prot_H-elongata_contig66198.14213.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66198.14213.1
Unique Nameprot_H-elongata_contig66198.14213.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length89
Homology
BLAST of mRNA_H-elongata_contig66198.14213.1 vs. uniprot
Match: D7FJM8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJM8_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 2.440e-37
Identity = 73/85 (85.88%), Postives = 78/85 (91.76%), Query Frame = 0
Query:    1 MPRSADSYIHRVGRTARAGCGGCSVTLIGESRRIVMKEVLKTQGCEVEIKSRAVPQSAIDHYRSKIEGLESSVKDIFAEEKVRRD 85
            MPRSADSYIHRVGRTARAGCGG SVTLIGESRRIVMKEVLKTQG  VEIKSRAVPQSAIDH+RSKIEG+E+SVK I  EEKV ++
Sbjct:  630 MPRSADSYIHRVGRTARAGCGGRSVTLIGESRRIVMKEVLKTQGEGVEIKSRAVPQSAIDHFRSKIEGMEASVKAILTEEKVEKE 714          
BLAST of mRNA_H-elongata_contig66198.14213.1 vs. uniprot
Match: A0A835YJC4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJC4_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.540e-30
Identity = 61/85 (71.76%), Postives = 70/85 (82.35%), Query Frame = 0
Query:    1 MPRSADSYIHRVGRTARAGCGGCSVTLIGESRRIVMKEVLKTQGCEVEIKSRAVPQSAIDHYRSKIEGLESSVKDIFAEEKVRRD 85
            MPRS D+YIHRVGRTARAGCGG SVTLIGESRR+VMK+VLK Q  + E+KSRAVPQS IDHYRSKI+ LE  V  I  EEK+ ++
Sbjct:  608 MPRSRDTYIHRVGRTARAGCGGRSVTLIGESRRLVMKDVLKIQAEKAEVKSRAVPQSVIDHYRSKIDMLEDEVAAIMREEKLEKE 692          
BLAST of mRNA_H-elongata_contig66198.14213.1 vs. uniprot
Match: A0A7S2V390_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V390_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.260e-17
Identity = 46/97 (47.42%), Postives = 61/97 (62.89%), Query Frame = 0
Query:    1 MPRSADSYIHRVGRTARAGCGGCSVTLIGESRRIVMKEVLKTQGCEVE------------IKSRAVPQSAIDHYRSKIEGLESSVKDIFAEEKVRRD 85
            MPR+  +YIHRVGR+ARAG  G +VTL+GE RR VMKEVL+                   +KSR VPQS +DH+R KI+ LE  +K I  EE++ ++
Sbjct:  381 MPRTRTTYIHRVGRSARAGKSGRAVTLVGEGRRAVMKEVLRHHXXXXXXXXXXXXXXXSMMKSRTVPQSVVDHFRLKIKALEPEIKKILDEEQMEKE 477          
BLAST of mRNA_H-elongata_contig66198.14213.1 vs. uniprot
Match: A0A2G8KK60_STIJA (RNA helicase n=2 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KK60_STIJA)

HSP 1 Score: 83.2 bits (204), Expect = 1.120e-16
Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    1 MPRSADSYIHRVGRTARAGCGGCSVTLIGESRRIVMKEVLKTQGCEVEIKSRAVPQSAIDHYRSKIEGLESSVKDIF 77
            MP +A  Y+HRVGRTARAG GG SV+LIGES R ++K+++K    +  +KSR VP   ++ YR KI+ LE  +K +F
Sbjct:  516 MPNTAQHYVHRVGRTARAGKGGRSVSLIGESERRMLKDIIKQS--KTAVKSRTVPHEVVERYRDKIDSLEEDIKTVF 590          
BLAST of mRNA_H-elongata_contig66198.14213.1 vs. uniprot
Match: A0A0W4ZT03_PNEC8 (Uncharacterized protein n=1 Tax=Pneumocystis carinii (strain B80) TaxID=1408658 RepID=A0A0W4ZT03_PNEC8)

HSP 1 Score: 82.4 bits (202), Expect = 2.060e-16
Identity = 39/84 (46.43%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    2 PRSADSYIHRVGRTARAGCGGCSVTLIGESRRIVMKEVLKT-QGCEVEIKSRAVPQSAIDHYRSKIEGLESSVKDIFAEEKVRR 84
            P+S D+Y+HR+GRTARAGC G ++TL+GE  R +MK  +K  Q  E  +++RA+P   ID Y +K++ LES++++I  EEK  +
Sbjct:  500 PQSFDTYLHRIGRTARAGCNGIAITLVGEEDRKIMKIAMKIGQKYENILRNRAIPWDLIDTYHTKLQNLESTIQNILIEEKQEK 583          
BLAST of mRNA_H-elongata_contig66198.14213.1 vs. uniprot
Match: UPI000A2A8E74 (probable ATP-dependent RNA helicase DDX27 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8E74)

