVLIDSLVMPTNPILNYNTRYSGITAARLRDVNTTLKDIQEHFIQIVSAETILVGHSLERDLAALKVIHMKVIDTALLYQHPRHG 179          
BLAST of mRNA_H-elongata_contig66399.14237.1 vs. uniprot
Match: A0A6A5AN19_9STRA (Exonuclease domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AN19_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.230e-32
Identity = 69/144 (47.92%), Postives = 97/144 (67.36%), Query Frame = 0
Query:  388 ILRGLPELTGMPGYFQTQPLSDGGGEGRDATGPRMLGLDCEMCVTAEGSELTRVTLVDSEHKVLIDQLVKPENHIVNYATRWGGITPELLASVDTNLQQVQAMMLQIVGAGDILVGHSLENDLNALKMVHLRCLDTSLLYPHPK 531
            I+  +P  T    Y +++PL DG    +    P +L +DCEMC T +G ELTRV++VD +HKV++D+ V P N IV+Y T++ GIT E+L      L  +QA +L ++ A  ILVGHSLENDL+AL+++H R +DT LLYPHPK
Sbjct:  154 IMPVVPSATTDHTYVESKPLEDG----QPLVYP-LLAIDCEMCKTTKGVELTRVSIVDDQHKVVLDEFVLPSNPIVDYCTQYSGITREILDGCTNTLASIQASLLALIPAETILVGHSLENDLSALRLIHRRVIDTVLLYPHPK 292          
BLAST of mRNA_H-elongata_contig66399.14237.1 vs. uniprot
Match: A0A5J5WLS4_GOSBA (Exonuclease domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A5J5WLS4_GOSBA)

HSP 1 Score: 139 bits (351), Expect = 1.280e-32
Identity = 75/146 (51.37%), Postives = 99/146 (67.81%), Query Frame = 0
Query:  398 MPGYFQTQPLSDGGGEGRDATGPRMLGLDCEMCVTAEGSELTRVTLVDSEHKVLIDQLVKPENHIVNYATRWGGITPELLASVDTNLQQVQAMMLQIVGAGDILVGHSLENDLNALKMVHLRCLDTSLLYPHPKQGR-RASLKYLV 542
             PG+  T+P  DG      ++   ML LDCEMC+T+EG ELTRVTLVD E +V++D+LVKP N I +Y TR+ GIT E+L+ V T LQ VQ   L +V    ILVGHSLENDL ALK+ H   +DTS++Y HP+ G  +++L+ L 
Sbjct:  191 QPGFLPTRPAPDG------SSPYEMLALDCEMCITSEGFELTRVTLVDIEGQVVLDKLVKPSNPITDYNTRFSGITHEMLSGVTTTLQNVQEDFLTLVHKDTILVGHSLENDLLALKISHDLIIDTSVIYEHPRGGSYKSALRVLA 330          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66399.14237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNZ2_ECTSI1.210e-9649.61Exonuclease domain-containing protein n=2 Tax=Ecto... [more]
A0A835ZA27_9STRA6.500e-3959.40Exonuclease domain-containing protein n=1 Tax=Trib... [more]
A0A7S1SV13_9CHLO3.730e-3552.89Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
I0Z456_COCSC6.140e-3442.41Exonuclease domain-containing protein n=1 Tax=Cocc... [more]
A0A3P3YK13_PLABS2.480e-3340.57Exonuclease domain-containing protein n=2 Tax=Plas... [more]
A0A8J9RUB8_9CHLO9.640e-3343.46Small RNA degrading nuclease 5 n=1 Tax=Coccomyxa s... [more]
A0A7C9ELN5_OPUST1.050e-3258.18Exonuclease domain-containing protein n=2 Tax=Opun... [more]
A0A2R6WS50_MARPO1.210e-3239.22Exonuclease domain-containing protein n=1 Tax=Marc... [more]
A0A6A5AN19_9STRA1.230e-3247.92Exonuclease domain-containing protein n=1 Tax=Apha... [more]
A0A5J5WLS4_GOSBA1.280e-3251.37Exonuclease domain-containing protein n=4 Tax=Goss... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 421..543
e-value: 2.1E-8
score: 43.9
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 419..544
e-value: 6.7E-34
score: 118.9
NoneNo IPR availablePANTHERPTHR12801EXONUCLEASEcoord: 205..542
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 418..542

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66399contigH-elongata_contig66399:1287..3073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66399.14237.1mRNA_H-elongata_contig66399.14237.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66399 1287..3073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66399.14237.1 ID=prot_H-elongata_contig66399.14237.1|Name=mRNA_H-elongata_contig66399.14237.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=545bp
MASLPKPLGAGDTKKVRRMRKKLQGKASGGSITTYALLRQCESVGVPVKP
LLTPHLERHGHRPTIAAKEARQLILHCAIGAPPPKVANIRNLPAVRATLI
LALTGTAVTAVSRPPNGKGDSVAESVSSAISKMTVSPFNSLEGFSESFRQ
KFRLRAGLRISSGGFSAVSGEGSSEVTGNWLKSLADAFLHAPLGEGSAAC
PDASLSSKKRNTSGGSSNGRRKKLGKGMKRRRREEKKVNKADQAENVLHG
VEGSDASGGEDSDDPCTSNGPSNSSDFEGSGRVESSAAAEIEIEGGEEGE
GGDCKDEGNTGSENKGVEESSDGDSGGDEDRSSPLPTAETYILTREQLKE
NEFPVPTAPATKQNGSQPSSLKRLEKAVLPTAESAEDILRGLPELTGMPG
YFQTQPLSDGGGEGRDATGPRMLGLDCEMCVTAEGSELTRVTLVDSEHKV
LIDQLVKPENHIVNYATRWGGITPELLASVDTNLQQVQAMMLQIVGAGDI
LVGHSLENDLNALKMVHLRCLDTSLLYPHPKQGRRASLKYLVSM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf