prot_H-elongata_contig66258.14224.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66258.14224.1
Unique Nameprot_H-elongata_contig66258.14224.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
BLAST of mRNA_H-elongata_contig66258.14224.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A)

HSP 1 Score: 73.9 bits (180), Expect = 8.530e-15
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    1 MVIAREMDRQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCPLVAQGFRQVKGIHYEESSSPTSAQASIRMVL 81
            + +  E++       W +V RP+G+ V+  + VFKRK++KDG++E+YK  LVA+G+ QV+GI Y+E+ SP     SIR +L
Sbjct:   48 LAMEEELENLKRNETWDIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKETFSPVIKTKSIRTLL 128          
BLAST of mRNA_H-elongata_contig66258.14224.1 vs. uniprot
Match: UPI0015ADBDF9 (uncharacterized protein LOC118188897 n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015ADBDF9)

HSP 1 Score: 73.9 bits (180), Expect = 3.340e-14
Identity = 34/77 (44.16%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    5 REMDRQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCPLVAQGFRQVKGIHYEESSSPTSAQASIRMVL 81
            +E++       W +V RP+G+ V+  + VFKRK++KDG++E+YK  LVA+G+ QV+GI Y+E+ SP     SIR +L
Sbjct:    3 KELENLKRNETWDIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKETFSPVIKTKSIRTLL 79          
BLAST of mRNA_H-elongata_contig66258.14224.1 vs. uniprot
Match: T1IMU7_STRMM (Integrase catalytic domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IMU7_STRMM)

HSP 1 Score: 75.9 bits (185), Expect = 3.510e-14
Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    6 EMDRQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCPLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIA 85
            E+     RG W+++ +P    V+G + ++KRK D  G I KYK  LVAQGF+Q+KGI YEES SP     +IR++L++ A
Sbjct:  479 EIQLHIKRGTWELISKPPMARVIGCKWIYKRKTDPAGHIIKYKARLVAQGFKQIKGIDYEESYSPVVRLTTIRVILALAA 558          
BLAST of mRNA_H-elongata_contig66258.14224.1 vs. uniprot
Match: A0A2I0WG65_9ASPA (Putative mitochondrial protein n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WG65_9ASPA)

HSP 1 Score: 70.5 bits (171), Expect = 5.270e-14
Identity = 31/76 (40.79%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    6 EMDRQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCPLVAQGFRQVKGIHYEESSSPTSAQASIRMVL 81
            E+++     VW++VERPKG++V+GT+ VFK K++  G + + K  LVA+G+ Q++GI +EE+ +P +   +IR++L
Sbjct:    4 ELNQFVRNDVWELVERPKGQSVVGTKWVFKNKVNDSGVVVRNKARLVAKGYNQIEGIDFEETFAPVARLEAIRVLL 79          
BLAST of mRNA_H-elongata_contig66258.14224.1 vs. uniprot
Match: UPI000CD98626 (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD98626)

HSP 1 Score: 70.9 bits (172), Expect = 7.100e-14
Identity = 32/80 (40.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    6 EMDRQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCPLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIA 85
            E++      VWQ+V +PKG T++GTR V+K K+D+ G + K K  LVA+G+ Q++GI Y+E+ +P +   +I + L+  A
Sbjct:    4 ELEEFKRNKVWQIVSKPKGHTIVGTRWVYKNKLDESGAVVKNKARLVAKGYSQLEGIDYDETYAPVARMEAIHIFLAYAA 83          
BLAST of mRNA_H-elongata_contig66258.14224.1 vs. uniprot
Match: A0A075B0V5_ROZAC (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B0V5_ROZAC)

HSP 1 Score: 74.7 bits (182), Expect = 8.970e-14
Identity = 34/78 (43.59%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    6 EMDRQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCPLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSM 83
            E +   + G W+++E P  +  +G++ VFK K ++ G +EKYK  LVAQGF+QVKG+ YEE+ SP +   SIR++L++
Sbjct:  121 EYNALMSNGTWELMELPPDRKAIGSKWVFKTKYNERGEVEKYKARLVAQGFKQVKGVDYEETFSPVAKLNSIRIILAI 198          
BLAST of mRNA_H-elongata_contig66258.14224.1 vs. uniprot
Match: A0A177U095_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U095_9BASI)

