prot_H-elongata_contig660.14187.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig660.14187.1
Unique Nameprot_H-elongata_contig660.14187.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length714
Homology
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BLAST of mRNA_H-elongata_contig660.14187.1 vs. uniprot
Match: D7FQX9_ECTSI (Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX9_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 4.260e-14
Identity = 93/277 (33.57%), Postives = 118/277 (42.60%), Query Frame = 0 
Query:  440 RRGTSALALAEPPDFDRAKFVPTSAHHFHTTQVSQGLETLQRRKRRLGQAGDV-ALSSPLSHNHNRHDLHYVNGIRDGRPYDRVGGDSGYSPIAPMEGGSSNPSSLSNRDVWSPEAENWMVQADTDTSQTQPGSGAQLSEPESTKVTDGWRGIASFREGTKRVSPLRLSSTRSPTVTVTPSQQGNEKVASPFPCGEKKTSVVGDQARTFNTSSRRWMV-TPNTVPDPTREVELPLLRLLDG----SRDHSWQ--GRLDGGRSSTSSTKRTRGTEFWD 708
            R+G  AL   E P  D+AKFVP SA HF +TQVSQGLETLQRRKRRL  A D   L  P     +R   H V                         G +      SN  V+    +N   ++  D  +    SG  + +P+        RG++S        SP+RL              +   ++ SP             +AR    SSRRW +  P+T P   RE   PLLRLLDG    + + SW    R+ G R    S KRTRG EFWD
Sbjct:  372 RQGLLAL-TGEVPVADQAKFVPASAQHFRSTQVSQGLETLQRRKRRLYPAEDPECLGLP-----SRGQQHQV-----------------------QPGAADRMLHGSNLPVFGARVDNPTCKSGVD--RPADNSGLWMVQPQEA------RGMSSVNPPAPVSSPVRL--------------RAGSRLGSP-------------EARVLTASSRRWTLPVPSTAPPVNREG-FPLLRLLDGKGKVAPERSWSVDRRIGGARVGQPSPKRTRGVEFWD 583
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig660.14187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQX9_ECTSI4.260e-1433.57Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig660contigH-elongata_contig660:7581..10431 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig660.14187.1mRNA_H-elongata_contig660.14187.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig660 3179..10564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig660.14187.1 ID=prot_H-elongata_contig660.14187.1|Name=mRNA_H-elongata_contig660.14187.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=714bp
MAFSVWQSTVHLMPLGQTAKDGGNLDFLGFHLSSEVVKGVAYGHLHPNTH
KPYEEFDHTEPGPLMPSMPLALLPATNRSYTTPTMSSHSGPATNDVDIDE
PNSMKCVPVLNTSSPPVDVVETCGPTFTRHSSDDPRYRQASELSVQPALA
GAFIDTPFGTDRPALKDLPFPPEGTSQGSTGWSAPAPTRESTNMPGLQGN
QTYGDSTSEASGRWSGRAGCGTSPLSYLGQQHSGLDETENPSNYDGISSL
QLPGTETRIGLGVDTRMRERGRPCATTGFSPAFQASRNDSLQPLLSVEGT
ARSANSPPLRSSGHASGVAWAQRWGVASPLSRGGDWSRPNEQRWGQSSGI
DVNFGTSTEARQVQVRLHGGSSSHAEENSDGGRQSDCSSHWAYDSRTAEV
TALGEGDSVPEDAYHQGSNVGGANANANATNISCGQEGARRGTSALALAE
PPDFDRAKFVPTSAHHFHTTQVSQGLETLQRRKRRLGQAGDVALSSPLSH
NHNRHDLHYVNGIRDGRPYDRVGGDSGYSPIAPMEGGSSNPSSLSNRDVW
SPEAENWMVQADTDTSQTQPGSGAQLSEPESTKVTDGWRGIASFREGTKR
VSPLRLSSTRSPTVTVTPSQQGNEKVASPFPCGEKKTSVVGDQARTFNTS
SRRWMVTPNTVPDPTREVELPLLRLLDGSRDHSWQGRLDGGRSSTSSTKR
TRGTEFWDARLMR*
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