HSP 1 Score: 82.4 bits (202), Expect = 2.060e-16
Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 0
Query:    1 MPRSADSYIHRVGRTARAGCGGCSVTLIGESRRIVMKEVLKTQGCEVEIKSRAVPQSAIDHYRSKIEGLESSVKDIFAEEKVRRD 85
            MP +   Y+HRVGRTARAG  G SVTL+GE  R  +KEV+K      ++KSR +P   I+ Y SK+E LE+ +KDI  +E   ++
Sbjct:  376 MPTNVKQYVHRVGRTARAGKSGRSVTLVGEKERKSLKEVVKNS--RTQVKSRIIPPEVIEKYSSKVEALEADIKDILKQENEEKE 458          
BLAST of mRNA_H-elongata_contig66198.14213.1 vs. uniprot
Match: A0A8K1CFP2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFP2_PYTOL)

HSP 1 Score: 82.4 bits (202), Expect = 2.100e-16
Identity = 41/84 (48.81%), Postives = 59/84 (70.24%), Query Frame = 0
Query:    1 MPRSADSYIHRVGRTARAGCGGCSVTLIGESRRIVMKEVLKTQGCEVEIKSRAVPQSAIDHYRSKIEGLESSVKDIFAEEKVRR 84
            MP+   +Y+HRVGRTARAG  G +VTL  ESRR++MK+V  ++ C   +KSRAVP   I  ++++IEG+E+ +K I  EE + R
Sbjct:  574 MPKDLTTYVHRVGRTARAGRNGRAVTLTSESRRLLMKQV--SRHCHGFVKSRAVPDPVIAQWKARIEGMENDIKQIMHEETLER 655          
BLAST of mRNA_H-elongata_contig66198.14213.1 vs. uniprot
Match: A0A662YB28_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YB28_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.860e-16
Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 0
Query:    1 MPRSADSYIHRVGRTARAGCGGCSVTLIGESRRIVMKEVLKTQGCEVEIKSRAVPQSAIDHYRSKIEGLESSVKDIFAEEKVRR 84
            MP+   +Y+HRVGRTARAG  G +VTL  ESRR+VMK+V  ++ C+  +KSRAVP   I  ++++IEG++  VK +  EE + +
Sbjct:  573 MPKDITTYVHRVGRTARAGRNGRAVTLTSESRRLVMKQV--SRHCQGFVKSRAVPDPVITQWKARIEGMQEDVKQVMHEETLEK 654          
BLAST of mRNA_H-elongata_contig66198.14213.1 vs. uniprot
Match: A0A482SS31_9ARCH (DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS31_9ARCH)

HSP 1 Score: 81.3 bits (199), Expect = 5.290e-16
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    1 MPRSADSYIHRVGRTARAGCGGCSVTLIGESRRIVMKEVLKTQGCEV------EIKSRAVPQSAIDHYRSKIEGLESSVKDIFAEEKVR 83
            MPR   +Y+HRVGRTARAGCGG ++TL+ + RR VMKEVLK +G ++      +I SR +  S + HY +K+  +E  V+     EK R
Sbjct:  405 MPRDVSTYVHRVGRTARAGCGGRAITLVSDERRKVMKEVLKGEGGKMSSEQGGQILSRTIASSVLVHYSAKMASIEEQVEGYLETEKDR 493          
BLAST of mRNA_H-elongata_contig66198.14213.1 vs. uniprot
Match: A0A6P8H1L7_ACTTE (RNA helicase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H1L7_ACTTE)

HSP 1 Score: 81.3 bits (199), Expect = 5.290e-16
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    1 MPRSADSYIHRVGRTARAGCGGCSVTLIGESRRIVMKEVLKTQGCEVEIKSRAVPQSAIDHYRSKIEGLESSVKDIFAEEKVRRD 85
            MP +   Y+HRVGRTARAG  G SV+L+GE  R  +KEV+K      ++KSR VP   I+ Y SK+E LE+ +KDI  +E+  ++
Sbjct:  486 MPTNVKQYVHRVGRTARAGKSGRSVSLVGEKERKSLKEVVKNS--RTQVKSRIVPPEIIEKYASKVEALEADIKDILKQEEEEKE 568          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66198.14213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJM8_ECTSI2.440e-3785.88DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YJC4_9STRA2.540e-3071.76P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2V390_9STRA1.260e-1747.42Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2G8KK60_STIJA1.120e-1650.65RNA helicase n=2 Tax=Stichopus japonicus TaxID=307... [more]
A0A0W4ZT03_PNEC82.060e-1646.43Uncharacterized protein n=1 Tax=Pneumocystis carin... [more]
UPI000A2A8E742.060e-1647.06probable ATP-dependent RNA helicase DDX27 n=1 Tax=... [more]
A0A8K1CFP2_PYTOL2.100e-1648.81Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662YB28_9STRA2.860e-1647.62Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A482SS31_9ARCH5.290e-1646.07DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906... [more]
A0A6P8H1L7_ACTTE5.290e-1647.06RNA helicase n=1 Tax=Actinia tenebrosa TaxID=6105 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..87
e-value: 2.6E-12
score: 48.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66198contigH-elongata_contig66198:1135..2805 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66198.14213.1mRNA_H-elongata_contig66198.14213.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66198 1108..2805 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66198.14213.1 ID=prot_H-elongata_contig66198.14213.1|Name=mRNA_H-elongata_contig66198.14213.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
MPRSADSYIHRVGRTARAGCGGCSVTLIGESRRIVMKEVLKTQGCEVEIK
SRAVPQSAIDHYRSKIEGLESSVKDIFAEEKVRRDNYA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase