prot_H-elongata_contig66097.14201.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig66097.14201.1
Unique Nameprot_H-elongata_contig66097.14201.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length144
Homology
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BLAST of mRNA_H-elongata_contig66097.14201.1 vs. uniprot
Match: D8LBX9_ECTSI (Similar to dedicator of cytokinesis n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX9_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 2.170e-17
Identity = 53/108 (49.07%), Postives = 64/108 (59.26%), Query Frame = 0 
Query:    1 VSKGLKWVQSWRAEGETGNGEQGQAMSPRGRRSGPRRSSIFGSPLKI-DETLVQDNVEVDLGR-GTPPXXXXXXXXXXGLSTSELRRKSPSSGGTLESSFGIGILGRG 106
            VSKGLKWVQSWRAEG+TG+GEQGQ MSPRGR++GPRRSSIFGSP     ET  + + E      G+            G +     R S       +S+FG  I+GRG
Sbjct:  575 VSKGLKWVQSWRAEGQTGSGEQGQVMSPRGRKAGPRRSSIFGSPFYDGQETEQRSDPETSTAACGSSSTRVAGVGCRAGKNGHRRSRSS------FDSNFGTPIVGRG 676
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66097.14201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBX9_ECTSI2.170e-1749.07Similar to dedicator of cytokinesis n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig66097contigH-elongata_contig66097:739..1891 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig66097.14201.1mRNA_H-elongata_contig66097.14201.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig66097 738..1891 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig66097.14201.1 ID=prot_H-elongata_contig66097.14201.1|Name=mRNA_H-elongata_contig66097.14201.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp
VSKGLKWVQSWRAEGETGNGEQGQAMSPRGRRSGPRRSSIFGSPLKIDET
LVQDNVEVDLGRGTPPAPQPQQQQQQGLSTSELRRKSPSSGGTLESSFGI
GILGRGSLSRGSDVLPNTNSNKSSNTSSNSNSNSNSNSSNGVFS
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