prot_H-elongata_contig6601.14190.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig6601.14190.1
Unique Name	prot_H-elongata_contig6601.14190.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	164

Homology

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BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: D7G0B9_ECTSI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B9_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 8.730e-95
Identity = 143/166 (86.14%), Postives = 155/166 (93.37%), Query Frame = 0

Query:    1 MERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKL--EGPSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 164
            MERMY+RREMYLSIMMDR SQGPVIVACPDGGTSIEDLAESNPELI+KE VD+M GLTD QA KIA+HLKL  +GPS++AGKTLLKNMY MF E+DCTLVEINPLAET +GRVMACDAKLNFDDNAEWRQK+TF FRD+TQED+REVEAAKYDLNYIGLTGNIGCM
Sbjct:  155 MERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKTLLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCM 320

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BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: A0A835YQF4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF4_9STRA)

HSP 1 Score: 239 bits (611), Expect = 7.360e-75
Identity = 119/166 (71.69%), Postives = 141/166 (84.94%), Query Frame = 0

Query:    1 MERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEG--PSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 164
            MER+Y+RREMYLSIMMDR  +GPV+VAC  GGTSIEDLAE +PEL++K  V + +GLT+ QA KIAKHL+L    P++D G T+LKN+Y MF +KDCTLVE+NPLAET DGRV+ACDAKLNFDDNA +RQK+ F  RD++QED REVEAAKYDLNYIGLTGNIGCM
Sbjct:  149 MERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCM 314

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BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: A0A7S3XRL5_HETAK (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL5_HETAK)

HSP 1 Score: 220 bits (561), Expect = 6.340e-68
Identity = 113/166 (68.07%), Postives = 135/166 (81.33%), Query Frame = 0

Query:    1 MERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKL-EG-PSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 164
            MER+Y+RREMYLS+M+DR +QGP++VA P GGTSIED+AE  PELI  + +D+MEGLTD QA+K+A +L + EG PS      L+KN+Y MF E D T VEINPLAET+ G VM  DAKLNFDDNAE+RQKE  A+RDFTQED REVEAAK+DLNYIGL+GNIGCM
Sbjct:   99 MERVYMRREMYLSLMLDRGTQGPLMVASPCGGTSIEDVAEQTPELIFTQPIDIMEGLTDAQASKMATNLGMVEGSPSHSDAIALMKNLYTMFIETDATQVEINPLAETSTGEVMCADAKLNFDDNAEFRQKEVHAYRDFTQEDPREVEAAKFDLNYIGLSGNIGCM 264

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BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: A0A485KYE4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KYE4_9STRA)

HSP 1 Score: 218 bits (556), Expect = 8.190e-67
Identity = 110/164 (67.07%), Postives = 130/164 (79.27%), Query Frame = 0

Query:    1 MERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEGPSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 164
            MER+Y+RREMY SI+MDRASQGPV+VA P GGTSIED+A + PELI KE +D+M G TD Q  ++A ++ LEG S   G  LL N+Y MF   D TLVEINPLAET DG+V ACDAK+NFDDNA +RQK+ FA RD TQED+REVEA+ YDLNYIGL GNIGC+
Sbjct:  132 MERVYMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAHATPELIFKENIDIMTGPTDEQLKRLASNMGLEGVSLTRGVELLGNLYKMFIGVDATLVEINPLAETPDGKVFACDAKINFDDNAAFRQKDIFAKRDKTQEDAREVEASAYDLNYIGLDGNIGCL 295

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BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: A0A6T6HZE5_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6HZE5_9STRA)

HSP 1 Score: 217 bits (552), Expect = 4.180e-66
Identity = 107/166 (64.46%), Postives = 132/166 (79.52%), Query Frame = 0

Query:    1 MERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEG--PSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 164
            MERMY+RREMYLSI+MDRASQGP++V  P GGT+IED+A+SNPE+I  E +D++EG+   Q  ++A +L LE   PS +   TL+KN+Y MF + DCT VE+NPLAET +G V+ CDAK+NFD NAE+RQ   F  RDFTQEDSREVEA+KYDLNYIGL GNIGCM
Sbjct:  139 MERMYMRREMYLSILMDRASQGPLLVGSPRGGTAIEDIAKSNPEVIFTEPIDIVEGIQQDQCERMATNLGLEAGSPSHENAITLMKNLYSMFTQCDCTQVEVNPLAETPEGDVVVCDAKVNFDSNAEYRQSSIFDKRDFTQEDSREVEASKYDLNYIGLDGNIGCM 304

