prot_H-elongata_contig65915.14176.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65915.14176.1
Unique Nameprot_H-elongata_contig65915.14176.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length178
Homology
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BLAST of mRNA_H-elongata_contig65915.14176.1 vs. uniprot
Match: D7G0C8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0C8_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 1.860e-55
Identity = 113/176 (64.20%), Postives = 134/176 (76.14%), Query Frame = 0 
Query:    1 MELPVV-FLLKVLNILCGSDELLSSSTGRDLLCRCLADAFEDVPLSETEHSDRRKAGRGESSFEWCFDRLEDFASTVQELPLAVLLVQVMEAVATARVRFLEA---GSGDS-EGGRSMGDA-SLSPHEKLAALCLTLLQRDWSGGDIKFVYKSSTVGMLVRTHLRWAKDPLQALEV 170
            M LP + F LKVL+ILCGSDE+L S  GR++L  CLADAF D  L E+    + +    E+ F  CFD+LEDFASTVQ+LPLAV LVQVMEAVATARVR L A   G G +  GG+  G+   LSPH+KL++LCLTLLQRDWS GD+KFVYKSST+G+LVR HLRWAKDPLQA+EV
Sbjct:  964 MLLPCLDFTLKVLSILCGSDEILGSEAGRNVLGECLADAFYDGDLDESLDGSQNRPAADEA-FVMCFDKLEDFASTVQQLPLAVQLVQVMEAVATARVRCLAAQPDGRGAAARGGQRRGETPELSPHQKLSSLCLTLLQRDWSEGDLKFVYKSSTLGVLVRAHLRWAKDPLQAVEV 1138
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65915.14176.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0C8_ECTSI1.860e-5564.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.466

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65915contigH-elongata_contig65915:72..2970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65915.14176.1mRNA_H-elongata_contig65915.14176.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65915 72..2970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65915.14176.1 ID=prot_H-elongata_contig65915.14176.1|Name=mRNA_H-elongata_contig65915.14176.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
MELPVVFLLKVLNILCGSDELLSSSTGRDLLCRCLADAFEDVPLSETEHS
DRRKAGRGESSFEWCFDRLEDFASTVQELPLAVLLVQVMEAVATARVRFL
EAGSGDSEGGRSMGDASLSPHEKLAALCLTLLQRDWSGGDIKFVYKSSTV
GMLVRTHLRWAKDPLQALEVNRMKKTS*
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