prot_H-elongata_contig66255.14223.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66255.14223.1
Unique Nameprot_H-elongata_contig66255.14223.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length149
Homology
BLAST of mRNA_H-elongata_contig66255.14223.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 1.050e-56
Identity = 91/149 (61.07%), Postives = 114/149 (76.51%), Query Frame = 0
Query:    1 KQGGFKLTKFLDANWGNNPDNGKSTSSYLVFLSSAPIIFKVHLQALMAQSTMEAELAAAALIMKEALFYSNMIKELGFGMRFNTVPLYLDNTSTLHVAGNRTYSPRVKHVVLRYCFVQELVRESQISIHYVKTDDHLADIGNKSLSKNR 149
            K+GGFKL  F D+NW NNPDNGKSTSSYL  L++AP+ F+  LQ L A STMEAEL A+AL MKEA+F SNM+ ELGFG  F  +P+Y DNT+TLH  GNR++S R KH+ LR+ F++ELV E +ISIHY  T+D+LA IG K  +K+R
Sbjct:   51 KKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTKHFNKHR 199          
BLAST of mRNA_H-elongata_contig66255.14223.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 5.160e-55
Identity = 92/149 (61.74%), Postives = 115/149 (77.18%), Query Frame = 0
Query:    1 KQGGFKLTKFLDANWGNNPDNGKSTSSYLVFLSSAPIIFKVHLQALMAQSTMEAELAAAALIMKEALFYSNMIKELGFGMRFNTVPLYLDNTSTLHVAGNRTYSPRVKHVVLRYCFVQELVRESQISIHYVKTDDHLADIGNKSLSKNR 149
            K+GGFKL  F D+NW NNPDNGKSTSSYL  L++AP+ F+  LQ L A STMEAEL A+AL MKEA+F SNM+ ELGFG  F  +P+Y DNT+TLH  GNR++S R KH+ LR+ F++ELV E +ISIHY  T+D+LADIG K  +K+R
Sbjct:  276 KKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHR 424          
BLAST of mRNA_H-elongata_contig66255.14223.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 6.040e-53
Identity = 92/149 (61.74%), Postives = 115/149 (77.18%), Query Frame = 0
Query:    1 KQGGFKLTKFLDANWGNNPDNGKSTSSYLVFLSSAPIIFKVHLQALMAQSTMEAELAAAALIMKEALFYSNMIKELGFGMRFNTVPLYLDNTSTLHVAGNRTYSPRVKHVVLRYCFVQELVRESQISIHYVKTDDHLADIGNKSLSKNR 149
            K+GGFKL  F D+NW NNPDNGKSTSSYL  L++AP+ F+  LQ L A STMEAEL A+AL MKEA+F SNM+ ELG G  F  +P+Y DNT+TLH  GNR++S R KH+ LR+ F++ELV E +ISIHYV T+D+LADIG K  +K+R
Sbjct:  497 KKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHR 645          
BLAST of mRNA_H-elongata_contig66255.14223.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 7.570e-53
Identity = 92/149 (61.74%), Postives = 116/149 (77.85%), Query Frame = 0
Query:    1 KQGGFKLTKFLDANWGNNPDNGKSTSSYLVFLSSAPIIFKVHLQALMAQSTMEAELAAAALIMKEALFYSNMIKELGFGMRFNTVPLYLDNTSTLHVAGNRTYSPRVKHVVLRYCFVQELVRESQISIHYVKTDDHLADIGNKSLSKNR 149
            K+GGFKL  F D+NW NNPDNGKSTSSYL  L++AP+ F+  LQ L A STMEAEL A+AL M EA+F+SNM+ ELGFG  F  +P+Y DNT+TLH  GNR++S R KH+ LR+ F++ELV E +ISIHYV T+D+LADIG K  +K+R
Sbjct: 1505 KKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHR 1653          
BLAST of mRNA_H-elongata_contig66255.14223.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 8.510e-53
Identity = 92/149 (61.74%), Postives = 116/149 (77.85%), Query Frame = 0
Query:    1 KQGGFKLTKFLDANWGNNPDNGKSTSSYLVFLSSAPIIFKVHLQALMAQSTMEAELAAAALIMKEALFYSNMIKELGFGMRFNTVPLYLDNTSTLHVAGNRTYSPRVKHVVLRYCFVQELVRESQISIHYVKTDDHLADIGNKSLSKNR 149
            K+GGFKL  F D+NW NNPDNGKSTSSYL  L++AP+ F+  LQ L A STMEAEL A+AL MKEA+F SNM+ ELGFG  F  +P+Y DNT+TLH  GNR++S R KH+ LR+ F++ELV E +ISIHYV+T+D+LADIG K  + +R
Sbjct:  836 KKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHR 984          
BLAST of mRNA_H-elongata_contig66255.14223.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 1.420e-51
Identity = 91/149 (61.07%), Postives = 117/149 (78.52%), Query Frame = 0
Query:    1 KQGGFKLTKFLDANWGNNPDNGKSTSSYLVFLSSAPIIFKVHLQALMAQSTMEAELAAAALIMKEALFYSNMIKELGFGMRFNTVPLYLDNTSTLHVAGNRTYSPRVKHVVLRYCFVQELVRESQISIHYVKTDDHLADIGNKSLSKNR 149
            K+GGF LT   DANWGNNPDN KS SSY++ +S AP+ FK  LQ+L A ST+EAEL AAAL MKE +F +NM+KELGFG  F + PLY+ NT+TLHV GN+T+S R KHV LR+ +++E+V+E +ISIHY+ T+D+LADIG K L+K R
Sbjct:  530 KRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHLNKQR 677          
BLAST of mRNA_H-elongata_contig66255.14223.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 3.830e-51
Identity = 92/149 (61.74%), Postives = 112/149 (75.17%), Query Frame = 0