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BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: H3GTW5_PHYRM (ATP-grasp domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTW5_PHYRM)

HSP 1 Score: 210 bits (535), Expect = 3.920e-65
Identity = 107/164 (65.24%), Postives = 128/164 (78.05%), Query Frame = 0

Query:    1 MERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEGPSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 164
            MER+++RREMY SI+MDRASQGPV+VA P GGTSIED+AE+ PELI KE+VD+  G TD Q +++AK L  EG      +T +KN+Y MF   D TLVEINPLAET +G + ACDAKLN+DDNA +R KE FA RD TQED REVEA+ YDLNYIGL GNIGC+
Sbjct:  134 MERVWMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAEATPELIFKESVDISTGPTDEQVSRLAKALGGEGAVLKKLETQIKNLYNMFIGVDATLVEINPLAETREGEIFACDAKLNYDDNAAFRHKEIFAKRDKTQEDPREVEASSYDLNYIGLDGNIGCL 297

[Close]

BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: A0A024T9H2_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9H2_9STRA)

HSP 1 Score: 213 bits (543), Expect = 7.060e-65
Identity = 107/164 (65.24%), Postives = 129/164 (78.66%), Query Frame = 0

Query:    1 MERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEGPSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 164
            MER+Y+RREMY SI+MDRASQGPV+V  P GGTSIED+A + PELI KE VD+M G T+ Q  ++AK++ L+GP+   G  LL N+Y MF   D T VEINPLAET +G+V ACDAK+NFDDNA +RQ E FA RD TQED+REVEA+ YDLNYIGL GNIGC+
Sbjct:  131 MERVYLRREMYFSILMDRASQGPVLVGSPAGGTSIEDVAHNTPELIFKEHVDIMTGPTNEQLTRLAKNMGLDGPALPRGVELLGNLYKMFIGVDATQVEINPLAETPEGQVFACDAKINFDDNAAFRQAEIFAQRDKTQEDAREVEASAYDLNYIGLDGNIGCL 294

[Close]

BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: W7TUJ9_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUJ9_9STRA)

HSP 1 Score: 212 bits (540), Expect = 2.480e-64
Identity = 111/165 (67.27%), Postives = 130/165 (78.79%), Query Frame = 0

Query:    2 ERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEG--PSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 164
            ER+Y+RREMYLSIMMDR +QGP+IVA P GGTSIED+A SNPE I  E +D+MEGL++  AA IA  + LE    +  AG  L+K +Y M    D TLVEINPLAET DGR++A DAKLNFDDNAE+RQK+ FA RD+TQED REVEA KYDLNYIGL+GNIGCM
Sbjct:  135 ERLYMRREMYLSIMMDRTTQGPMIVASPVGGTSIEDVAASNPEKIFTEPIDIMEGLSEEAAAGIATKIGLEPGTATHAAGADLVKRLYKMMIATDATLVEINPLAETNDGRIVAADAKLNFDDNAEYRQKQIFAKRDYTQEDPREVEAHKYDLNYIGLSGNIGCM 299

[Close]

BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: A0A0W8DSX0_PHYNI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DSX0_PHYNI)

HSP 1 Score: 211 bits (537), Expect = 2.480e-64
Identity = 108/164 (65.85%), Postives = 128/164 (78.05%), Query Frame = 0

Query:    1 MERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEGPSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 164
            MER+++RREMY SI+MDRASQGPV+VA P GGTSIED+AE+ PELI KE+VD+  G TD Q A++AK L  EG      +T +KN+Y MF   D TLVEINPLAET +G + ACDAKLN+DDNA +R KE FA RD TQED REVEA+ YDLNYIGL GNIGC+
Sbjct:  101 MERVWMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAEATPELIFKESVDISTGPTDEQVARLAKALGGEGEVLKKLETQIKNLYNMFIGVDATLVEINPLAETREGEIFACDAKLNYDDNAAFRHKEIFAKRDKTQEDPREVEASAYDLNYIGLDGNIGCL 264