HSP 1 Score: 74.7 bits (182), Expect = 9.170e-14
Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    6 EMDRQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCPLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIA 85
            E+D     G W++ E P+G+ V+G+R VFK K+D  G + +YK  LVAQGF Q+ G+ Y+E+ SP +   SIR +L++ A
Sbjct:  629 EIDSHMEMGTWELAELPEGRDVVGSRWVFKLKLDSAGNVARYKGRLVAQGFSQIPGVDYDETYSPVTRFISIRTLLALAA 708          
BLAST of mRNA_H-elongata_contig66258.14224.1 vs. uniprot
Match: UPI00095D65F7 (hypothetical protein n=1 Tax=Listeria monocytogenes TaxID=1639 RepID=UPI00095D65F7)

HSP 1 Score: 72.0 bits (175), Expect = 1.450e-13
Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 0
Query:    6 EMDRQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCPLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIA 85
            E+++   + VW++V RPK K V+GTR VF+ K+D+DG + + K  LVAQG+ Q +GI Y+E+ +P +   +IRM L+  A
Sbjct:   30 ELNQFEQQQVWKLVPRPKNKKVVGTRWVFRNKLDEDGIVIRNKARLVAQGYSQAEGIDYDETYAPVARLEAIRMFLAFAA 109          
BLAST of mRNA_H-elongata_contig66258.14224.1 vs. uniprot
Match: A0A6L2LV04_TANCI (Copia protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LV04_TANCI)

HSP 1 Score: 70.9 bits (172), Expect = 1.470e-13
Identity = 31/76 (40.79%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    6 EMDRQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCPLVAQGFRQVKGIHYEESSSPTSAQASIRMVL 81
            E+++  +  VW+ V  PK  T++GT+ VF+ K+D++G + +YK  LVAQG+ Q +GI Y+E+ +P +   SIR++L
Sbjct:    4 ELNQFISNDVWEFVPNPKDMTIIGTKWVFRNKLDENGVVSRYKARLVAQGYNQQEGIDYDETYAPVARLESIRILL 79          
BLAST of mRNA_H-elongata_contig66258.14224.1 vs. uniprot
Match: A5AI20_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A5AI20_VITVI)

HSP 1 Score: 68.9 bits (167), Expect = 2.240e-13
Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 0
Query:    6 EMDRQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCPLVAQGFRQVKGIHYEESSSPTSAQASIRMVL 81
            E+++     VW++V RP  ++V+GTR VF+ K+D++G I + K  LVAQGF Q +GI Y+E+ SP     +IRM+L
Sbjct:    4 ELNQFERSEVWELVPRPSNQSVIGTRWVFRNKMDENGIIVRNKARLVAQGFNQEEGIDYKETFSPVDRLEAIRMLL 79          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66258.14224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0015A81C6A8.530e-1541.98uncharacterized mitochondrial protein AtMg00820-li... [more]
UPI0015ADBDF93.340e-1444.16uncharacterized protein LOC118188897 n=1 Tax=Stego... [more]
T1IMU7_STRMM3.510e-1445.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A2I0WG65_9ASPA5.270e-1440.79Putative mitochondrial protein n=2 Tax=Dendrobium ... [more]
UPI000CD986267.100e-1440.00uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A075B0V5_ROZAC8.970e-1443.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177U095_9BASI9.170e-1443.75Integrase catalytic domain-containing protein n=2 ... [more]
UPI00095D65F71.450e-1343.75hypothetical protein n=1 Tax=Listeria monocytogene... [more]
A0A6L2LV04_TANCI1.470e-1340.79Copia protein n=1 Tax=Tanacetum cinerariifolium Ta... [more]
A5AI20_VITVI2.240e-1344.74Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 15..83
e-value: 1.2E-15
score: 57.8
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..85
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 6..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66258contigH-elongata_contig66258:7..261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66258.14224.1mRNA_H-elongata_contig66258.14224.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66258 7..2188 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66258.14224.1 ID=prot_H-elongata_contig66258.14224.1|Name=mRNA_H-elongata_contig66258.14224.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
MVIAREMDRQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCP
LVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like