prot_H-elongata_contig6604.14195.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6604.14195.1
Unique Nameprot_H-elongata_contig6604.14195.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
BLAST of mRNA_H-elongata_contig6604.14195.1 vs. uniprot
Match: A0A6S7K883_PARCT (RNA-directed DNA polymerase from mobile element jockey-like (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K883_PARCT)

HSP 1 Score: 74.3 bits (181), Expect = 2.040e-13
Identity = 35/99 (35.35%), Postives = 54/99 (54.55%), Query Frame = 0
Query:    3 PYLEVLLRTDCECVEAAVMKRILHYAGRVARMYDDRLPNIIMRGEMVGGKRKRGQPAKRLEHRVTEYCTAFGIDPKCWMRAAQDAPEWHRKVETGAEVF 101
            P+ EVL R  C  VE+ + KR L +AG + RM D+RLP I++ GE+  G R  G+P KR +  + +   +  +  + W   A+D   W   + TG + F
Sbjct:  275 PHSEVLERAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKRYKDSLKDALKSCNVPLQSWETRAEDRASWRTAIHTGVQSF 373          
BLAST of mRNA_H-elongata_contig6604.14195.1 vs. uniprot
Match: A0A7D9M5G6_PARCT (RNA-directed DNA polymerase from mobile element jockey-like (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M5G6_PARCT)

HSP 1 Score: 74.3 bits (181), Expect = 2.280e-13
Identity = 35/99 (35.35%), Postives = 54/99 (54.55%), Query Frame = 0
Query:    3 PYLEVLLRTDCECVEAAVMKRILHYAGRVARMYDDRLPNIIMRGEMVGGKRKRGQPAKRLEHRVTEYCTAFGIDPKCWMRAAQDAPEWHRKVETGAEVF 101
            P+ EVL R  C  VE+ + KR L +AG + RM D+RLP I++ GE+  G R  G+P KR +  + +   +  +  + W   A+D   W   + TG + F
Sbjct:  561 PHSEVLERAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKRYKDSLKDALKSCNVPLQSWETRAEDRASWRTAIHTGVQSF 659          
BLAST of mRNA_H-elongata_contig6604.14195.1 vs. uniprot
Match: A0A8C5PP25_9ANUR (Reverse transcriptase domain-containing protein n=10 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5PP25_9ANUR)

HSP 1 Score: 74.3 bits (181), Expect = 2.320e-13
Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 0
Query:    3 PYLEVLLRTDCECVEAAVMKRILHYAGRVARMYDDRLPNIIMRGEMVGGKRKRGQPAKRLEHRVTEYCTAFGIDPKCWMRAAQDAPEWHRKVETGAEVF 101
            P  EVL+R D   +   + +  L +AG VARM D+RLP +++ GE+  GKR +G   KR +  +     AF I+P  W  AAQD  +W   ++ GA+ +
Sbjct:  813 PDTEVLVRADLPSIFTILAQSQLRWAGHVARMKDNRLPKMLLFGELTQGKRSQGGQKKRYKDTLKAALKAFNINPINWELAAQDKIKWRSAIKNGAQSY 911          
BLAST of mRNA_H-elongata_contig6604.14195.1 vs. uniprot
Match: A0A6S7JKI9_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JKI9_PARCT)

HSP 1 Score: 72.4 bits (176), Expect = 6.040e-13
Identity = 34/99 (34.34%), Postives = 53/99 (53.54%), Query Frame = 0
Query:    3 PYLEVLLRTDCECVEAAVMKRILHYAGRVARMYDDRLPNIIMRGEMVGGKRKRGQPAKRLEHRVTEYCTAFGIDPKCWMRAAQDAPEWHRKVETGAEVF 101
            P+ EVL R  C  VE+ + KR L +AG + RM D+RLP I++ GE+  G R  G+P KR +  + +   +  +  + W   A+D   W   + TG  + 
Sbjct:  208 PHSEVLERAKCCSVESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKRYKDSLKDALKSCNVPLQSWETRAEDRASWRTAIHTGGSMI 306          
BLAST of mRNA_H-elongata_contig6604.14195.1 vs. uniprot
Match: A0A8J9Z756_BRALA (Hypp8133 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9Z756_BRALA)

HSP 1 Score: 62.0 bits (149), Expect = 2.340e-9
Identity = 32/99 (32.32%), Postives = 48/99 (48.48%), Query Frame = 0
Query:    2 LPYLEVLLRTDCECVEAAVMKRILHYAGRVARMYDDRLPNIIMRGEMVGGKRKRGQPAKRLEHRVTEYCTAFGIDPKCWMRAAQDAPEWHRKVETGAEV 100
            +P  EVL R +   V   + K    +AG V RM D R+P +++ GE+  GKR  G+P  R +  +     +  I    W   A D P+W   V  GA++
Sbjct:   89 IPDTEVLTRANMLSVHTLLEKARARWAGHVRRMDDQRIPKVLLYGELAVGKRPLGRPKLRYKDNLKATLKSLSIPMDSWEVIAADRPQWRGAVHQGAQL 187          
BLAST of mRNA_H-elongata_contig6604.14195.1 vs. uniprot
Match: A0A6S7JBE9_PARCT (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JBE9_PARCT)

HSP 1 Score: 58.9 bits (141), Expect = 5.600e-8
Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    3 PYLEVLLRTDCECVEAAVMKRILHYAGRVARMYDDRLPNIIMRGEMVGGKRKRGQPAKRLEH 64
            P+ EVL R  C  +E+ + KR L +AG + RM D+RLP I++ GE+  G R  G+P KR  H
Sbjct:  291 PHSEVLERAKCCSIESILKKRQLQWAGHIVRMDDERLPKILLYGELQQGNRMVGRPRKRTSH 352          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6604.14195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6S7K883_PARCT2.040e-1335.35RNA-directed DNA polymerase from mobile element jo... [more]
A0A7D9M5G6_PARCT2.280e-1335.35RNA-directed DNA polymerase from mobile element jo... [more]
A0A8C5PP25_9ANUR2.320e-1337.37Reverse transcriptase domain-containing protein n=... [more]
A0A6S7JKI9_PARCT6.040e-1334.34Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A8J9Z756_BRALA2.340e-932.32Hypp8133 protein n=1 Tax=Branchiostoma lanceolatum... [more]
A0A6S7JBE9_PARCT5.600e-845.16Reverse transcriptase domain-containing protein (F... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 9..98
NoneNo IPR availablePANTHERPTHR47027:SF4coord: 9..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6604contigH-elongata_contig6604:174..476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6604.14195.1mRNA_H-elongata_contig6604.14195.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6604 168..476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6604.14195.1 ID=prot_H-elongata_contig6604.14195.1|Name=mRNA_H-elongata_contig6604.14195.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MLPYLEVLLRTDCECVEAAVMKRILHYAGRVARMYDDRLPNIIMRGEMVG
GKRKRGQPAKRLEHRVTEYCTAFGIDPKCWMRAAQDAPEWHRKVETGAEV
F
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