[Close]

BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Match: K3WN63_GLOUD (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WN63_GLOUD)

HSP 1 Score: 211 bits (536), Expect = 8.070e-64
Identity = 105/163 (64.42%), Postives = 131/163 (80.37%), Query Frame = 0

Query:    2 ERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKETVDVMEGLTDFQAAKIAKHLKLEGPSFDAGKTLLKNMYGMFAEKDCTLVEINPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKYDLNYIGLTGNIGCM 164
            ER+Y+RREMY SI+MDRASQGPVIVA P GGTSIED+A + PELI  E VD+++G+TD Q A++AK+L ++  S    + +++N+Y +F   D TLVEINPLAETADG++ ACDAKLNFDDNA +R KE F  RD +QED REVEAA+YDLNYIGL GNIGC+
Sbjct:  135 ERVYMRREMYFSILMDRASQGPVIVASPAGGTSIEDVAAATPELIFTEKVDIVKGVTDEQVARLAKNLGVDDSSVPKLEEMIRNLYNLFIGVDATLVEINPLAETADGQIYACDAKLNFDDNAGFRHKEIFDQRDKSQEDPREVEAAEYDLNYIGLDGNIGCL 297

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot

BLAST of mRNA_H-elongata_contig6601.14190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G0B9_ECTSI	8.730e-95	86.14	Succinate--CoA ligase [ADP-forming] subunit beta, ...	[more]
A0A835YQF4_9STRA	7.360e-75	71.69	Succinate--CoA ligase [ADP-forming] subunit beta, ...	[more]
A0A7S3XRL5_HETAK	6.340e-68	68.07	Succinate--CoA ligase [ADP-forming] subunit beta, ...	[more]
A0A485KYE4_9STRA	8.190e-67	67.07	Succinate--CoA ligase [ADP-forming] subunit beta, ...	[more]
A0A6T6HZE5_9STRA	4.180e-66	64.46	Succinate--CoA ligase [ADP-forming] subunit beta, ...	[more]
H3GTW5_PHYRM	3.920e-65	65.24	ATP-grasp domain-containing protein n=1 Tax=Phytop...	[more]
A0A024T9H2_9STRA	7.060e-65	65.24	Succinate--CoA ligase [ADP-forming] subunit beta, ...	[more]
W7TUJ9_9STRA	2.480e-64	67.27	Succinate--CoA ligase [ADP-forming] subunit beta, ...	[more]
A0A0W8DSX0_PHYNI	2.480e-64	65.85	Succinate--CoA ligase [ADP-forming] subunit beta, ...	[more]
K3WN63_GLOUD	8.070e-64	64.42	Succinate--CoA ligase [ADP-forming] subunit beta, ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.470.20		coord: 1..141 e-value: 2.0E-54 score: 185.4
None	No IPR available	SUPERFAMILY	56059	Glutathione synthetase ATP-binding domain-like	coord: 2..140
IPR013650	ATP-grasp fold, succinyl-CoA synthetase-type	PFAM	PF08442	ATP-grasp_2	coord: 2..104 e-value: 2.2E-31 score: 109.0
IPR005809	Succinate--CoA synthetase, beta subunit	PANTHER	PTHR11815	SUCCINYL-COA SYNTHETASE BETA CHAIN	coord: 2..164

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig6601	contig	H-elongata_contig6601:43..9649 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig6601.14190.1	mRNA_H-elongata_contig6601.14190.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig6601 43..9661 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig6601.14190.1 ID=prot_H-elongata_contig6601.14190.1|Name=mRNA_H-elongata_contig6601.14190.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
MERMYIRREMYLSIMMDRASQGPVIVACPDGGTSIEDLAESNPELILKET
VDVMEGLTDFQAAKIAKHLKLEGPSFDAGKTLLKNMYGMFAEKDCTLVEI
NPLAETADGRVMACDAKLNFDDNAEWRQKETFAFRDFTQEDSREVEAAKY
DLNYIGLTGNIGCM

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013650	ATP-grasp_succ-CoA_synth-type
IPR005809	Succ_CoA_synthase_bsu