prot_H-elongata_contig66303.14230.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66303.14230.1
Unique Nameprot_H-elongata_contig66303.14230.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length159
Homology
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BLAST of mRNA_H-elongata_contig66303.14230.1 vs. uniprot
Match: A0A6H5JCR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR3_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 9.350e-29
Identity = 88/177 (49.72%), Postives = 101/177 (57.06%), Query Frame = 0 
Query:    4 EEDNFLEKARRCMLRAIGISSRKSVLAAESSSG-GSFRVGRT--VPETAEEIEAHQKIKVKMPRRPNKKAMEGAPGSTDLLWTDEQQ--SDEVVEEEGPSPRKDQ---------SSSNVINGIERWVFGSKPERVTP------KAKRVQGAAS--DVSPAPSQGSATKTIHDYVRAM 158
            +E+NF EKARRC+LRAIG+S +       S SG GS R G +  V ETA EI    KIKVKMP+RP KKAM+ A    D  W  EQQ  SD   E EG   + D          SSS VI+GIERWVFG K ER TP            GA+S  +VSPAP     T T+HDYVRAM
Sbjct:  100 QEENFFEKARRCVLRAIGVSRKSGQGEGGSFSGPGSMRGGTSPVVAETAAEIALRHKIKVKMPKRPGKKAMDRA-SVDDHPWDVEQQQGSDPFDESEGVIEKADDESGGYPNRASSSAVISGIERWVFGGKQERTTPIMSPNRNKPATAGASSTAEVSPAPG----TTTMHDYVRAM 271
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BLAST of mRNA_H-elongata_contig66303.14230.1 vs. uniprot
Match: D8LDG6_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG6_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 4.730e-26
Identity = 88/176 (50.00%), Postives = 100/176 (56.82%), Query Frame = 0 
Query:    7 NFLEKARRCMLRAIGISSRKSVLAAESS-SG-GSFRVGRT--VPETAEEIEAHQKIKVKMPRRPNKKAMEGAPGSTDLLWTDEQQS------------DEVVEEEGPSPRKDQSSSNVINGIERWVFGSKPERVTP--------KAKRVQGAASDVSPAPSQGSATKTIHDYVRAM 158
            NF EKARRC+LRAIG+S RKS    E S SG GS R G +  V ETA EI    KIKVKMP+RP KKAM+ A    D  W  EQQ             +E  EE G  P +  SSS VI+GIERWVFG K ER TP         A     + ++VSPAP     T T+HDYVRAM
Sbjct:  952 NFFEKARRCVLRAIGVS-RKSGQGEEGSFSGPGSMRGGNSPIVAETAAEIALRHKIKVKMPKRPGKKAMDRA-SVDDHAWDVEQQEGPDTFDEAEGVIEEADEESGGYPNR-ASSSAVISGIERWVFGGKQERTTPIMSPNRNKPATAGPSSTAEVSPAPG----TTTMHDYVRAM 1120
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66303.14230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JCR3_9PHAE9.350e-2949.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDG6_ECTSI4.730e-2650.00Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66303contigH-elongata_contig66303:1176..2675 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66303.14230.1mRNA_H-elongata_contig66303.14230.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66303 1079..3365 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66303.14230.1 ID=prot_H-elongata_contig66303.14230.1|Name=mRNA_H-elongata_contig66303.14230.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp
MLLEEDNFLEKARRCMLRAIGISSRKSVLAAESSSGGSFRVGRTVPETAE
EIEAHQKIKVKMPRRPNKKAMEGAPGSTDLLWTDEQQSDEVVEEEGPSPR
KDQSSSNVINGIERWVFGSKPERVTPKAKRVQGAASDVSPAPSQGSATKT
IHDYVRAM*
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