Query:    1 KQGGFKLTKFLDANWGNNPDNGKSTSSYLVFLSSAPIIFKVHLQALMAQSTMEAELAAAALIMKEALFYSNMIKELGFGMRFNTVPLYLDNTSTLHVAGNRTYSPRVKHVVLRYCFVQELVRESQISIHYVKTDDHLADIGNKSLSKNR 149
            K+GGFKLT F D+NWGNNPDNGKSTSS+L  L  AP+ FK  LQ+L  QSTME EL AAAL +KEA+F SN++ ELGFG     VPLY DNT+TLH  GNR+YS   KH+ LR+ F++ELV E +I+IHYV  D + ADIG K L+K+R
Sbjct:  559 KRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHLNKDR 707          
BLAST of mRNA_H-elongata_contig66255.14223.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 8.420e-47
Identity = 83/146 (56.85%), Postives = 108/146 (73.97%), Query Frame = 0
Query:    4 GFKLTKFLDANWGNNPDNGKSTSSYLVFLSSAPIIFKVHLQALMAQSTMEAELAAAALIMKEALFYSNMIKELGFGMRFNTVPLYLDNTSTLHVAGNRTYSPRVKHVVLRYCFVQELVRESQISIHYVKTDDHLADIGNKSLSKNR 149
            G KL  F ++NW NNPDNGKS+S YL  L +AP+ FK  +Q   A STMEAEL A+AL MKEA+F SN++ ELG G  F  VPLY DNT+TLH  GNR++S R KH+ LR+ +++EL+ E +ISIHY+ TD ++ADIG K L+K+R
Sbjct: 1009 GSKLATFSESNWANNPDNGKSSSCYLTMLGNAPVSFKSGIQGPTAMSTMEAELIASALAMKEAVFCSNILTELGLGKEFAQVPLYCDNTATLHALGNRSFSSRTKHIALRFFYIRELISEGRISIHYIPTDSNIADIGTKHLNKHR 1154          
BLAST of mRNA_H-elongata_contig66255.14223.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 1.570e-46
Identity = 88/147 (59.86%), Postives = 104/147 (70.75%), Query Frame = 0
Query:    1 KQGGFKLTKFLDANWGNNPDNGKSTSSYLVFLSSAPIIFKVHLQALMAQSTMEAELAAAALIMKEALFYSNMIKELGFGMRFNTVPLYLDNTSTLHVAGNRTYSPRVKHVVLRYCFVQELVRESQISIHYVKTDDHLADIGNKSLSK 147
            K  GFKL  F D NW NNPDNGKSTS Y   L  AP+  K  +Q   A STMEAEL A+AL MKEA+F SNM+ ELGFG  F  VPLY DNT+TLH  GNR++S R  H+ LR+ +++ELV E +ISIHYV TD +LADIG K L+K
Sbjct: 1034 KSEGFKLGTFSDTNWANNPDNGKSTSCYWTMLEHAPVSLKSGIQGPAAISTMEAELIASALAMKEAVFCSNMLTELGFGKEFAQVPLYCDNTATLHALGNRSFSSRENHIALRFFYIRELVLEGRISIHYVPTDSNLADIGTKYLNK 1180          
BLAST of mRNA_H-elongata_contig66255.14223.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.060e-44
Identity = 80/129 (62.02%), Postives = 99/129 (76.74%), Query Frame = 0
Query:    1 KQGGFKLTKFLDANWGNNPDNGKSTSSYLVFLSSAPIIFKVHLQALMAQSTMEAELAAAALIMKEALFYSNMIKELGFGMRFNTVPLYLDNTSTLHVAGNRTYSPRVKHVVLRYCFVQELVRESQISIH 129
            K+GGFKLT F DANW +NPDN +STSSY++ +S AP+ FK  LQ L   STMEAEL AAAL MKEA+F SNM+ ELGFG +F  VPLY++NT+TLHV GN+ YS R KH+ L +  V+ELV+E  I+IH
Sbjct:  372 KRGGFKLTAFSDANWESNPDNARSTSSYMIMMSKAPVSFKTGLQDLTVMSTMEAELLAAALTMKEAVFCSNMMTELGFGQQFGQVPLYINNTATLHVIGNQAYSSRTKHIALLFFCVRELVKEGAITIH 500          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66255.14223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMK0_9PHAE1.050e-5661.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE5.160e-5561.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JME8_9PHAE6.040e-5361.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE7.570e-5361.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNH5_9PHAE8.510e-5361.74Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBU1_9PHAE1.420e-5161.07CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JG39_9PHAE3.830e-5161.74Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K129_9PHAE8.420e-4756.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBV6_9PHAE1.570e-4659.86Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5J6N1_9PHAE1.060e-4462.02Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 6..129
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66255contigH-elongata_contig66255:414..860 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66255.14223.1mRNA_H-elongata_contig66255.14223.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66255 414..860 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66255.14223.1 ID=prot_H-elongata_contig66255.14223.1|Name=mRNA_H-elongata_contig66255.14223.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bp
KQGGFKLTKFLDANWGNNPDNGKSTSSYLVFLSSAPIIFKVHLQALMAQS
TMEAELAAAALIMKEALFYSNMIKELGFGMRFNTVPLYLDNTSTLHVAGN
RTYSPRVKHVVLRYCFVQELVRESQISIHYVKTDDHLADIGNKSLSKNR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like